Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 1.3e-213 746.1 372 100.0
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 7.6e-190 667.2 380 87.6
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 2.9e-189 665.2 380 86.8
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 8.4e-189 663.7 385 86.0
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 6.7e-170 600.9 373 83.6
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 2.1e-168 595.9 375 80.3
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 5.7e-137 491.5 373 66.8
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 2.0e-129 466.5 376 64.4
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 9.7e-129 464.2 361 65.7
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 1.4e-127 460.3 358 65.1
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 2.7e-126 456.1 382 63.4
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 4.5e-126 455.3 381 61.7
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 1.3e-125 453.8 381 61.7
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 1.3e-125 453.8 369 64.0
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 1.0e-122 444.1 367 61.3
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 1.4e-122 443.7 373 61.7
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 5.2e-122 441.8 357 63.3
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 1.5e-121 440.3 360 62.5
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 3.4e-121 439.1 353 63.5
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 4.4e-121 438.7 368 62.8
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 7.5e-121 438.0 363 62.3
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 9.8e-121 437.6 367 61.9
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 1.7e-120 436.8 368 62.5
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 3.7e-120 435.6 373 60.9
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 3.7e-120 435.6 360 60.8
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 8.3e-120 434.5 386 60.4
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 1.4e-119 433.7 374 61.0
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 1.8e-119 433.3 373 60.6
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 3.1e-119 432.6 377 61.5
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 4.1e-119 432.2 364 61.0
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 7.0e-119 431.4 366 59.0
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 7.0e-119 431.4 364 61.3
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 9.1e-119 431.0 353 62.6
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 1.6e-118 430.3 372 61.6
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 2.0e-118 429.9 371 61.2
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 2.0e-118 429.9 364 61.0
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 2.0e-118 429.9 359 62.1
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 2.0e-118 429.9 365 60.5
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 3.5e-118 429.1 357 61.3
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 5.9e-118 428.3 388 58.5
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 7.7e-118 427.9 364 61.0
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 2.2e-117 426.4 371 61.2
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 3.8e-117 425.6 357 62.7
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 5.0e-117 425.2 379 58.8
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 1.1e-116 424.1 359 62.4
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 1.1e-116 424.1 368 60.1
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 1.5e-116 423.7 371 60.1
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 1.5e-116 423.7 379 58.8
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 1.9e-116 423.3 375 61.6
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 3.2e-116 422.5 360 58.6
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 4.2e-116 422.2 376 60.1
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 1.2e-115 420.6 373 60.3
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.2e-115 420.6 354 61.9
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 4.7e-115 418.7 356 60.4
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 4.7e-115 418.7 360 58.3
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 1.0e-114 417.5 380 56.1
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 3.0e-114 416.0 348 61.8
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 4.0e-114 415.6 364 59.6
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 5.2e-114 415.2 341 61.6
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 6.8e-114 414.8 373 58.4
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 6.8e-114 414.8 373 58.4
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 1.2e-113 414.1 374 57.0
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 1.5e-113 413.7 381 58.8
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 3.4e-113 412.5 362 59.4
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 4.4e-113 412.1 340 60.9
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 5.7e-113 411.8 372 59.7
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 9.8e-113 411.0 355 60.0
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 1.3e-112 410.6 366 57.7
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 1.3e-112 410.6 359 58.8
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 1.7e-112 410.2 377 57.8
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 1.7e-112 410.2 374 59.1
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.7e-112 410.2 351 60.4
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 1.4e-111 407.1 367 58.0
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 9.2e-111 404.4 380 57.6
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 1.2e-110 404.1 363 57.6
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 1.2e-110 404.1 395 56.7
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 1.6e-110 403.7 380 56.3
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 4.5e-110 402.1 385 55.8
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 4.5e-110 402.1 360 58.6
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 7.8e-110 401.4 362 58.0
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 7.8e-110 401.4 364 59.1
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 1.3e-109 400.6 367 56.9
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 9.5e-108 394.4 374 57.2
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 4.7e-107 392.1 363 56.7
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 5.7e-105 385.2 369 53.7
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 1.1e-103 380.9 369 55.8
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 1.4e-103 380.6 368 56.0
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 5.9e-102 375.2 340 55.3
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 7.8e-102 374.8 365 52.6
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 3.3e-100 369.4 356 54.8
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 1.8e-98 363.6 375 53.6
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 2.2e-96 356.7 369 53.4
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 1.9e-92 343.6 478 41.2
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 2.1e-91 340.1 302 57.9
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 2.2e-88 330.1 316 55.1
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 3.2e-87 326.2 347 49.3
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 5.2e-82 308.9 375 49.6
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 2.6e-81 306.6 362 48.6
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 5.8e-81 305.4 320 51.6
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 3.1e-74 283.1 565 33.3
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 4.0e-74 282.7 180 79.4
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 6.9e-74 282.0 357 46.5
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 6.4e-72 275.4 349 44.1
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 1.0e-69 268.1 403 38.7
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 3.9e-69 266.2 335 48.4
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 7.3e-68 261.9 215 61.9
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 4.0e-66 256.1 427 37.2
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.6e-65 253.4 405 36.3
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.7e-64 250.8 404 36.1
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 1.6e-59 234.2 155 71.0
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 6.2e-59 232.3 154 70.8
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 2.9e-56 223.4 262 48.5
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 1.1e-55 221.5 145 77.2
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 4.6e-54 216.1 374 34.2
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 4.3e-52 209.5 374 32.6
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 3.4e-49 199.9 117 82.1
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 4.3e-36 156.4 105 75.2
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 9.7e-36 155.2 246 37.8
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 1.3e-24 118.2 127 50.4
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.6e-17 94.0 134 40.3
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 1.5e-15 88.2 272 30.5
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 1.2e-12 78.6 81 55.6
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 4.8e-11 73.2 68 50.0


User provided reference genes

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