Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000759g0080 Nicotiana tabacum HOM05D007833 ORTHO05D009855 2.2e-32 141.7 74 100.0
Nitab4.5_0008797g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 7.8e-30 133.3 74 94.6
CAN.G1682.20 Capsicum annuum HOM05D007833 ORTHO05D009855 6.9e-26 120.2 76 85.5
PGSC0003DMG400020049 Solanum tuberosum HOM05D007833 ORTHO05D009855 1.5e-25 119.0 75 85.3
Sopen06g035690 Solanum pennellii HOM05D007833 ORTHO05D009855 5.4e-23 110.5 68 86.8
Solyc06g084300.1 Solanum lycopersicum HOM05D007833 ORTHO05D009855 5.1e-21 104.0 68 82.4
Peaxi162Scf00783g00321 Petunia axillaris HOM05D007833 ORTHO05D009855 4.0e-18 94.4 67 77.6
Nitab4.5_0001028g0100 Nicotiana tabacum HOM05D007833 ORTHO05D009855 2.0e-17 92.0 74 68.9
Hma1.2p1_0628F.1_g192040 Hydrangea macrophylla HOM05D007833 ORTHO05D009855 7.6e-17 90.1 65 75.4
Nitab4.5_0014943g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 1.3e-16 89.4 74 68.9
Oeu028084.1 Olea europaea HOM05D007833 ORTHO05D009855 6.4e-16 87.0 66 68.2
PGSC0003DMG400001195 Solanum tuberosum HOM05D007833 ORTHO05D009855 6.4e-16 87.0 74 66.2
CSS0012022 Camellia sinensis var. sinensis HOM05D007833 ORTHO05D009855 8.4e-16 86.7 54 79.6
AUR62036454 Chenopodium quinoa HOM05D007833 ORTHO05D009855 1.9e-15 85.5 50 80.0
Lsat_1_v5_gn_9_4081 Lactuca sativa HOM05D007833 ORTHO05D009855 3.2e-15 84.7 67 67.2
Rhsim13G0023900 Rhododendron simsii HOM05D007833 ORTHO05D009855 4.2e-15 84.3 49 83.7
Actinidia00743 Actinidia chinensis HOM05D002055 ORTHO05D002120 7.1e-15 83.6 56 76.8
Thecc.01G281600 Theobroma cacao HOM05D007833 ORTHO05D009855 1.6e-14 82.4 50 80.0
MBI04_g33966_MAGBIO Magnolia biondii HOM05D007833 ORTHO05D009855 2.7e-14 81.6 55 72.7
TWI59G0429 Tripterygium wilfordii HOM05D007833 ORTHO05D009855 2.7e-14 81.6 65 64.6
FAN20G1309 Fragaria x ananassa HOM05D007833 ORTHO05D009855 4.6e-14 80.9 68 63.2
Prupe.8G242800 Prunus persica HOM05D007833 ORTHO05D009855 6.0e-14 80.5 60 68.3
COL.COLO4_09117 Corchorus olitorius HOM05D003232 ORTHO05D003584 7.9e-14 80.1 71 60.6
Haze_04727 Corylus avellana HOM05D001305 ORTHO05D007147 7.9e-14 80.1 54 75.9
ECA247G0823 Erigeron canadensis HOM05D007833 ORTHO05D009855 7.9e-14 80.1 69 65.2
Duzib133G1414 Durio zibethinus HOM05D007833 ORTHO05D009855 1.3e-13 79.3 62 66.1
Nn1g02183 Nelumbo nucifera HOM05D007833 ORTHO05D009855 1.3e-13 79.3 47 83.0
TAR365G0564 Trochodendron aralioides HOM05D007833 ORTHO05D009855 1.8e-13 79.0 68 64.7
EL10Ac7g17570 Beta vulgaris HOM05D007833 ORTHO05D009855 3.0e-13 78.2 51 74.5
Potri.005G208100 Populus trichocarpa HOM05D007833 ORTHO05D009855 3.0e-13 78.2 45 84.4
vmacro02562 Vaccinium macrocarpon HOM05D007833 ORTHO05D009855 3.0e-13 78.2 49 77.6
Gorai.004G081500 Gossypium raimondii HOM05D007833 ORTHO05D009855 5.1e-13 77.4 54 70.4
MD11G1287600 Malus domestica HOM05D007833 ORTHO05D009855 5.1e-13 77.4 58 67.2
Manes.01G208800 Manihot esculenta HOM05D007833 ORTHO05D009855 5.1e-13 77.4 44 84.1
Cfa006126 Carpinus fangiana HOM05D007833 ORTHO05D009855 6.7e-13 77.0 54 74.1
AUR62017101 Chenopodium quinoa HOM05D007833 ORTHO05D009855 6.7e-13 77.0 70 58.6
Dinv11245 Davidia involucrata HOM05D003232 ORTHO05D003584 6.7e-13 77.0 65 63.1
FvH4_2g23750 Fragaria vesca HOM05D007833 ORTHO05D009855 6.7e-13 77.0 66 62.1
FAN24G2170 Fragaria x ananassa HOM05D007833 ORTHO05D009855 6.7e-13 77.0 66 62.1
QL12p022146 Quercus lobata HOM05D007833 ORTHO05D009855 8.7e-13 76.6 68 60.3
Cc01_g19620 Coffea canephora HOM05D007833 ORTHO05D009855 1.1e-12 76.3 69 62.3
Gohir.D08G076800 Gossypium hirsutum HOM05D007833 ORTHO05D009855 1.1e-12 76.3 54 70.4
RcHm_v2.0_Chr6g0291241 Rosa chinensis HOM05D007833 ORTHO05D009855 1.5e-12 75.9 67 61.2
Ah.04g166580 Amaranthus hybridus HOM05D007833 ORTHO05D009855 1.9e-12 75.5 50 74.0
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 2.5e-12 75.1 51 74.5
CANSAT25G0416 Cannabis sativa HOM05D007833 ORTHO05D009855 2.5e-12 75.1 73 58.9
Nn4g26217 Nelumbo nucifera HOM05D007833 ORTHO05D009855 3.3e-12 74.7 51 72.5
Atru.chr5.1399 Acer truncatum HOM05D007833 ORTHO05D009855 4.3e-12 74.3 48 77.1
Gohir.A08G068400 Gossypium hirsutum HOM05D007833 ORTHO05D009855 4.3e-12 74.3 53 67.9
Peaxi162Scf00570g00076 Petunia axillaris HOM05D007833 ORTHO05D009855 4.3e-12 74.3 71 57.7
CiPaw.07G092800 Carya illinoinensis HOM05D007833 ORTHO05D009855 7.4e-12 73.6 52 71.2
MD03G1267100 Malus domestica HOM05D007833 ORTHO05D009855 1.3e-11 72.8 63 65.1
ClCG07G000180 Citrullus lanatus HOM05D007833 ORTHO05D009855 2.1e-11 72.0 62 62.9
Duzib138G0003 Durio zibethinus HOM05D007833 ORTHO05D009855 2.1e-11 72.0 49 73.5
BcaC06g32911 Brassica carinata HOM05D007833 ORTHO05D009855 4.8e-11 70.9 54 63.0
BcaC06g33387 Brassica carinata HOM05D007833 ORTHO05D009855 4.8e-11 70.9 54 63.0
C07p46950 Brassica napus HOM05D000938 ORTHO05D001451 4.8e-11 70.9 54 63.0
BolC7t45211H Brassica oleracea HOM05D000938 ORTHO05D001451 4.8e-11 70.9 54 63.0
Eucgr.K03378 Eucalyptus grandis HOM05D007833 ORTHO05D009855 4.8e-11 70.9 47 78.7
Potri.002G054700 Populus trichocarpa HOM05D007833 ORTHO05D009855 4.8e-11 70.9 59 64.4
Sp5g09880 Schrenkiella parvula HOM05D007833 ORTHO05D009855 6.2e-11 70.5 54 63.0
Ciclev10023167m.g Citrus clementina HOM05D007833 ORTHO05D009855 8.1e-11 70.1 44 77.3
Sc24g0003060 Simmondsia chinensis HOM05D007833 ORTHO05D009855 8.1e-11 70.1 63 61.9
A03p48860 Brassica napus HOM05D000938 ORTHO05D001451 1.8e-10 68.9 54 61.1
BraA03t13987Z Brassica rapa HOM05D000938 ORTHO05D001451 1.8e-10 68.9 54 61.1
SalBow6G6192 Salvia bowleyana HOM05D007833 ORTHO05D009855 3.1e-10 68.2 65 56.9
Sed0020364 Sechium edule HOM05D007833 ORTHO05D009855 4.0e-10 67.8 48 66.7
Migut.N02161 Erythranthe guttata HOM05D007833 ORTHO05D009855 5.3e-10 67.4 67 58.2
Glyma.19G154700 Glycine max HOM05D007833 ORTHO05D009855 5.3e-10 67.4 53 67.9
CARHR162190 Cardamine hirsuta HOM05D007833 ORTHO05D009855 9.0e-10 66.6 57 56.1
Carub.0005s1877 Capsella rubella HOM05D007833 ORTHO05D009855 1.2e-09 66.2 65 52.3
CsaV3_6G037060 Cucumis sativus L. HOM05D007833 ORTHO05D009855 1.2e-09 66.2 59 62.7
AT3G52420 Arabidopsis thaliana HOM05D007833 ORTHO05D009855 1.5e-09 65.9 57 56.1
Phvul.001G149800 Phaseolus vulgaris HOM05D007833 ORTHO05D009855 2.0e-09 65.5 59 64.4
AL5G33070 Arabidopsis lyrata HOM05D007833 ORTHO05D009855 2.6e-09 65.1 52 61.5
Cpa.g.sc52.17 Carica papaya HOM05D007833 ORTHO05D009855 4.5e-09 64.3 50 62.0
Glyma.03G152200 Glycine max HOM05D007833 ORTHO05D009855 4.5e-09 64.3 53 66.0
Potri.017G127350 Populus trichocarpa HOM05D007833 ORTHO05D009855 5.8e-09 63.9 41 78.0
Glyma.17G209300 Glycine max HOM05D007833 ORTHO05D009855 7.6e-09 63.5 62 61.3
PGR044G2487 Punica granatum HOM05D007833 ORTHO05D009855 7.6e-09 63.5 37 78.4
Lj1g0020293 Lotus japonicus HOM05D007833 ORTHO05D009855 1.7e-08 62.4 43 69.8
Psat3g064960 Pisum sativum HOM05D007833 ORTHO05D009855 2.9e-08 61.6 65 53.8
arahy.Tifrunner.gnm1.ann1.1H9ESI Arachis hypogaea HOM05D007833 ORTHO05D009855 4.9e-08 60.8 44 68.2
Migut.K01062 Erythranthe guttata HOM05D007833 ORTHO05D009855 4.9e-08 60.8 44 65.9
Thhalv10010886m.g Eutrema salsugineum HOM05D007833 ORTHO05D009855 4.9e-08 60.8 45 64.4
Medtr7g094710 Medicago truncatula HOM05D007833 ORTHO05D009855 1.1e-07 59.7 52 61.5
TPR.G26603 Trifolium pratense HOM05D007833 ORTHO05D009855 1.4e-07 59.3 43 67.4
Ca_08575_v3 Cicer arietinum L. HOM05D007833 ORTHO05D009855 5.5e-07 57.4 43 67.4
HPP92_007464 Vanilla planifolia HOM05D027844 ORTHO05D009855 7.1e-07 57.0 62 46.8
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 4.6e-06 54.3 47 53.2
HanXRQChr10g0282781 Helianthus annuus HOM05D007833 ORTHO05D009855 4.6e-06 54.3 41 70.7
MSTRG.12567 Avicennia marina HOM05D007833 ORTHO05D009855 6.0e-06 53.9 43 65.1
AUR62036455 Chenopodium quinoa HOM05D045935 ORTHO05D009855 7.9e-06 53.5 39 61.5
unitig_0.g1010 Utricularia gibba HOM05D007833 ORTHO05D009855 7.9e-06 53.5 62 48.4


User provided reference genes

Program Settings