Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 7.2e-156 553.9 287 100.0
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 4.4e-137 491.5 279 91.0
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 4.9e-136 488.0 279 89.6
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.8e-135 486.1 285 90.5
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 5.4e-135 484.6 279 89.2
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 1.1e-127 460.3 279 82.1
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 1.0e-125 453.8 279 83.5
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 1.7e-125 453.0 277 81.6
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 8.6e-125 450.7 279 80.3
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 1.1e-124 450.3 279 80.3
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 1.2e-123 446.8 279 79.6
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 2.8e-123 445.7 279 80.3
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 1.2e-121 440.3 279 79.2
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 1.5e-121 439.9 278 79.5
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 3.4e-121 438.7 279 78.9
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 4.4e-121 438.3 279 79.6
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 5.8e-121 438.0 279 78.9
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 2.2e-120 436.0 279 77.1
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 2.9e-120 435.6 279 78.1
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 3.7e-120 435.3 279 78.1
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 3.7e-120 435.3 279 78.5
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 6.4e-120 434.5 277 76.5
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 6.4e-120 434.5 279 76.7
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 1.1e-119 433.7 279 77.1
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 1.1e-119 433.7 273 80.6
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 1.4e-119 433.3 273 78.4
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.9e-119 433.0 279 76.7
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 1.9e-119 433.0 279 76.7
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 3.2e-119 432.2 279 76.3
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 4.1e-119 431.8 279 78.9
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 5.4e-119 431.4 279 75.6
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 9.2e-119 430.6 279 78.1
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.2e-118 430.3 279 75.6
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 1.6e-118 429.9 278 78.8
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.6e-118 429.9 279 75.6
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.1e-118 429.5 275 76.7
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 3.5e-118 428.7 279 78.1
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 7.8e-118 427.6 279 76.7
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.8e-118 427.6 279 75.3
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 1.0e-117 427.2 279 76.0
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 1.3e-117 426.8 279 77.1
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 2.3e-117 426.0 279 77.8
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 3.9e-117 425.2 279 74.9
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 8.6e-117 424.1 273 77.7
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 2.5e-116 422.5 279 74.2
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 3.3e-116 422.2 266 78.2
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 4.3e-116 421.8 279 72.8
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 4.3e-116 421.8 273 76.6
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 5.6e-116 421.4 279 76.0
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 5.6e-116 421.4 279 75.3
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 7.3e-116 421.0 279 73.8
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 9.5e-116 420.6 279 72.4
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 9.5e-116 420.6 238 90.8
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.2e-115 420.2 279 75.3
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 1.6e-115 419.9 279 75.6
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 2.1e-115 419.5 279 76.0
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 2.8e-115 419.1 279 75.3
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 3.6e-115 418.7 282 74.5
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 3.6e-115 418.7 279 73.1
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 8.1e-115 417.5 279 75.6
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 1.8e-114 416.4 292 74.3
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 2.3e-114 416.0 279 73.5
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 5.2e-114 414.8 279 73.1
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 5.2e-114 414.8 279 71.3
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 6.8e-114 414.5 271 76.0
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 8.9e-114 414.1 279 73.8
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 1.2e-113 413.7 279 74.6
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 2.0e-113 412.9 279 75.3
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 4.4e-113 411.8 273 74.0
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 1.3e-112 410.2 279 74.2
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 4.9e-112 408.3 290 69.0
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 4.9e-112 408.3 279 74.2
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 6.4e-112 407.9 279 74.2
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 6.4e-112 407.9 310 71.0
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 1.9e-111 406.4 280 72.9
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 3.2e-111 405.6 271 74.9
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 4.1e-111 405.2 279 70.6
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 4.1e-111 405.2 287 71.8
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 4.1e-111 405.2 279 69.9
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 5.4e-111 404.8 275 73.1
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 1.6e-110 403.3 279 71.3
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 4.6e-110 401.7 283 71.0
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 6.0e-110 401.4 338 64.5
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 1.0e-109 400.6 301 68.1
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 1.1e-108 397.1 279 73.8
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 5.6e-108 394.8 279 69.9
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 9.5e-108 394.0 280 71.1
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 4.7e-107 391.7 279 70.6
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 5.2e-106 388.3 280 70.0
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 5.2e-106 388.3 279 69.9
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 5.2e-106 388.3 244 79.9
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 6.8e-106 387.9 278 70.1
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 8.9e-106 387.5 279 72.4
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 1.2e-105 387.1 280 70.0
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 2.0e-105 386.3 280 68.9
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 2.6e-105 386.0 275 71.3
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 7.6e-105 384.4 279 71.0
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 1.3e-104 383.6 280 68.6
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 2.9e-104 382.5 280 69.6
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 1.1e-103 380.6 283 68.2
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 3.2e-103 379.0 283 68.2
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 7.1e-103 377.9 283 68.6
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 9.2e-103 377.5 280 67.5
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 9.2e-103 377.5 280 68.2
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 9.2e-103 377.5 283 67.5
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 1.2e-102 377.1 279 67.7
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 3.5e-102 375.6 315 61.6
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 6.0e-102 374.8 246 74.0
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 1.0e-101 374.0 283 67.8
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 1.0e-101 374.0 283 67.8
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 1.7e-101 373.2 283 67.8
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 2.3e-101 372.9 283 67.5
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 2.3e-101 372.9 283 67.5
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 2.3e-101 372.9 283 66.8
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 3.9e-101 372.1 283 67.8
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 5.1e-101 371.7 280 68.2
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 5.1e-101 371.7 284 69.4
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 6.6e-101 371.3 283 66.1
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 8.7e-101 370.9 276 68.5
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 3.3e-100 369.0 279 66.3
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 3.3e-100 369.0 279 66.3
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 5.6e-100 368.2 275 69.1
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 9.6e-100 367.5 279 68.5
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 9.6e-100 367.5 276 68.5
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 9.6e-100 367.5 279 67.4
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 1.1e-98 364.0 273 68.1
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 9.0e-98 360.9 279 67.0
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 6.4e-96 354.8 278 62.9
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 5.4e-95 351.7 279 66.3
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 5.4e-95 351.7 279 66.3
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 7.1e-95 351.3 279 66.3
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 1.0e-93 347.4 280 64.6
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 2.3e-93 346.3 282 66.7
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 8.7e-93 344.4 303 60.7
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 3.3e-92 342.4 202 82.7
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 2.4e-90 336.3 247 68.8
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 1.2e-89 334.0 280 58.6
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 1.6e-86 323.6 338 56.2
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 1.6e-86 323.6 202 75.7
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 3.5e-86 322.4 263 63.5
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.3e-85 320.5 255 67.5
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 2.5e-84 316.2 266 60.9
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 6.2e-83 311.6 212 70.3
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 5.8e-81 305.1 256 63.7
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 6.0e-78 295.0 246 64.2
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 7.6e-73 278.1 264 57.2
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 4.8e-67 258.8 280 51.8
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 3.2e-63 246.1 202 55.9
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.3e-51 207.6 280 48.6
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 6.3e-51 205.3 120 80.0
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.5e-49 200.7 327 42.5
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 7.2e-47 191.8 162 58.0
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 3.6e-46 189.5 163 57.1
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.0e-45 188.0 216 56.0
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 2.6e-44 183.3 268 43.3
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 3.7e-43 179.5 162 57.4
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 1.1e-42 177.9 122 70.5
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 2.8e-35 153.3 167 51.5
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 1.0e-29 134.8 85 71.8
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.5e-28 128.6 283 37.1
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 1.1e-26 124.8 318 33.3
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.5e-23 114.4 66 87.9
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 4.2e-23 112.8 120 45.8
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 9.5e-23 111.7 227 31.7
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 2.8e-22 110.2 190 38.9
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.2e-19 100.5 94 52.1
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.4e-18 97.8 171 39.8
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.2e-14 84.7 47 89.4
Actinidia31513 Actinidia chinensis HOM05D004377 ORTHO05D005168 3.0e-08 63.5 65 52.3


User provided reference genes

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