Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.0e-248 862.1 464 100.0
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.9e-241 837.0 464 93.8
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 2.5e-230 802.0 464 90.5
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 5.0e-223 777.7 464 88.6
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 4.6e-221 771.2 464 87.7
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 1.4e-220 769.6 467 88.0
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 3.0e-212 741.9 419 89.7
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 8.8e-212 740.3 464 81.5
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 4.8e-210 734.6 468 80.8
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 1.2e-208 729.9 464 81.0
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 3.2e-206 721.8 468 80.8
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 7.2e-206 720.7 481 77.1
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 7.2e-206 720.7 468 82.3
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 7.2e-206 720.7 469 80.8
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.1e-205 719.2 464 76.9
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.1e-205 719.2 465 83.7
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 2.1e-205 719.2 468 82.3
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 2.1e-205 719.2 464 80.2
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 3.6e-205 718.4 468 82.5
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 1.5e-203 713.0 468 80.1
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 9.7e-203 710.3 464 79.5
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 4.8e-202 708.0 465 83.2
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 3.1e-201 705.3 464 76.3
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 2.0e-200 702.6 464 75.4
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 4.5e-200 701.4 464 76.5
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.3e-199 699.9 464 76.9
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 1.5e-198 696.4 464 75.4
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 1.2e-197 693.3 464 75.6
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.2e-197 693.3 467 77.7
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 3.6e-197 691.8 464 78.2
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 3.6e-197 691.8 470 78.3
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 6.1e-197 691.0 464 75.0
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 6.1e-197 691.0 464 75.4
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 1.4e-196 689.9 464 74.8
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.8e-196 689.5 464 74.8
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 2.6e-195 685.6 464 76.1
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 3.4e-195 685.3 470 77.0
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 7.5e-195 684.1 469 77.4
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.3e-194 683.3 464 74.4
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 2.2e-194 682.6 464 76.3
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 1.1e-193 680.2 464 76.7
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 3.1e-193 678.7 466 75.8
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 4.1e-193 678.3 466 74.2
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 4.1e-193 678.3 466 74.2
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 7.0e-193 677.6 464 73.3
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 7.0e-193 677.6 464 72.4
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 9.1e-193 677.2 465 76.3
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 1.6e-192 676.4 464 76.9
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 3.5e-192 675.2 464 76.1
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 4.5e-192 674.9 464 76.1
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 1.3e-191 673.3 464 73.3
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 2.2e-191 672.5 465 76.6
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 3.8e-191 671.8 464 71.6
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.5e-190 669.8 464 73.7
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 3.2e-190 668.7 464 76.1
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 4.2e-190 668.3 460 74.6
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 7.2e-190 667.5 416 79.1
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 7.2e-190 667.5 464 71.8
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 3.6e-189 665.2 491 71.3
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 4.7e-189 664.8 465 73.3
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 4.7e-189 664.8 464 72.4
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.0e-188 663.7 464 71.1
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 3.0e-188 662.1 469 74.6
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 3.0e-188 662.1 464 72.2
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 4.0e-188 661.8 464 72.2
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 1.2e-187 660.2 510 67.6
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 1.2e-187 660.2 425 77.2
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.0e-187 659.4 462 72.7
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 7.5e-187 657.5 465 76.1
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 1.3e-186 656.8 425 76.7
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 1.3e-186 656.8 468 72.6
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 2.2e-186 656.0 465 75.9
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 8.3e-186 654.1 464 72.4
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 8.3e-186 654.1 444 76.4
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 1.1e-185 653.7 467 74.1
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 1.4e-185 653.3 463 72.4
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 1.8e-185 652.9 494 70.2
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 2.4e-185 652.5 418 76.6
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 3.5e-184 648.7 464 72.4
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 3.5e-184 648.7 464 72.4
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 3.5e-184 648.7 464 72.4
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 1.0e-183 647.1 462 70.1
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.0e-183 647.1 465 72.9
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.0e-183 647.1 464 70.3
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 2.3e-183 646.0 465 71.4
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 2.9e-183 645.6 464 71.6
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 1.9e-182 642.9 465 70.5
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 2.5e-182 642.5 464 71.3
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 3.3e-182 642.1 433 74.4
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 4.2e-182 641.7 465 70.3
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 5.6e-182 641.3 464 70.0
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 9.5e-182 640.6 465 72.0
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 2.1e-181 639.4 465 71.8
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.8e-180 636.3 468 71.4
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.0e-180 635.6 423 74.5
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 3.0e-180 635.6 401 77.1
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 4.4e-179 631.7 464 70.7
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 4.4e-179 631.7 489 69.5
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 1.3e-178 630.2 464 69.8
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.7e-178 629.8 464 70.0
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 8.3e-178 627.5 465 72.5
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 2.7e-176 622.5 399 75.7
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.1e-174 617.1 450 68.9
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 4.3e-174 615.1 456 69.1
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 4.7e-173 611.7 464 68.8
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 6.0e-168 594.7 415 72.3
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 1.9e-166 589.7 459 67.1
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 4.3e-166 588.6 460 66.7
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.4e-163 578.9 399 72.9
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.9e-161 573.2 420 66.0
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 9.9e-147 524.2 318 80.5
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 4.2e-145 518.8 382 73.6
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 6.0e-136 488.4 399 59.1
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 2.5e-134 483.0 411 58.9
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 7.9e-128 461.5 402 55.2
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 7.1e-121 438.3 462 51.7
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 3.9e-103 379.4 417 50.6
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 5.7e-102 375.6 261 77.0
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 2.0e-99 367.1 272 64.7
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 5.1e-95 352.4 535 37.4
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 3.1e-76 290.0 188 75.5
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 2.1e-72 277.3 268 60.4
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 8.0e-64 248.8 258 53.1
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 1.0e-63 248.4 258 53.1
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 9.8e-54 215.3 207 58.0
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 1.0e-42 178.7 146 65.1
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.9e-41 174.5 145 62.8
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.6e-40 171.4 122 74.6
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 2.8e-40 170.6 160 61.9
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 7.1e-36 156.0 123 65.9
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.1e-31 142.1 389 28.8
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 6.9e-23 112.8 60 90.0
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.9e-17 94.7 57 82.5
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 3.1e-15 87.4 69 71.0
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 1.2e-14 85.5 59 67.8
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 4.2e-12 77.0 65 67.7


User provided reference genes

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