Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000855g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 5.1e-66 254.2 124 100.0
Nitab4.5_0000045g0210 Nicotiana tabacum HOM05D009060 ORTHO05D011398 4.2e-52 208.0 124 81.5
Nitab4.5_0002792g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.4e-47 192.2 124 76.6
Nitab4.5_0000559g0270 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.6e-43 178.3 124 72.6
Nitab4.5_0004872g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 9.1e-39 163.7 123 69.1
Nitab4.5_0001334g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.6e-38 162.2 124 65.3
Nitab4.5_0002516g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.9e-37 158.7 124 62.9
Nitab4.5_0002837g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.5e-36 155.6 124 62.1
Nitab4.5_0006479g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.9e-34 148.3 124 62.1
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 7.2e-28 127.5 93 64.5
Sopen03g009380 Solanum pennellii HOM05D000030 ORTHO05D000009 1.6e-27 126.3 93 64.5
Solyc11g150102.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 6.7e-26 120.9 93 61.3
Solyc09g063157.2 Solanum lycopersicum HOM05D000030 ORTHO05D000009 2.2e-24 115.9 93 59.1
Sopen01g026300 Solanum pennellii HOM05D000030 ORTHO05D000009 2.2e-24 115.9 93 59.1
Sopen11g012600 Solanum pennellii HOM05D000030 ORTHO05D000009 2.2e-24 115.9 93 59.1
PGSC0003DMG400042476 Solanum tuberosum HOM05D009060 ORTHO05D011398 3.2e-20 102.1 75 66.7
Sopen10g022460 Solanum pennellii HOM05D000030 ORTHO05D000009 5.5e-20 101.3 99 54.5
Sopen07g007410 Solanum pennellii HOM05D000030 ORTHO05D000009 1.2e-19 100.1 99 54.5
PGSC0003DMG400016410 Solanum tuberosum HOM05D000030 ORTHO05D000009 4.7e-19 98.2 99 52.5
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 5.4e-15 84.7 55 63.6
Sopen12g008930 Solanum pennellii HOM05D000030 ORTHO05D000009 3.5e-14 82.0 93 48.4
Solyc07g049405.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 7.7e-14 80.9 54 61.1
Nitab4.5_0004648g0020 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.1e-12 77.0 36 91.7
Nitab4.5_0008198g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.1e-12 77.0 74 52.7
Nitab4.5_0000133g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.9e-12 76.3 83 50.6
Gorai.013G077200 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.6e-11 73.2 90 43.3
Hma1.2p1_0357F.1_g134210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-11 71.6 70 52.9
Peaxi162Scf00334g00126 Petunia axillaris HOM05D009060 ORTHO05D011398 4.7e-11 71.6 124 35.5
Sopen08g019750 Solanum pennellii HOM05D000030 ORTHO05D000009 1.4e-10 70.1 72 45.8
CSS0048534 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 3.0e-10 68.9 54 51.9
Duzib128G1005 Durio zibethinus HOM05D000030 ORTHO05D000009 3.0e-10 68.9 68 47.1
Manes.02G168901 Manihot esculenta HOM05D000030 ORTHO05D000009 3.0e-10 68.9 83 42.2
Manes.13G119650 Manihot esculenta HOM05D000030 ORTHO05D000009 4.0e-10 68.6 83 41.0
Manes.13G073701 Manihot esculenta HOM05D000030 ORTHO05D000009 5.2e-10 68.2 83 41.0
Nitab4.5_0003152g0080 Nicotiana tabacum HOM05D014912 ORTHO05D011398 5.2e-10 68.2 93 43.0
Manes.02G223133 Manihot esculenta HOM05D000030 ORTHO05D000009 8.8e-10 67.4 85 34.1
Manes.02G223166 Manihot esculenta HOM05D000030 ORTHO05D000009 8.8e-10 67.4 85 34.1
Manes.12G071950 Manihot esculenta HOM05D000030 ORTHO05D000009 8.8e-10 67.4 85 34.1
Manes.16G104301 Manihot esculenta HOM05D000030 ORTHO05D000009 8.8e-10 67.4 85 34.1
Nitab4.5_0000825g0070 Nicotiana tabacum HOM05D011551 ORTHO05D013890 8.8e-10 67.4 87 42.5
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 1.2e-09 67.0 51 47.1
CSS0049125 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 1.2e-09 67.0 54 50.0
Manes.06G026760 Manihot esculenta HOM05D000030 ORTHO05D000009 1.2e-09 67.0 77 39.0
CSS0031978 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 1.5e-09 66.6 54 51.9
CSS0048206 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-09 66.6 54 46.3
Manes.11G097150 Manihot esculenta HOM05D000030 ORTHO05D000031 1.5e-09 66.6 101 34.7
Manes.02G205650 Manihot esculenta HOM05D000030 ORTHO05D000009 2.0e-09 66.2 83 39.8
CSS0017747 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 2.6e-09 65.9 54 51.9
Manes.13G091744 Manihot esculenta HOM05D000030 ORTHO05D000009 2.6e-09 65.9 65 44.6
Nitab4.5_0002608g0010 Nicotiana tabacum HOM05D014912 ORTHO05D011398 3.4e-09 65.5 77 49.4
Manes.01G057350 Manihot esculenta HOM05D000030 ORTHO05D000009 4.4e-09 65.1 75 40.0
Sopen01g017090 Solanum pennellii HOM05D000030 ORTHO05D000009 4.4e-09 65.1 40 70.0
Hma1.2p1_0283F.1_g113600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.5e-09 64.3 63 47.6
CSS0039703 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.3e-08 63.5 55 49.1
ECA234G3092 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.3e-08 63.5 57 42.1
ECA236G3604 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.3e-08 63.5 57 42.1
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 1.3e-08 63.5 54 50.0
Manes.16G057109 Manihot esculenta HOM05D000030 ORTHO05D000009 1.3e-08 63.5 83 39.8
CSS0008746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.7e-08 63.2 55 49.1
Manes.03G090444 Manihot esculenta HOM05D000030 ORTHO05D000009 1.7e-08 63.2 78 39.7
Manes.13G077247 Manihot esculenta HOM05D000030 ORTHO05D000009 1.7e-08 63.2 77 41.6
Nitab4.5_0004608g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 1.7e-08 63.2 95 37.9
Ah.16g101830 Amaranthus hybridus HOM05D000001 ORTHO05D001705 2.2e-08 62.8 82 36.6
CSS0038209 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.2e-08 62.8 75 41.3
Gorai.005G104500 Gossypium raimondii HOM05D000030 ORTHO05D000009 2.2e-08 62.8 91 40.7
Manes.02G217650 Manihot esculenta HOM05D000030 ORTHO05D000009 2.2e-08 62.8 81 39.5
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 2.2e-08 62.8 77 41.6
Gorai.004G207100 Gossypium raimondii HOM05D000030 ORTHO05D000009 2.8e-08 62.4 73 42.5
Nitab4.5_0022785g0010 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.8e-08 62.4 30 83.3
Rhsim06G0136800 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.8e-08 62.4 78 41.0
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.8e-08 62.4 57 49.1
Ah.12g059630 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.7e-08 62.0 82 36.6
Manes.18G145766 Manihot esculenta HOM05D000030 ORTHO05D000009 3.7e-08 62.0 47 51.1
CSS0004161 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.9e-08 61.6 55 47.3
Hma1.2p1_0070F.1_g037660 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.9e-08 61.6 65 43.1
Hma1.2p1_0613F.1_g189240 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.9e-08 61.6 65 43.1
Manes.17G029905 Manihot esculenta HOM05D000030 ORTHO05D000009 6.3e-08 61.2 52 48.1
QL02p078120 Quercus lobata HOM05D000030 ORTHO05D000009 6.3e-08 61.2 54 50.0
QL05p039535 Quercus lobata HOM05D000030 ORTHO05D000009 6.3e-08 61.2 54 50.0
QL08p020585 Quercus lobata HOM05D000030 ORTHO05D000009 6.3e-08 61.2 54 50.0
QL08p047975 Quercus lobata HOM05D000030 ORTHO05D000009 6.3e-08 61.2 54 50.0
CSS0025705 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 8.3e-08 60.8 51 45.1
Gorai.002G232100 Gossypium raimondii HOM05D000030 ORTHO05D000009 8.3e-08 60.8 91 39.6
Gorai.007G156600 Gossypium raimondii HOM05D000030 ORTHO05D000009 8.3e-08 60.8 79 41.8
Gorai.005G140200 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.1e-07 60.5 80 40.0
Hma1.2p1_1137F.1_g260640 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.1e-07 60.5 97 28.9
Manes.17G003183 Manihot esculenta HOM05D000030 ORTHO05D000009 1.4e-07 60.1 58 43.1
QL04p087373 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-07 60.1 57 47.4
QL08p060040 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-07 60.1 57 47.4
QL09p032347 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-07 60.1 57 47.4
QL10p060035 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-07 60.1 57 47.4
Gorai.008G186400 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.8e-07 59.7 80 40.0
QL02p045359 Quercus lobata HOM05D000030 ORTHO05D000009 2.4e-07 59.3 57 47.4
QL04p026250 Quercus lobata HOM05D000030 ORTHO05D000009 2.4e-07 59.3 54 44.4
QL06p050254 Quercus lobata HOM05D000030 ORTHO05D000009 2.4e-07 59.3 97 35.1
CSS0023825 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.1e-07 58.5 48 45.8
Hma1.2p1_0284F.1_g113810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.1e-07 58.5 88 34.1
QL04p060590 Quercus lobata HOM05D000030 ORTHO05D000009 5.4e-07 58.2 63 41.3
QL09p036938 Quercus lobata HOM05D000030 ORTHO05D000009 5.4e-07 58.2 48 52.1
Hma1.2p1_0572F.1_g181290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.0e-07 57.8 90 34.4
QL06p035328 Quercus lobata HOM05D000030 ORTHO05D000009 7.0e-07 57.8 63 41.3
QL10p045275 Quercus lobata HOM05D000030 ORTHO05D000009 7.0e-07 57.8 63 41.3
QL12p026216 Quercus lobata HOM05D000030 ORTHO05D000009 7.0e-07 57.8 63 41.3
Manes.16G038752 Manihot esculenta HOM05D000030 ORTHO05D000009 9.2e-07 57.4 40 55.0
SGA_v2.0_scaffold258G45755 Striga asiatica HOM05D020517 ORTHO05D011398 9.2e-07 57.4 61 45.9
CSS0012832 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-06 57.0 46 45.7
Hma1.2p1_1689F.1_g297600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.2e-06 57.0 88 33.0
Nitab4.5_0004694g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 1.6e-06 56.6 77 37.7
Nitab4.5_0024064g0010 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.6e-06 56.6 30 76.7
QL11p010017 Quercus lobata HOM05D000030 ORTHO05D000009 2.7e-06 55.8 54 42.6
QL11p010287 Quercus lobata HOM05D000030 ORTHO05D000009 2.7e-06 55.8 54 42.6
CSS0032178 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.5e-06 55.5 67 41.8
Nitab4.5_0001298g0080 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.5e-06 55.5 32 75.0
QL11p031591 Quercus lobata HOM05D000030 ORTHO05D000009 3.5e-06 55.5 57 45.6
ECA248G1370 Erigeron canadensis HOM05D007690 ORTHO05D009685 4.5e-06 55.1 57 36.8
Nitab4.5_0011534g0030 Nicotiana tabacum HOM05D011551 ORTHO05D013890 4.5e-06 55.1 78 41.0
Hund00559 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.9e-06 54.7 77 36.4
Nitab4.5_0005833g0010 Nicotiana tabacum HOM05D003038 ORTHO05D003514 7.7e-06 54.3 25 88.0
QL02p032160 Quercus lobata HOM05D000030 ORTHO05D000009 7.7e-06 54.3 54 40.7
QL04p008657 Quercus lobata HOM05D000030 ORTHO05D000009 7.7e-06 54.3 54 40.7
QL08p057179 Quercus lobata HOM05D000030 ORTHO05D000009 7.7e-06 54.3 54 40.7
QL11p054270 Quercus lobata HOM05D000030 ORTHO05D000009 7.7e-06 54.3 54 40.7
TWI34G1469 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 7.7e-06 54.3 50 42.0


User provided reference genes

Program Settings