Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000930g0090 Nicotiana tabacum HOM05D001494 ORTHO05D001364 1.7e-49 199.5 140 100.0
Nitab4.5_0007901g0050 Nicotiana tabacum HOM05D001494 ORTHO05D001364 2.8e-28 129.0 211 58.3
Peaxi162Scf00135g01012 Petunia axillaris HOM05D001494 ORTHO05D001364 3.8e-25 118.6 210 44.8
CAN.G186.69 Capsicum annuum HOM05D001494 ORTHO05D001364 2.1e-20 102.8 218 54.1
VMungo0720G1367 Vigna mungo HOM05D001494 ORTHO05D001364 8.1e-20 100.9 214 42.5
Cc02_g09130 Coffea canephora HOM05D001494 ORTHO05D001364 2.4e-19 99.4 229 38.0
Manes.08G136900 Manihot esculenta HOM05D001494 ORTHO05D001364 2.4e-19 99.4 221 40.7
Phvul.007G189200 Phaseolus vulgaris HOM05D001494 ORTHO05D001364 3.1e-19 99.0 214 40.7
Duzib106G1326 Durio zibethinus HOM05D001494 ORTHO05D001364 6.9e-19 97.8 228 39.0
Glyma.10G164100 Glycine max HOM05D001494 ORTHO05D001364 3.4e-18 95.5 215 40.5
Sopen04g004950 Solanum pennellii HOM05D001494 ORTHO05D001364 7.6e-18 94.4 218 53.2
PGSC0003DMG401025427 Solanum tuberosum HOM05D001494 ORTHO05D001364 2.2e-17 92.8 218 52.8
Haze_04387 Corylus avellana HOM05D001494 ORTHO05D001364 3.8e-17 92.0 103 64.1
Lalb_Chr06g0168171 Lupinus albus HOM05D001494 ORTHO05D001364 3.8e-17 92.0 216 38.0
TWI56G0132 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 4.9e-17 91.7 225 38.2
TWI56G1137 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 4.9e-17 91.7 225 38.2
Cfa006389 Carpinus fangiana HOM05D001494 ORTHO05D001364 6.5e-17 91.3 220 39.1
Ciclev10022144m.g Citrus clementina HOM05D001494 ORTHO05D001364 8.4e-17 90.9 224 38.4
Glyma.20G226500 Glycine max HOM05D001494 ORTHO05D001364 1.4e-16 90.1 215 39.5
QL03p028987 Quercus lobata HOM05D001494 ORTHO05D001364 1.4e-16 90.1 226 38.5
Gorai.007G279600 Gossypium raimondii HOM05D001494 ORTHO05D001364 2.5e-16 89.4 230 37.4
Solyc04g009820.3 Solanum lycopersicum HOM05D001494 ORTHO05D001364 3.2e-16 89.0 215 52.6
Actinidia03298 Actinidia chinensis HOM05D001494 ORTHO05D001364 4.2e-16 88.6 225 39.1
HanXRQChr14g0455321 Helianthus annuus HOM05D001494 ORTHO05D001364 5.5e-16 88.2 214 38.8
Atru.chr2.881 Acer truncatum HOM05D001494 ORTHO05D001364 7.1e-16 87.8 226 37.2
Hma1.2p1_0345F.1_g131270 Hydrangea macrophylla HOM05D001494 ORTHO05D001364 7.1e-16 87.8 220 37.3
Medtr1g080590 Medicago truncatula HOM05D001494 ORTHO05D001364 7.1e-16 87.8 215 38.1
Lalb_Chr06g0171791 Lupinus albus HOM05D001494 ORTHO05D001364 6.0e-15 84.7 87 65.5
Nitab4.5_0002640g0040 Nicotiana tabacum HOM05D001494 ORTHO05D001364 7.9e-15 84.3 213 36.2
TPR.G26642 Trifolium pratense HOM05D001494 ORTHO05D001364 1.0e-14 84.0 215 37.2
Cpa.g.sc162.7 Carica papaya HOM05D001494 ORTHO05D001364 1.8e-14 83.2 229 37.1
MD12G1244500 Malus domestica HOM05D001494 ORTHO05D001364 1.8e-14 83.2 223 35.0
Potri.013G043700 Populus trichocarpa HOM05D001494 ORTHO05D001364 2.3e-14 82.8 224 37.1
PGSC0003DMG400000988 Solanum tuberosum HOM05D001494 ORTHO05D001364 2.3e-14 82.8 222 34.2
Thecc.05G277400 Theobroma cacao HOM05D001494 ORTHO05D001364 2.3e-14 82.8 227 36.6
Potri.019G013100 Populus trichocarpa HOM05D001494 ORTHO05D001364 3.0e-14 82.4 222 37.4
COL.COLO4_15409 Corchorus olitorius HOM05D001494 ORTHO05D001364 5.1e-14 81.6 99 57.6
THA.LOC104802838 Tarenaya hassleriana HOM05D001494 ORTHO05D001364 5.1e-14 81.6 200 36.5
Manes.09G150200 Manihot esculenta HOM05D001494 ORTHO05D001364 6.7e-14 81.3 221 37.1
CSS0050322 Camellia sinensis var. sinensis HOM05D001494 ORTHO05D001364 1.1e-13 80.5 225 35.6
Ca_10032_v3 Cicer arietinum L. HOM05D001494 ORTHO05D001364 1.1e-13 80.5 87 64.4
MD04G1227900 Malus domestica HOM05D001494 ORTHO05D001364 1.5e-13 80.1 223 34.1
Aqoxy5G00296 Aquilegia oxysepala HOM05D001494 ORTHO05D001364 2.5e-13 79.3 89 57.3
MELO3C004407.2 Cucumis melo HOM05D001494 ORTHO05D001364 3.3e-13 79.0 226 35.0
FAN02G4133 Fragaria x ananassa HOM05D001494 ORTHO05D001364 3.3e-13 79.0 217 35.9
FAN05G1638 Fragaria x ananassa HOM05D001494 ORTHO05D001364 3.3e-13 79.0 217 35.9
FAN05G3907 Fragaria x ananassa HOM05D001494 ORTHO05D001364 3.3e-13 79.0 217 35.9
FAN09G0085 Fragaria x ananassa HOM05D001494 ORTHO05D001364 3.3e-13 79.0 217 35.9
FAN14G1685 Fragaria x ananassa HOM05D001494 ORTHO05D001364 3.3e-13 79.0 217 35.9
CAN.G1256.2 Capsicum annuum HOM05D001494 ORTHO05D001364 4.3e-13 78.6 218 35.8
Lalb_Chr21g0311081 Lupinus albus HOM05D001494 ORTHO05D001364 4.3e-13 78.6 216 36.6
Prupe.6G346900 Prunus persica HOM05D001494 ORTHO05D001364 4.3e-13 78.6 223 35.0
CSS0035099 Camellia sinensis var. sinensis HOM05D001494 ORTHO05D001364 7.4e-13 77.8 225 35.1
RcHm_v2.0_Chr3g0450341 Rosa chinensis HOM05D001494 ORTHO05D001364 9.6e-13 77.4 217 35.9
ClCG02G016890 Citrullus lanatus HOM05D001494 ORTHO05D001364 1.3e-12 77.0 225 34.2
Sed0021193 Sechium edule HOM05D001494 ORTHO05D001364 2.8e-12 75.9 225 33.8
FAN14G4019 Fragaria x ananassa HOM05D001494 ORTHO05D001364 4.8e-12 75.1 218 35.3
Sabra13G0040500 Salix brachista HOM05D001494 ORTHO05D001364 4.8e-12 75.1 93 59.1
Sabra19G0017000 Salix brachista HOM05D001494 ORTHO05D001364 4.8e-12 75.1 94 60.6
Sabra19G0026200 Salix brachista HOM05D001494 ORTHO05D001364 4.8e-12 75.1 94 60.6
vmacro20007 Vaccinium macrocarpon HOM05D001494 ORTHO05D001364 4.8e-12 75.1 217 35.9
HanXRQChr08g0217191 Helianthus annuus HOM05D001494 ORTHO05D001364 6.3e-12 74.7 221 35.7
TAR633G0935 Trochodendron aralioides HOM05D001494 ORTHO05D001364 6.3e-12 74.7 228 34.2
TAR633G1765 Trochodendron aralioides HOM05D001494 ORTHO05D001364 6.3e-12 74.7 228 34.2
FvH4_6g02460 Fragaria vesca HOM05D001494 ORTHO05D001364 8.2e-12 74.3 91 58.2
Gorai.013G186300 Gossypium raimondii HOM05D001494 ORTHO05D001364 8.2e-12 74.3 212 35.8
Peaxi162Scf00120g00067 Petunia axillaris HOM05D001494 ORTHO05D001364 8.2e-12 74.3 219 34.2
CiPaw.07G070300 Carya illinoinensis HOM05D001494 ORTHO05D001364 1.1e-11 73.9 228 34.2
Gohir.A13G169000 Gossypium hirsutum HOM05D001494 ORTHO05D001364 1.8e-11 73.2 212 35.4
Lj5g0004761 Lotus japonicus HOM05D001494 ORTHO05D001364 3.1e-11 72.4 77 66.2
Dinv05727 Davidia involucrata HOM05D001494 ORTHO05D001364 5.3e-11 71.6 92 53.3
BcaB04g19626 Brassica carinata HOM05D001494 ORTHO05D001364 6.9e-11 71.2 82 63.4
Nitab4.5_0003799g0020 Nicotiana tabacum HOM05D001494 ORTHO05D001364 6.9e-11 71.2 225 33.3
BcaC04g23724 Brassica carinata HOM05D001494 ORTHO05D001364 9.0e-11 70.9 216 33.8
C09p05340 Brassica napus HOM05D001494 ORTHO05D001364 9.0e-11 70.9 216 33.8
BolC9t53461H Brassica oleracea HOM05D001494 ORTHO05D001364 9.0e-11 70.9 216 33.8
Dinv30122 Davidia involucrata HOM05D001494 ORTHO05D001364 9.0e-11 70.9 228 32.5
Glyma.19G246600 Glycine max HOM05D001494 ORTHO05D001364 9.0e-11 70.9 216 33.8
Gohir.D13G174400 Gossypium hirsutum HOM05D001494 ORTHO05D001364 9.0e-11 70.9 212 35.4
Nn3g19574 Nelumbo nucifera HOM05D001494 ORTHO05D001364 9.0e-11 70.9 220 35.5
THA.LOC104799252 Tarenaya hassleriana HOM05D001494 ORTHO05D001364 1.2e-10 70.5 215 33.0
CsaV3_2G003880 Cucumis sativus L. HOM05D001494 ORTHO05D001364 1.5e-10 70.1 100 52.0
TAR636G3277 Trochodendron aralioides HOM05D001494 ORTHO05D001364 2.0e-10 69.7 228 33.3
Oeu031436.1 Olea europaea HOM05D001494 ORTHO05D001364 2.6e-10 69.3 224 34.8
Gohir.A11G250400 Gossypium hirsutum HOM05D001494 ORTHO05D001364 3.4e-10 68.9 231 34.6
CANSAT54G2344 Cannabis sativa HOM05D001494 ORTHO05D001364 5.9e-10 68.2 223 32.7
Lj1g0018088 Lotus japonicus HOM05D001494 ORTHO05D001364 7.6e-10 67.8 226 35.0
Oeu033257.1 Olea europaea HOM05D001494 ORTHO05D001364 1.7e-09 66.6 223 33.6
TAR406G0006 Trochodendron aralioides HOM05D001494 ORTHO05D001364 2.2e-09 66.2 218 33.5
MSTRG.9010 Avicennia marina HOM05D001494 ORTHO05D001364 2.9e-09 65.9 228 33.3
Eucgr.B02127 Eucalyptus grandis HOM05D001494 ORTHO05D001364 2.9e-09 65.9 215 33.5
Duzib177G0505 Durio zibethinus HOM05D001494 ORTHO05D001364 3.8e-09 65.5 94 56.4
MBI04_g10916_MAGBIO Magnolia biondii HOM05D001494 ORTHO05D001364 5.0e-09 65.1 96 50.0
Psat0s368g0160 Pisum sativum HOM05D001494 ORTHO05D001364 8.5e-09 64.3 211 32.7
AL6G40650 Arabidopsis lyrata HOM05D001494 ORTHO05D001364 1.4e-08 63.5 220 30.5
BcaNung02101 Brassica carinata HOM05D001494 ORTHO05D001364 1.4e-08 63.5 217 31.8
A06p37990 Brassica napus HOM05D001494 ORTHO05D001364 1.4e-08 63.5 217 31.8
A09p04940 Brassica napus HOM05D001494 ORTHO05D001364 1.4e-08 63.5 216 31.9
C07p40240 Brassica napus HOM05D001494 ORTHO05D001364 1.4e-08 63.5 217 31.8
BolC7t44559H Brassica oleracea HOM05D001494 ORTHO05D001364 1.4e-08 63.5 217 31.8
BraA06t26715Z Brassica rapa HOM05D001494 ORTHO05D001364 1.4e-08 63.5 217 31.8
Thhalv10004925m.g Eutrema salsugineum HOM05D001494 ORTHO05D001364 1.4e-08 63.5 219 31.5
TAR365G1012 Trochodendron aralioides HOM05D001494 ORTHO05D001364 1.4e-08 63.5 104 51.9
AT5G28640 Arabidopsis thaliana HOM05D001494 ORTHO05D001364 1.9e-08 63.2 221 30.3
Carub.0006s2591 Capsella rubella HOM05D001494 ORTHO05D001364 1.9e-08 63.2 222 31.5
BcaC03g17754 Brassica carinata HOM05D001494 ORTHO05D001364 2.5e-08 62.8 219 31.5
CiPaw.08G119400 Carya illinoinensis HOM05D001494 ORTHO05D001364 3.2e-08 62.4 103 47.6
C02p57670 Brassica napus HOM05D001494 ORTHO05D001364 4.2e-08 62.0 220 31.8
BolC2t11839H Brassica oleracea HOM05D001494 ORTHO05D001364 4.2e-08 62.0 220 31.8
Gohir.D11G261100 Gossypium hirsutum HOM05D001494 ORTHO05D001364 4.2e-08 62.0 100 52.0
Sp2g20130 Schrenkiella parvula HOM05D001494 ORTHO05D001364 4.2e-08 62.0 221 31.2
arahy.Tifrunner.gnm1.ann1.HK1F5C Arachis hypogaea HOM05D001494 ORTHO05D001364 5.5e-08 61.6 204 31.4
CARHR185230 Cardamine hirsuta HOM05D001494 ORTHO05D001364 5.5e-08 61.6 220 30.9
Aa31LG11G8670 Aethionema arabicum HOM05D001494 ORTHO05D001364 7.2e-08 61.2 216 30.6
BcaNung01726 Brassica carinata HOM05D001494 ORTHO05D001364 7.2e-08 61.2 219 31.1
A02p38330 Brassica napus HOM05D001494 ORTHO05D001364 7.2e-08 61.2 219 32.0
BraA02t08814Z Brassica rapa HOM05D001494 ORTHO05D001364 7.2e-08 61.2 219 32.0
BraA09t36133Z Brassica rapa HOM05D001494 ORTHO05D001364 7.2e-08 61.2 216 31.5
Oeu016031.1 Olea europaea HOM05D001494 ORTHO05D001364 7.2e-08 61.2 70 60.0
BcaB07g34177 Brassica carinata HOM05D001494 ORTHO05D001364 9.3e-08 60.8 219 32.0
Ah.06g192020 Amaranthus hybridus HOM05D001494 ORTHO05D001364 1.2e-07 60.5 82 61.0
Migut.F00821 Erythranthe guttata HOM05D001494 ORTHO05D001364 1.6e-07 60.1 222 32.0
HanXRQChr07g0200601 Helianthus annuus HOM05D001494 ORTHO05D001364 1.6e-07 60.1 211 36.0
Solyc11g006230.3 Solanum lycopersicum HOM05D001494 ORTHO05D001364 1.6e-07 60.1 211 30.8
PSO210G4488 Papaver somniferum HOM05D001494 ORTHO05D001364 3.6e-07 58.9 99 46.5
Hund28885 Selenicereus undatus HOM05D001494 ORTHO05D001364 3.6e-07 58.9 221 31.7
Hund28886 Selenicereus undatus HOM05D001494 ORTHO05D001364 3.6e-07 58.9 221 31.7
Sopen11g002150 Solanum pennellii HOM05D001494 ORTHO05D001364 4.6e-07 58.5 57 64.9
PSO832G0149 Papaver somniferum HOM05D001494 ORTHO05D001364 6.1e-07 58.2 229 32.8
GSVIVG01028287001 Vitis vinifera HOM05D001494 ORTHO05D001364 1.8e-06 56.6 94 46.8
GSVIVG01036262001 Vitis vinifera HOM05D001494 ORTHO05D001364 1.8e-06 56.6 79 53.2
EL10Ac4g09046 Beta vulgaris HOM05D001494 ORTHO05D001364 2.3e-06 56.2 81 56.8
CDE04G0014 Ceratophyllum demersum HOM05D001494 ORTHO05D001364 3.9e-06 55.5 213 31.5
ECA238G3537 Erigeron canadensis HOM05D001494 ORTHO05D001364 3.9e-06 55.5 218 32.1
Eucgr.H04262 Eucalyptus grandis HOM05D001494 ORTHO05D001364 3.9e-06 55.5 99 48.5
SHI18467 Sapria himalayana HOM05D001494 ORTHO05D001364 3.9e-06 55.5 220 30.9
BcaB04g19624 Brassica carinata HOM05D001494 ORTHO05D001364 5.1e-06 55.1 82 53.7
AUR62001062 Chenopodium quinoa HOM05D008025 ORTHO05D001364 8.7e-06 54.3 81 56.8
AUR62004889 Chenopodium quinoa HOM05D001494 ORTHO05D001364 8.7e-06 54.3 81 56.8


User provided reference genes

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