Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000914g0090 Nicotiana tabacum HOM05D004899 ORTHO05D006580 1.9e-174 615.9 349 100.0
Nitab4.5_0003965g0030 Nicotiana tabacum HOM05D004899 ORTHO05D006580 1.6e-165 586.3 369 92.4
PGSC0003DMG400023503 Solanum tuberosum HOM05D004899 ORTHO05D006580 8.8e-156 553.9 394 83.8
Solyc05g054950.2 Solanum lycopersicum HOM05D004899 ORTHO05D006580 7.4e-155 550.8 394 83.5
CAN.G1465.15 Capsicum annuum HOM05D004899 ORTHO05D006580 1.1e-153 547.0 394 82.5
Sopen05g033410 Solanum pennellii HOM05D004899 ORTHO05D006580 2.4e-153 545.8 394 83.0
Peaxi162Scf00015g02911 Petunia axillaris HOM05D004899 ORTHO05D006580 3.1e-153 545.4 394 81.7
CSS0003371 Camellia sinensis var. sinensis HOM05D004899 ORTHO05D006580 7.0e-137 491.1 394 74.6
Dinv06242 Davidia involucrata HOM05D004899 ORTHO05D006580 1.7e-135 486.5 394 74.4
Rhsim09G0133700 Rhododendron simsii HOM05D004899 ORTHO05D006580 4.0e-132 475.3 394 72.6
Actinidia34758 Actinidia chinensis HOM05D004899 ORTHO05D006580 4.4e-131 471.9 394 72.3
MSTRG.8229 Avicennia marina HOM05D004899 ORTHO05D006580 4.4e-131 471.9 394 72.8
FvH4_6g01740 Fragaria vesca HOM05D004899 ORTHO05D006580 1.8e-129 466.5 394 71.6
CANSAT54G0581 Cannabis sativa HOM05D004899 ORTHO05D006580 2.4e-129 466.1 394 71.8
GSVIVG01023441001 Vitis vinifera HOM05D004899 ORTHO05D006580 3.1e-129 465.7 394 71.1
Migut.F01538 Erythranthe guttata HOM05D004899 ORTHO05D006580 7.0e-129 464.5 394 71.6
Prupe.6G350900 Prunus persica HOM05D004899 ORTHO05D006580 7.0e-129 464.5 394 71.1
RcHm_v2.0_Chr3g0449481 Rosa chinensis HOM05D004899 ORTHO05D006580 1.6e-128 463.4 394 70.8
FAN14G2287 Fragaria x ananassa HOM05D004899 ORTHO05D006580 2.0e-128 463.0 394 71.1
FAN14G4075 Fragaria x ananassa HOM05D004899 ORTHO05D006580 2.0e-128 463.0 394 71.1
CiPaw.08G118600 Carya illinoinensis HOM05D004899 ORTHO05D006580 4.5e-128 461.8 394 70.8
FAN05G0331 Fragaria x ananassa HOM05D004899 ORTHO05D006580 4.5e-128 461.8 394 70.8
FAN05G3121 Fragaria x ananassa HOM05D004899 ORTHO05D006580 4.5e-128 461.8 394 70.8
Lj2A44T81 Lonicera japonica HOM05D004899 ORTHO05D006580 7.7e-128 461.1 438 65.8
TAR362G0172 Trochodendron aralioides HOM05D004899 ORTHO05D006580 1.3e-127 460.3 394 70.1
FAN09G4068 Fragaria x ananassa HOM05D004899 ORTHO05D006580 2.2e-127 459.5 394 70.8
Thecc.05G269900 Theobroma cacao HOM05D004899 ORTHO05D006580 5.0e-127 458.4 394 69.8
Cc02_g08720 Coffea canephora HOM05D004899 ORTHO05D006580 6.5e-127 458.0 404 72.3
PGR142G4366 Punica granatum HOM05D004899 ORTHO05D006580 1.9e-126 456.4 394 71.1
Potri.013G047800 Populus trichocarpa HOM05D004899 ORTHO05D006580 5.5e-126 454.9 394 68.3
Duzib106G1539 Durio zibethinus HOM05D004899 ORTHO05D006580 7.2e-126 454.5 394 68.3
Gohir.A11G246300 Gossypium hirsutum HOM05D004899 ORTHO05D006580 2.1e-125 453.0 394 68.5
MD04G1231200 Malus domestica HOM05D004899 ORTHO05D006580 2.1e-125 453.0 395 69.9
Manes.08G140200 Manihot esculenta HOM05D004899 ORTHO05D006580 2.1e-125 453.0 394 70.1
ClCG11G010490 Citrullus lanatus HOM05D004899 ORTHO05D006580 2.8e-125 452.6 394 68.8
Nn1g02931 Nelumbo nucifera HOM05D004899 ORTHO05D006580 2.8e-125 452.6 394 70.1
HanXRQChr08g0216941 Helianthus annuus HOM05D004899 ORTHO05D006580 1.0e-124 450.7 394 67.3
QL03p029772 Quercus lobata HOM05D004899 ORTHO05D006580 1.8e-124 449.9 410 68.3
CsaV3_2G009880 Cucumis sativus L. HOM05D004899 ORTHO05D006580 3.0e-124 449.1 394 68.3
Eucgr.B02154 Eucalyptus grandis HOM05D004899 ORTHO05D006580 4.0e-124 448.7 394 69.5
Gohir.D11G256500 Gossypium hirsutum HOM05D004899 ORTHO05D006580 4.0e-124 448.7 394 68.5
Potri.019G020000 Populus trichocarpa HOM05D004899 ORTHO05D006580 4.0e-124 448.7 394 67.3
Gorai.007G274800 Gossypium raimondii HOM05D004899 ORTHO05D006580 6.8e-124 448.0 394 68.5
MBI07_g12932_MAGBIO Magnolia biondii HOM05D004899 ORTHO05D006580 6.8e-124 448.0 395 69.9
MELO3C008694.2 Cucumis melo HOM05D004899 ORTHO05D006580 3.4e-123 445.7 394 67.8
Sabra19G0032200 Salix brachista HOM05D004899 ORTHO05D006580 3.4e-123 445.7 394 68.8
Sc20g0000690 Simmondsia chinensis HOM05D004899 ORTHO05D006580 3.4e-123 445.7 394 66.5
SalBow6G5574 Salvia bowleyana HOM05D004899 ORTHO05D006580 7.5e-123 444.5 417 67.6
Sed0011238 Sechium edule HOM05D004899 ORTHO05D006580 9.8e-123 444.1 397 67.5
ECA233G1223 Erigeron canadensis HOM05D004899 ORTHO05D006580 2.8e-122 442.6 394 64.2
TWI36G0265 Tripterygium wilfordii HOM05D004899 ORTHO05D006580 5.4e-121 438.3 392 66.3
SGA_v2.0_scaffold426G51496 Striga asiatica HOM05D004899 ORTHO05D006580 9.2e-121 437.6 394 68.8
AT3G04460 Arabidopsis thaliana HOM05D004899 ORTHO05D006580 2.9e-119 432.6 395 62.8
Lsat_1_v5_gn_8_25181 Lactuca sativa HOM05D004899 ORTHO05D006580 3.8e-119 432.2 396 65.9
THA.LOC104820770 Tarenaya hassleriana HOM05D004899 ORTHO05D006580 5.0e-119 431.8 394 61.4
AL3G14410 Arabidopsis lyrata HOM05D004899 ORTHO05D006580 6.6e-119 431.4 395 62.8
Atru.chr2.1001 Acer truncatum HOM05D004899 ORTHO05D006580 1.1e-118 430.6 370 70.8
Carub.0003s0362 Capsella rubella HOM05D004899 ORTHO05D006580 1.5e-118 430.3 394 61.4
Hund22166 Selenicereus undatus HOM05D004899 ORTHO05D006580 1.5e-118 430.3 394 63.5
EL10Ac4g08990 Beta vulgaris HOM05D004899 ORTHO05D006580 2.5e-118 429.5 394 62.9
Sp3g03310 Schrenkiella parvula HOM05D004899 ORTHO05D006580 9.5e-118 427.6 394 61.2
Aqoxy5G00161 Aquilegia oxysepala HOM05D004899 ORTHO05D006580 3.6e-117 425.6 394 67.3
Ciclev10024089m.g Citrus clementina HOM05D004899 ORTHO05D006580 6.1e-117 424.9 370 69.7
Thhalv10020878m.g Eutrema salsugineum HOM05D004899 ORTHO05D006580 1.4e-116 423.7 397 62.0
arahy.Tifrunner.gnm1.ann1.A8VMLZ Arachis hypogaea HOM05D004899 ORTHO05D006580 1.8e-116 423.3 397 67.0
arahy.Tifrunner.gnm1.ann1.VXFY9N Arachis hypogaea HOM05D004899 ORTHO05D006580 2.3e-116 422.9 397 66.8
Glyma.19G247700 Glycine max HOM05D004899 ORTHO05D006580 8.9e-116 421.0 394 67.0
PSO674G0057 Papaver somniferum HOM05D004899 ORTHO05D006580 2.6e-115 419.5 394 66.0
Phvul.006G104800 Phaseolus vulgaris HOM05D004899 ORTHO05D006580 1.7e-114 416.8 394 66.0
VMungo0540G0495 Vigna mungo HOM05D004899 ORTHO05D006580 2.2e-114 416.4 396 66.2
AUR62040914 Chenopodium quinoa HOM05D004899 ORTHO05D006580 3.7e-114 415.6 394 57.9
COL.COLO4_15501 Corchorus olitorius HOM05D004899 ORTHO05D006580 3.7e-114 415.6 378 66.4
Glyma.03G250100 Glycine max HOM05D004899 ORTHO05D006580 3.7e-114 415.6 395 66.6
Aa31LG5G14890 Aethionema arabicum HOM05D004899 ORTHO05D006580 6.4e-114 414.8 394 61.4
A03p33610 Brassica napus HOM05D004899 ORTHO05D006580 3.2e-113 412.5 394 60.4
Ca_11390_v3 Cicer arietinum L. HOM05D004899 ORTHO05D006580 2.0e-112 409.8 394 65.2
BolC3t16350H Brassica oleracea HOM05D004899 ORTHO05D006580 2.7e-112 409.5 394 60.2
BcaC01g04376 Brassica carinata HOM05D004899 ORTHO05D006580 3.5e-112 409.1 394 60.2
C03p40810 Brassica napus HOM05D004899 ORTHO05D006580 3.5e-112 409.1 394 60.2
A05p43040 Brassica napus HOM05D004899 ORTHO05D006580 1.7e-111 406.8 394 57.1
BraA03t12536Z Brassica rapa HOM05D004899 ORTHO05D006580 1.7e-111 406.8 399 59.6
DCAR_023087 Daucus carota HOM05D004899 ORTHO05D006580 6.6e-111 404.8 370 67.6
Zm00001eb046420 Zea mays HOM05D004899 ORTHO05D006580 6.6e-111 404.8 395 64.6
BcaC05g30197 Brassica carinata HOM05D004899 ORTHO05D006580 1.1e-110 404.1 403 57.1
Lj1g0026343 Lotus japonicus HOM05D004899 ORTHO05D006580 1.8e-108 396.7 413 61.5
Os10g0467200 Oryza sativa ssp. japonica HOM05D004899 ORTHO05D006580 3.1e-108 396.0 395 63.0
TPR.G10414 Trifolium pratense HOM05D004899 ORTHO05D006580 4.0e-108 395.6 394 63.5
vmacro10377 Vaccinium macrocarpon HOM05D004899 ORTHO05D006580 4.9e-106 388.7 426 60.3
Ah.06g191810 Amaranthus hybridus HOM05D004899 ORTHO05D006580 1.9e-105 386.7 369 58.3
BcaB04g19333 Brassica carinata HOM05D004899 ORTHO05D006580 3.2e-105 386.0 378 58.7
Lalb_Chr04g0253351 Lupinus albus HOM05D004899 ORTHO05D006580 4.6e-104 382.1 398 61.8
unitig_899.g15065 Utricularia gibba HOM05D004899 ORTHO05D006580 4.6e-104 382.1 387 64.6
CDE05G2618 Ceratophyllum demersum HOM05D004899 ORTHO05D006580 1.3e-103 380.6 398 61.3
ATR0736G049 Amborella trichopoda HOM05D004899 ORTHO05D006580 5.0e-103 378.6 395 60.8
AUR62004828 Chenopodium quinoa HOM05D004899 ORTHO05D006580 4.1e-97 359.0 358 58.9
BcaC05g29943 Brassica carinata HOM05D004899 ORTHO05D006580 5.4e-97 358.6 374 56.1
Cpa.g.sc306.4 Carica papaya HOM05D004899 ORTHO05D006580 1.7e-95 353.6 349 59.6
Medtr1g116380 Medicago truncatula HOM05D004899 ORTHO05D006580 1.1e-89 334.3 360 61.7
Psat0s1997g0040 Pisum sativum HOM05D004899 ORTHO05D006580 2.1e-80 303.5 346 61.0
C05p62800 Brassica napus HOM05D004899 ORTHO05D006580 1.3e-79 300.8 362 54.1
Haze_04413 Corylus avellana HOM05D004899 ORTHO05D006580 2.3e-79 300.1 302 65.6
SMO367G0182 Selaginella moellendorffii HOM05D004899 ORTHO05D006580 4.3e-78 295.8 382 48.4
AagrBONN_evm.TU.Sc2ySwM_228.2413 Anthoceros agrestis HOM05D004899 ORTHO05D006580 1.1e-76 291.2 399 46.1
CARHR078590 Cardamine hirsuta HOM05D004899 ORTHO05D006580 1.1e-73 281.2 248 60.9
Pp3c17_6400 Physcomitrium patens HOM05D004899 ORTHO05D006580 1.6e-69 267.3 398 44.7
HPP92_008536 Vanilla planifolia HOM05D004899 ORTHO05D006580 1.9e-65 253.8 287 61.7
SHI31416 Sapria himalayana HOM05D004899 ORTHO05D006580 3.4e-59 233.0 383 47.8
Mapoly0097s0077 Marchantia polymorpha HOM05D004899 ORTHO05D006580 3.2e-57 226.5 300 47.0
RhsimUnG0045000 Rhododendron simsii HOM05D004899 ORTHO05D006580 2.1e-56 223.8 358 43.9
CANSAT80G2333 Cannabis sativa HOM05D004899 ORTHO05D006580 7.9e-56 221.9 188 63.8
CANSAT80G2786 Cannabis sativa HOM05D004899 ORTHO05D006580 6.7e-55 218.8 188 63.3
Oeu050631.1 Olea europaea HOM05D004899 ORTHO05D006580 1.9e-54 217.2 247 53.4
Hma1.2p1_1336F.1_g276500 Hydrangea macrophylla HOM05D004899 ORTHO05D006580 1.9e-49 200.7 122 82.8
MD12G1249500 Malus domestica HOM05D004899 ORTHO05D006580 1.8e-47 194.1 285 44.6
BolC5t34933H Brassica oleracea HOM05D004899 ORTHO05D006580 2.4e-44 183.7 125 76.0
CBR_g51833 Chara braunii HOM05D004899 ORTHO05D006580 9.1e-44 181.8 538 30.5
MD00G1148800 Malus domestica HOM05D004899 ORTHO05D006580 1.6e-40 171.0 186 52.7
CARHR078600 Cardamine hirsuta HOM05D004899 ORTHO05D006580 1.5e-35 154.5 127 71.7
BraA05t23048Z Brassica rapa HOM05D004899 ORTHO05D006580 4.5e-35 152.9 92 81.5
PRCOL_00005674 Prasinoderma coloniale HOM05D004899 ORTHO05D006580 7.7e-35 152.1 388 30.9
Cre06.g263602 Chlamydomonas reinhardtii HOM05D004899 ORTHO05D006580 8.5e-34 148.7 408 28.9
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 1.1e-33 148.3 152 52.6
TPR.G8890 Trifolium pratense HOM05D001167 ORTHO05D001054 1.6e-32 144.4 138 55.1
MCO09G554 Micromonas commoda HOM05D004899 ORTHO05D006580 2.7e-32 143.7 416 31.7
C01p22380 Brassica napus HOM05D004899 ORTHO05D006580 5.2e-31 139.4 137 53.3
Oeu040904.1 Olea europaea HOM05D004899 ORTHO05D006580 2.2e-29 134.0 71 84.5
MD08G1214200 Malus domestica HOM05D004899 ORTHO05D006580 1.1e-25 121.7 71 81.7
BraA04t16133Z Brassica rapa HOM05D004899 ORTHO05D006580 3.0e-23 113.6 116 50.9
BolC6t38557H Brassica oleracea HOM05D004899 ORTHO05D006580 4.0e-23 113.2 129 48.8
BcaC06g35909 Brassica carinata HOM05D004899 ORTHO05D006580 2.4e-20 104.0 137 43.8
Psat3g057720 Pisum sativum HOM05D004899 ORTHO05D006580 5.5e-17 92.8 50 78.0
Cc06_g01540 Coffea canephora HOM05D004899 ORTHO05D006580 9.4e-17 92.0 100 61.0
SEGI_08581 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 4.7e-16 89.7 139 40.3
SEGI_06182 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 9.8e-14 82.0 48 68.8
BcaC09g50711 Brassica carinata HOM05D004899 ORTHO05D006580 1.3e-13 81.6 121 40.5
Cc06_g14670 Coffea canephora HOM05D004899 ORTHO05D006580 5.4e-12 76.3 43 81.4
Cc05_g01300 Coffea canephora HOM05D004899 ORTHO05D006580 1.3e-10 71.6 78 55.1
SEGI_05516 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 3.3e-09 67.0 81 51.9
Haze_02280 Corylus avellana HOM05D000013 ORTHO05D000689 5.5e-09 66.2 35 88.6
Cc04_g06470 Coffea canephora HOM05D004899 ORTHO05D034818 1.4e-07 61.6 36 80.6
Psat3g113200 Pisum sativum HOM05D004899 ORTHO05D034818 8.9e-07 58.9 30 86.7


User provided reference genes

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