Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000948g0200 Nicotiana tabacum HOM05D009853 ORTHO05D009969 6.0e-126 454.1 222 100.0
Nitab4.5_0029272g0020 Nicotiana tabacum HOM05D009853 ORTHO05D009969 4.4e-84 315.1 197 82.7
CAN.G798.34 Capsicum annuum HOM05D009853 ORTHO05D009969 4.7e-38 162.2 118 73.7
Peaxi162Scf00011g00077 Petunia axillaris HOM05D009853 ORTHO05D009969 3.4e-36 156.0 129 66.7
PGSC0003DMG400033092 Solanum tuberosum HOM05D009853 ORTHO05D009969 2.9e-35 152.9 128 60.9
PGSC0003DMG400026582 Solanum tuberosum HOM05D009853 ORTHO05D009969 4.9e-35 152.1 128 61.7
PGSC0003DMG400016838 Solanum tuberosum HOM05D009853 ORTHO05D009969 5.4e-34 148.7 128 60.2
PGSC0003DMG400024902 Solanum tuberosum HOM05D009853 ORTHO05D009969 5.4e-34 148.7 127 59.8
Nitab4.5_0002698g0090 Nicotiana tabacum HOM05D009853 ORTHO05D009969 1.6e-33 147.1 99 74.7
PGSC0003DMG400026881 Solanum tuberosum HOM05D009853 ORTHO05D009969 2.1e-33 146.7 126 60.3
Solyc01g103870.1 Solanum lycopersicum HOM05D009853 ORTHO05D009969 7.8e-33 144.8 104 70.2
Sopen01g046240 Solanum pennellii HOM05D000600 ORTHO05D000432 1.0e-32 144.4 104 69.2
PGSC0003DMG400016835 Solanum tuberosum HOM05D009853 ORTHO05D009969 3.9e-32 142.5 128 58.6
Sopen01g046270 Solanum pennellii HOM05D000600 ORTHO05D000432 1.1e-31 141.0 101 68.3
PGSC0003DMG400036234 Solanum tuberosum HOM05D009853 ORTHO05D009969 3.6e-30 136.0 125 60.0
Sopen06g027600 Solanum pennellii HOM05D009853 ORTHO05D009969 5.2e-29 132.1 127 55.9
Solyc06g071300.1 Solanum lycopersicum HOM05D009853 ORTHO05D009969 2.0e-28 130.2 123 56.1
Nitab4.5_0002698g0040 Nicotiana tabacum HOM05D009853 ORTHO05D009969 1.1e-26 124.4 92 71.7
PGSC0003DMG400035438 Solanum tuberosum HOM05D009853 ORTHO05D009969 2.6e-20 103.2 100 55.0
Nitab4.5_0000075g0290 Nicotiana tabacum HOM05D009853 ORTHO05D009969 2.2e-19 100.1 90 60.0
PGSC0003DMG400039282 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.2e-17 94.4 100 48.0
Peaxi162Scf01312g00064 Petunia axillaris HOM05D000628 ORTHO05D009969 3.3e-15 86.3 75 58.7
Oeu029234.1 Olea europaea HOM05D011412 ORTHO05D009969 3.6e-14 82.8 110 39.1
Oeu029235.1 Olea europaea HOM05D011412 ORTHO05D009969 3.6e-14 82.8 110 39.1
CSS0019303 Camellia sinensis var. sinensis HOM05D009853 ORTHO05D009969 3.8e-11 72.8 109 38.5
Oeu031750.4 Olea europaea HOM05D041624 ORTHO05D009969 1.1e-10 71.2 73 46.6
Dinv40186 Davidia involucrata HOM05D009853 ORTHO05D009969 1.4e-10 70.9 80 50.0
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 1.9e-10 70.5 52 57.7
Nitab4.5_0003774g0010 Nicotiana tabacum HOM05D038292 ORTHO05D009969 1.9e-10 70.5 94 38.3
vmacro23014 Vaccinium macrocarpon HOM05D011412 ORTHO05D009969 7.1e-10 68.6 91 38.5
Oeu034504.1 Olea europaea HOM05D011412 ORTHO05D009969 9.3e-10 68.2 101 36.6
Rhsim07G0189200 Rhododendron simsii HOM05D009853 ORTHO05D009969 9.3e-10 68.2 65 52.3
Oeu014492.1 Olea europaea HOM05D011412 ORTHO05D009969 2.7e-09 66.6 110 33.6
PGSC0003DMG400018623 Solanum tuberosum HOM05D013339 ORTHO05D009969 3.5e-09 66.2 133 32.3
Actinidia20182 Actinidia chinensis HOM05D011412 ORTHO05D009969 4.6e-09 65.9 56 48.2
Dinv38023 Davidia involucrata HOM05D011412 ORTHO05D009969 4.6e-09 65.9 79 43.0
Oeu029249.1 Olea europaea HOM05D011412 ORTHO05D009969 1.0e-08 64.7 97 34.0
Rhsim08G0027100 Rhododendron simsii HOM05D011412 ORTHO05D009969 1.0e-08 64.7 70 47.1
Solyc05g013370.1 Solanum lycopersicum HOM05D013339 ORTHO05D009969 1.3e-08 64.3 133 30.1
TAR365G0201 Trochodendron aralioides HOM05D000307 ORTHO05D000166 3.9e-08 62.8 93 26.9
Oeu051266.1 Olea europaea HOM05D011412 ORTHO05D009969 8.7e-08 61.6 104 31.7
Actinidia23430 Actinidia chinensis HOM05D006887 ORTHO05D009969 1.1e-07 61.2 89 38.2
Dinv30482 Davidia involucrata HOM05D009853 ORTHO05D009969 1.1e-07 61.2 60 46.7
Sopen05g008160 Solanum pennellii HOM05D013339 ORTHO05D009969 1.1e-07 61.2 61 42.6
PGSC0003DMG400007682 Solanum tuberosum HOM05D013339 ORTHO05D009969 1.1e-07 61.2 70 42.9
AL7G49930 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.5e-07 60.8 116 30.2
CSS0026794 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 1.5e-07 60.8 73 46.6
AT5G39750 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.9e-07 60.5 119 32.8
Carub.0007s3594 Capsella rubella HOM05D006887 ORTHO05D004325 2.5e-07 60.1 116 31.9
Manes.10G129900 Manihot esculenta HOM05D006887 ORTHO05D004325 2.5e-07 60.1 105 31.4
Oeu032521.1 Olea europaea HOM05D011412 ORTHO05D009969 3.3e-07 59.7 96 32.3
Oeu048605.1 Olea europaea HOM05D041624 ORTHO05D009969 3.3e-07 59.7 79 40.5
Oeu048608.1 Olea europaea HOM05D041624 ORTHO05D009969 3.3e-07 59.7 79 40.5
AL7G50550 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 4.3e-07 59.3 116 29.3
DCAR_007526 Daucus carota HOM05D009853 ORTHO05D009969 4.3e-07 59.3 76 36.8
BcaB06g27394 Brassica carinata HOM05D006887 ORTHO05D004325 5.6e-07 58.9 107 29.9
BcaB08g34810 Brassica carinata HOM05D006887 ORTHO05D004325 5.6e-07 58.9 104 30.8
ATR0626G033 Amborella trichopoda HOM05D000307 ORTHO05D000166 7.4e-07 58.5 93 29.0
AL7G50480 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 7.4e-07 58.5 120 34.2
BcaB06g27442 Brassica carinata HOM05D006887 ORTHO05D004325 7.4e-07 58.5 117 29.1
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 9.6e-07 58.2 69 39.1
Rhsim08G0215000 Rhododendron simsii HOM05D011412 ORTHO05D009969 9.6e-07 58.2 79 39.2
Carub.0003s3325 Capsella rubella HOM05D006887 ORTHO05D004325 1.3e-06 57.8 116 31.0
Potri.008G020300 Populus trichocarpa HOM05D015295 ORTHO05D009969 1.3e-06 57.8 99 33.3
BcaB06g27670 Brassica carinata HOM05D006887 ORTHO05D004325 1.6e-06 57.4 56 48.2
BcaB06g27671 Brassica carinata HOM05D006887 ORTHO05D004325 1.6e-06 57.4 94 30.9
Carub.0007s3561 Capsella rubella HOM05D006887 ORTHO05D004325 1.6e-06 57.4 126 30.2
AT5G38740 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.1e-06 57.0 117 31.6
BolC4t26260H Brassica oleracea HOM05D006887 ORTHO05D004325 2.1e-06 57.0 114 32.5
CSS0003429 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 2.1e-06 57.0 62 46.8
CSS0020150 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 2.1e-06 57.0 62 46.8
CSS0039249 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 2.1e-06 57.0 62 46.8
Oeu045757.1 Olea europaea HOM05D011412 ORTHO05D009969 2.1e-06 57.0 96 32.3
Potri.010G238900 Populus trichocarpa HOM05D015295 ORTHO05D009969 2.1e-06 57.0 109 33.0
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 2.8e-06 56.6 63 38.1
BcaB06g27414 Brassica carinata HOM05D006887 ORTHO05D004325 3.6e-06 56.2 74 36.5
A04p12860 Brassica napus HOM05D006887 ORTHO05D004325 3.6e-06 56.2 107 29.9
BraA04t16949Z Brassica rapa HOM05D006887 ORTHO05D004325 3.6e-06 56.2 107 29.9
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 3.6e-06 56.2 63 38.1
Hma1.2p1_0038F.1_g024040 Hydrangea macrophylla HOM05D000307 ORTHO05D000166 3.6e-06 56.2 94 31.9
C04p46750 Brassica napus HOM05D006887 ORTHO05D004325 4.8e-06 55.8 109 33.0
BolC4t26262H Brassica oleracea HOM05D006887 ORTHO05D004325 4.8e-06 55.8 109 33.0
Sabra10G0187100 Salix brachista HOM05D015295 ORTHO05D009969 4.8e-06 55.8 111 32.4
AT5G40220 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 6.2e-06 55.5 99 31.3
BcaB06g27440 Brassica carinata HOM05D006887 ORTHO05D004325 6.2e-06 55.5 59 40.7
BraA04t16959Z Brassica rapa HOM05D006887 ORTHO05D004325 6.2e-06 55.5 110 28.2
CSS0020566 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 6.2e-06 55.5 118 35.6
Cpa.g.sc192.10 Carica papaya HOM05D006887 ORTHO05D004325 6.2e-06 55.5 86 38.4
Oeu032519.1 Olea europaea HOM05D011412 ORTHO05D009969 6.2e-06 55.5 50 42.0
Actinidia09597 Actinidia chinensis HOM05D002537 ORTHO05D002751 8.1e-06 55.1 95 28.4
TAR625G0700 Trochodendron aralioides HOM05D000307 ORTHO05D000166 8.1e-06 55.1 102 29.4


User provided reference genes

Program Settings