Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 5.7e-209 730.7 377 100.0
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 3.7e-200 701.4 377 95.5
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 1.2e-195 686.4 377 92.8
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 7.9e-195 683.7 377 92.3
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 3.3e-193 678.3 377 91.0
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 3.5e-158 562.0 377 79.3
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 6.2e-139 498.0 378 68.5
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.5e-137 493.4 377 66.3
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 2.9e-136 489.2 378 65.9
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 6.4e-136 488.0 377 65.8
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 1.2e-134 483.8 377 64.7
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 1.6e-134 483.4 377 66.3
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 1.9e-132 476.5 376 65.7
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 2.8e-131 472.6 377 64.7
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 7.6e-129 464.5 376 63.6
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 1.4e-127 460.3 385 62.6
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 2.4e-127 459.5 379 64.9
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 4.1e-127 458.8 377 62.3
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 3.5e-126 455.7 377 60.7
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 6.0e-126 454.9 377 61.8
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 1.3e-125 453.8 382 61.3
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 3.9e-125 452.2 377 61.5
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 5.1e-125 451.8 377 63.4
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 7.3e-124 448.0 380 61.1
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 3.6e-123 445.7 377 60.7
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 3.1e-122 442.6 383 62.7
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 5.2e-122 441.8 377 60.7
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 5.2e-122 441.8 381 61.4
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 6.8e-122 441.4 377 61.8
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 9.9e-121 437.6 378 60.6
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 1.3e-120 437.2 377 63.1
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.7e-120 436.8 379 61.2
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.9e-120 435.3 379 60.4
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 4.9e-120 435.3 379 60.2
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 8.7e-117 424.5 377 59.7
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 1.5e-116 423.7 377 57.8
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 1.5e-116 423.7 377 57.6
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 2.5e-116 422.9 377 59.4
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 3.3e-116 422.5 377 59.7
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 7.3e-116 421.4 379 59.6
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 7.3e-116 421.4 379 60.9
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 7.3e-116 421.4 378 60.1
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 3.6e-115 419.1 379 58.6
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 4.8e-115 418.7 397 58.9
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 5.3e-114 415.2 380 58.7
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 1.5e-113 413.7 378 58.7
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 1.3e-112 410.6 377 59.7
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 1.7e-112 410.2 378 57.4
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 3.8e-112 409.1 381 59.6
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 3.8e-112 409.1 377 58.9
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 3.2e-111 406.0 379 58.0
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 3.2e-111 406.0 377 58.4
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 7.1e-111 404.8 382 56.0
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 9.3e-111 404.4 378 59.5
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 1.6e-110 403.7 377 57.3
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 3.5e-110 402.5 333 60.1
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 2.3e-109 399.8 377 56.0
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 3.9e-109 399.1 376 57.2
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 3.9e-109 399.1 378 56.9
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 6.6e-109 398.3 376 56.1
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.3e-107 394.0 376 55.6
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 1.4e-106 390.6 382 55.2
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 6.9e-106 388.3 381 55.6
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.2e-105 387.5 381 55.6
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 3.4e-105 386.0 382 55.5
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 2.9e-104 382.9 381 55.6
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 3.8e-104 382.5 377 55.2
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 4.9e-104 382.1 377 56.0
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 3.2e-103 379.4 381 54.3
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 3.2e-103 379.4 381 54.9
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.3e-101 373.2 381 53.3
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.3e-101 373.2 381 53.3
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 8.7e-101 371.3 381 53.3
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 3.3e-100 369.4 382 53.1
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 5.6e-100 368.6 399 52.6
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 5.6e-100 368.6 381 52.8
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 1.1e-98 364.4 380 52.4
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 1.1e-98 364.4 390 50.3
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 1.1e-98 364.4 385 52.7
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.8e-98 363.6 377 55.2
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 1.8e-98 363.6 385 53.0
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 3.1e-98 362.8 385 52.5
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 4.0e-98 362.5 377 52.5
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 9.0e-98 361.3 385 52.5
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 1.2e-97 360.9 382 52.4
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 7.6e-97 358.2 324 57.7
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 1.1e-95 354.4 377 54.4
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 4.2e-95 352.4 405 49.9
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 1.3e-88 330.9 387 46.0
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 2.2e-88 330.1 388 48.5
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 4.3e-84 315.8 381 48.6
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 2.7e-78 296.6 168 91.7
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 5.7e-76 288.9 283 55.8
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 2.6e-73 280.0 317 53.6
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 2.2e-72 276.9 257 55.6
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 2.9e-72 276.6 257 54.5
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 7.2e-71 271.9 391 42.7
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 7.9e-70 268.5 199 64.3
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 5.9e-65 252.3 388 39.7
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 2.2e-64 250.4 225 62.7
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 6.5e-56 222.2 381 40.7
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.6e-54 217.6 169 69.2
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 5.2e-53 212.6 380 39.5
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 1.7e-51 207.6 170 62.9
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 2.0e-49 200.7 233 46.8
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.4e-45 188.0 378 36.8
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 2.6e-44 183.7 179 54.2
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 4.9e-43 179.5 166 53.6
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 8.9e-37 158.7 279 34.8
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 3.3e-31 140.2 161 49.7
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 9.5e-31 138.7 82 85.4
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 8.9e-29 132.1 159 44.7
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.2e-28 131.7 160 48.8
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.2e-28 131.7 189 41.3
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.4e-28 129.8 189 41.3
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 1.2e-25 121.7 168 44.6
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 5.0e-24 116.3 142 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.4e-21 108.2 165 34.5
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 8.6e-16 89.0 104 43.3
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.3e-15 85.9 92 46.7
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 3.1e-13 80.5 70 55.7
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 4.9e-11 73.2 81 45.7
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 6.0e-09 66.2 433 22.6
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 6.2e-06 56.2 68 42.6


User provided reference genes

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