Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 8.2e-140 500.4 249 100.0
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.0e-134 483.4 249 96.4
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 5.5e-128 461.1 250 90.8
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 4.7e-127 458.0 250 90.0
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 6.1e-127 457.6 250 90.0
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 2.1e-119 432.6 251 87.3
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 8.8e-118 427.2 258 84.9
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 7.5e-93 344.4 254 71.3
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 1.3e-92 343.6 254 71.3
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 7.0e-91 337.8 226 74.8
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 1.2e-90 337.0 235 73.2
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 2.7e-90 335.9 218 78.0
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 3.5e-90 335.5 231 71.9
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 4.6e-90 335.1 254 68.9
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 6.0e-90 334.7 257 70.0
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 7.8e-90 334.3 233 74.2
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.0e-89 334.0 183 86.9
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 2.3e-89 332.8 265 67.5
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 5.0e-89 331.6 260 67.3
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 6.6e-89 331.3 221 73.3
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 6.6e-89 331.3 243 68.3
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 8.6e-89 330.9 228 74.1
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 4.3e-88 328.6 254 68.9
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 9.5e-88 327.4 229 71.2
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.6e-87 326.6 225 72.9
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.6e-87 326.6 225 72.9
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 2.1e-87 326.2 252 67.5
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 2.8e-87 325.9 239 70.7
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 1.1e-86 323.9 192 81.2
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 1.8e-86 323.2 257 67.3
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 6.8e-86 321.2 265 65.7
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 8.9e-86 320.9 217 74.7
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 1.2e-85 320.5 264 63.3
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 2.0e-85 319.7 237 67.1
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 2.0e-85 319.7 253 66.8
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 3.4e-85 318.9 264 64.0
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 3.4e-85 318.9 257 65.0
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 4.4e-85 318.5 222 70.3
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 4.4e-85 318.5 222 70.3
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 4.4e-85 318.5 253 66.8
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 5.8e-85 318.2 258 65.5
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 5.8e-85 318.2 229 68.6
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 7.5e-85 317.8 227 71.4
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 9.9e-85 317.4 192 79.7
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 1.3e-84 317.0 222 70.3
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 1.3e-84 317.0 257 64.6
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.7e-84 316.6 254 64.6
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 2.2e-84 316.2 254 64.6
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 2.9e-84 315.8 248 64.9
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 2.9e-84 315.8 227 69.6
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 2.9e-84 315.8 262 65.3
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 2.9e-84 315.8 222 71.2
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 2.9e-84 315.8 249 67.9
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 3.7e-84 315.5 245 66.1
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 3.7e-84 315.5 254 64.6
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 6.4e-84 314.7 223 68.6
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 6.4e-84 314.7 222 69.4
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 6.4e-84 314.7 222 69.4
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 6.4e-84 314.7 222 69.4
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 6.4e-84 314.7 220 70.9
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 8.3e-84 314.3 265 63.4
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 8.3e-84 314.3 254 64.2
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 1.4e-83 313.5 254 64.6
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 1.4e-83 313.5 254 64.6
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 1.4e-83 313.5 226 69.0
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 1.9e-83 313.2 224 68.8
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 1.9e-83 313.2 263 63.9
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 2.4e-83 312.8 257 64.2
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 4.1e-83 312.0 263 63.1
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 7.1e-83 311.2 225 68.9
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 7.1e-83 311.2 273 62.6
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 9.2e-83 310.8 250 64.4
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.2e-82 310.5 263 63.1
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 6.0e-82 308.1 265 63.0
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 7.8e-82 307.8 200 73.5
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 1.3e-81 307.0 236 68.2
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 1.3e-81 307.0 230 68.7
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 1.3e-81 307.0 258 64.3
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 1.7e-81 306.6 290 58.6
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 2.3e-81 306.2 187 77.0
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 2.3e-81 306.2 222 69.8
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 3.0e-81 305.8 222 68.0
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 1.1e-80 303.9 192 77.6
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.1e-80 303.9 257 63.4
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 1.5e-80 303.5 253 65.6
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 1.9e-80 303.1 274 59.9
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 1.9e-80 303.1 245 63.7
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 1.9e-80 303.1 218 70.6
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 4.3e-80 302.0 217 70.0
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 1.2e-79 300.4 252 63.9
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 1.8e-78 296.6 219 68.0
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 2.6e-77 292.7 173 82.1
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 1.3e-76 290.4 265 58.9
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 1.7e-76 290.0 171 81.3
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 8.4e-76 287.7 219 66.2
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 8.4e-76 287.7 290 55.5
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 4.1e-75 285.4 185 73.5
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 5.4e-75 285.0 249 62.2
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 1.2e-74 283.9 216 66.2
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 2.5e-72 276.2 251 58.2
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 5.2e-70 268.5 137 92.7
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 7.1e-67 258.1 181 70.7
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 7.8e-66 254.6 221 59.7
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 5.6e-64 248.4 218 57.8
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 6.0e-58 228.4 122 88.5
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 9.6e-56 221.1 205 58.5
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 2.7e-50 203.0 209 51.2
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 1.5e-48 197.2 193 52.3
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 8.2e-47 191.4 135 69.6
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 9.0e-46 188.0 180 57.8
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 3.4e-45 186.0 198 51.0
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.5e-37 160.6 175 47.4
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 2.0e-37 160.2 123 58.5
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 5.1e-33 145.6 113 66.4
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 5.7e-32 142.1 111 66.7
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 3.7e-31 139.4 71 90.1
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 1.1e-30 137.9 187 43.3
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 4.7e-26 122.5 61 90.2
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 1.1e-22 111.3 128 50.0
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.3e-20 104.4 81 66.7
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 4.2e-19 99.4 57 80.7
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 2.6e-16 90.1 50 80.0
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 2.8e-15 86.7 113 46.9
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 1.6e-13 80.9 139 40.3
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 4.5e-13 79.3 72 56.9
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 3.8e-12 76.3 114 43.9
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 5.5e-11 72.4 102 42.2
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 9.4e-11 71.6 45 77.8
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 5.2e-09 65.9 62 53.2
arahy.Tifrunner.gnm1.ann1.RQ0K0U Arachis hypogaea HOM05D002734 ORTHO05D003035 7.0e-06 55.5 46 58.7


User provided reference genes

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