Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.3e-63 245.4 171 100.0
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 8.3e-59 230.7 166 95.8
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.3e-56 222.6 166 74.1
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 2.1e-54 216.1 164 75.0
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 1.3e-51 206.8 164 72.6
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 1.2e-49 200.3 164 71.3
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 6.0e-49 198.0 164 68.3
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 2.3e-48 196.1 164 70.1
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 4.3e-47 191.8 162 67.9
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.6e-47 190.7 162 72.2
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 8.1e-46 187.6 162 66.0
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.4e-45 186.8 162 56.8
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 8.9e-45 184.1 162 56.2
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 7.6e-44 181.0 162 55.6
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 1.5e-39 166.8 162 50.0
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.2e-36 157.1 162 56.8
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 3.4e-36 155.6 164 47.0
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 4.4e-36 155.2 162 48.1
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 9.9e-36 154.1 164 69.5
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 9.9e-36 154.1 164 54.3
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 9.9e-36 154.1 164 54.3
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.3e-35 153.7 164 47.0
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.7e-35 153.3 164 47.0
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 3.8e-35 152.1 162 45.1
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 6.4e-35 151.4 164 56.7
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.1e-34 150.6 164 45.1
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 1.4e-34 150.2 162 69.1
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.4e-34 150.2 162 62.3
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 3.2e-34 149.1 162 67.9
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 5.4e-34 148.3 169 43.2
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.2e-33 147.1 164 67.1
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 1.2e-33 147.1 160 46.9
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 1.2e-33 147.1 162 52.5
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 3.5e-33 145.6 162 49.4
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 7.8e-33 144.4 162 43.2
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.0e-32 144.1 162 68.5
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.3e-32 143.7 162 67.9
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.3e-32 143.7 162 67.9
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 1.7e-32 143.3 162 68.5
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.3e-32 142.9 165 49.7
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 3.9e-32 142.1 162 70.4
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 6.6e-32 141.4 162 42.0
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 6.6e-32 141.4 162 71.0
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 6.6e-32 141.4 162 71.0
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 8.7e-32 141.0 166 42.2
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 1.1e-31 140.6 165 53.3
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 1.1e-31 140.6 162 46.3
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 1.9e-31 139.8 164 46.3
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 4.3e-31 138.7 162 39.5
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 5.6e-31 138.3 162 44.4
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 5.6e-31 138.3 166 43.4
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 7.3e-31 137.9 164 42.1
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 9.6e-31 137.5 162 40.7
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 9.6e-31 137.5 162 40.7
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 9.6e-31 137.5 164 50.6
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 1.6e-30 136.7 162 40.7
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 1.6e-30 136.7 163 45.4
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 1.6e-30 136.7 162 48.1
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 1.6e-30 136.7 162 40.1
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 1.6e-30 136.7 162 40.1
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.8e-30 136.0 165 64.2
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 3.6e-30 135.6 162 63.6
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.6e-30 135.6 165 63.6
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 4.8e-30 135.2 162 63.0
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 4.8e-30 135.2 162 63.0
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.8e-30 135.2 162 40.1
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 8.1e-30 134.4 165 39.4
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 8.1e-30 134.4 164 39.0
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.1e-29 134.0 164 48.8
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.4e-29 133.7 168 40.5
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.8e-29 133.3 162 39.5
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 2.4e-29 132.9 162 63.0
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 2.4e-29 132.9 162 64.2
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.4e-29 132.9 162 39.5
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 3.1e-29 132.5 162 63.0
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 4.0e-29 132.1 164 40.2
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 4.0e-29 132.1 162 62.3
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 5.3e-29 131.7 161 41.6
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 5.3e-29 131.7 162 39.5
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 6.9e-29 131.3 164 49.4
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 6.9e-29 131.3 164 40.2
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 9.0e-29 131.0 165 61.8
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 1.2e-28 130.6 164 62.8
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 1.2e-28 130.6 164 40.2
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 1.5e-28 130.2 162 61.1
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.5e-28 130.2 162 61.1
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.5e-28 130.2 164 53.0
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 2.0e-28 129.8 162 38.9
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 2.6e-28 129.4 162 60.5
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 2.6e-28 129.4 162 63.6
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 3.4e-28 129.0 164 47.0
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 3.4e-28 129.0 162 38.9
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 3.4e-28 129.0 164 37.2
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 3.4e-28 129.0 164 38.4
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 3.4e-28 129.0 164 38.4
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 4.5e-28 128.6 164 56.1
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 5.8e-28 128.3 162 39.5
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.8e-28 128.3 162 41.4
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 7.6e-28 127.9 164 44.5
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 7.6e-28 127.9 167 43.1
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 9.9e-28 127.5 164 60.4
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 9.9e-28 127.5 164 59.8
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 9.9e-28 127.5 164 60.4
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.7e-27 126.7 164 37.8
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 2.9e-27 125.9 164 39.6
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 3.8e-27 125.6 164 36.0
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 8.4e-27 124.4 162 41.4
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 8.4e-27 124.4 162 37.7
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 1.1e-26 124.0 164 39.0
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.1e-26 124.0 166 38.6
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 1.9e-26 123.2 164 37.2
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 1.9e-26 123.2 164 37.2
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 4.2e-26 122.1 164 37.8
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 5.4e-26 121.7 161 42.2
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 5.4e-26 121.7 162 35.8
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 2.1e-25 119.8 164 40.9
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 2.1e-25 119.8 164 36.6
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.7e-25 119.4 164 44.5
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.7e-25 119.4 164 37.2
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 3.5e-25 119.0 164 34.1
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 3.5e-25 119.0 164 36.0
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 4.6e-25 118.6 164 34.1
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 4.6e-25 118.6 163 36.8
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 4.6e-25 118.6 165 38.2
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.3e-24 117.1 161 39.8
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 2.3e-24 116.3 148 41.2
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 2.3e-24 116.3 163 38.0
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 2.3e-24 116.3 165 47.3
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 5.1e-24 115.2 162 39.5
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 6.7e-24 114.8 166 36.7
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 6.7e-24 114.8 166 36.1
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 6.7e-24 114.8 166 36.1
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 1.9e-23 113.2 67 73.1
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.9e-23 113.2 166 38.0
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 4.3e-23 112.1 166 36.1
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 7.4e-23 111.3 167 32.3
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 9.6e-23 110.9 171 36.8
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.3e-22 110.5 164 33.5
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.6e-22 110.2 164 33.5
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 1.6e-22 110.2 167 30.5
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.4e-21 107.1 164 31.7
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 1.7e-19 100.1 68 60.3
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.9e-19 99.4 135 40.0
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 4.2e-18 95.5 68 58.8
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 3.3e-15 85.9 170 26.5
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 9.6e-15 84.3 167 36.5
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 9.6e-15 84.3 167 36.5
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.1e-14 83.2 64 51.6
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 4.1e-13 79.0 170 26.5
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.3e-13 78.6 165 29.7
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 3.4e-12 75.9 66 45.5
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.4e-12 75.9 65 46.2
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.5e-12 75.5 65 46.2
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.8e-12 75.1 65 46.2
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 5.8e-12 75.1 163 28.2
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 7.6e-12 74.7 165 26.7
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 1.3e-11 73.9 65 47.7
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 1.3e-11 73.9 165 25.5
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.7e-11 73.6 65 47.7
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 2.5e-10 69.7 65 49.2
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 6.1e-09 65.1 51 58.8
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.3e-08 63.9 149 26.2
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 3.7e-06 55.8 53 49.1


User provided reference genes

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