Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.5e-222 774.6 493 100.0
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.0e-190 669.5 495 80.0
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 7.3e-156 554.7 520 71.5
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 1.3e-149 533.9 522 67.8
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.2e-142 510.8 558 61.5
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.8e-138 496.9 444 72.5
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 4.4e-129 465.7 505 63.6
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.2e-123 447.6 515 55.3
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.9e-117 426.0 510 59.6
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 6.2e-115 418.7 508 50.8
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 1.8e-114 417.2 508 50.2
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.5e-108 397.5 505 48.5
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.6e-108 395.6 565 50.4
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 3.8e-96 356.3 340 60.0
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 4.6e-94 349.4 377 51.5
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 3.9e-93 346.3 335 54.6
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.6e-91 340.9 325 53.8
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 3.7e-91 339.7 292 58.2
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 4.8e-91 339.3 337 53.7
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.4e-90 337.8 342 56.4
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 6.9e-90 335.5 363 61.4
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.2e-89 334.7 327 54.1
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.6e-89 333.6 339 57.8
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 3.4e-89 333.2 343 52.2
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 3.8e-88 329.7 326 60.4
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 9.4e-87 325.1 343 64.1
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 9.4e-87 325.1 334 54.5
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 2.1e-86 323.9 289 70.6
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 4.6e-86 322.8 334 61.1
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 1.4e-85 321.2 376 46.3
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 2.3e-85 320.5 341 49.6
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 3.9e-85 319.7 291 56.7
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 5.1e-85 319.3 350 60.0
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 6.7e-85 318.9 322 53.7
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.1e-84 318.2 328 51.2
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 7.4e-84 315.5 325 52.9
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 1.7e-83 314.3 321 50.8
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.7e-83 314.3 434 55.8
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 2.2e-83 313.9 323 50.8
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 9.1e-82 308.5 323 51.7
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.0e-81 307.4 324 47.5
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 2.6e-81 307.0 322 49.1
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 4.5e-81 306.2 324 47.2
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 5.9e-81 305.8 482 39.6
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.0e-80 305.1 330 59.4
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.0e-80 305.1 323 59.4
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.3e-80 304.7 326 50.3
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 1.7e-80 304.3 375 55.7
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.2e-80 303.9 324 46.9
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 2.2e-80 303.9 337 47.5
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.9e-80 303.5 337 52.5
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 5.0e-80 302.8 336 58.0
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 5.0e-80 302.8 289 52.2
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 5.0e-80 302.8 353 56.1
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 5.0e-80 302.8 323 46.4
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 6.5e-80 302.4 324 46.6
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 6.5e-80 302.4 291 52.2
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 1.1e-79 301.6 316 63.0
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 1.4e-79 301.2 339 58.4
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 1.9e-79 300.8 335 46.6
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 1.9e-79 300.8 293 49.5
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 2.5e-79 300.4 342 46.5
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 5.5e-79 299.3 336 58.3
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 7.2e-79 298.9 331 48.3
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.6e-78 297.7 339 46.6
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 1.6e-78 297.7 341 56.3
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 2.1e-78 297.4 338 47.0
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 6.1e-78 295.8 322 59.9
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 7.9e-78 295.4 335 45.7
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.0e-77 295.0 322 56.2
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 1.0e-77 295.0 330 51.8
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 3.0e-77 293.5 323 47.4
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 3.9e-77 293.1 323 49.8
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 5.1e-77 292.7 323 46.4
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 5.1e-77 292.7 292 53.1
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.1e-76 291.6 296 49.7
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 2.0e-76 290.8 455 43.3
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.7e-76 289.3 292 51.0
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 7.4e-76 288.9 291 57.4
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 9.7e-76 288.5 292 52.7
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.3e-75 288.1 297 61.6
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.3e-75 288.1 297 62.0
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 2.2e-75 287.3 291 54.3
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 2.8e-75 287.0 194 71.6
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.7e-75 286.6 291 62.5
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 6.3e-75 285.8 342 43.9
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 8.2e-75 285.4 461 39.0
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.1e-74 285.0 469 37.5
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 1.4e-74 284.6 484 45.7
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.4e-74 284.6 288 51.7
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.4e-74 284.6 291 49.5
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 1.8e-74 284.3 503 44.3
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 5.3e-74 282.7 323 57.3
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 7.0e-74 282.3 376 41.8
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 9.1e-74 282.0 338 50.9
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 2.0e-73 280.8 326 44.5
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 2.0e-73 280.8 343 42.6
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 2.6e-73 280.4 289 47.8
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 2.6e-73 280.4 342 44.4
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 4.5e-73 279.6 470 43.4
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 4.5e-73 279.6 382 41.4
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 4.5e-73 279.6 322 47.8
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 4.5e-73 279.6 342 45.6
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.3e-72 278.1 331 45.0
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 2.9e-72 276.9 338 55.3
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 3.8e-72 276.6 409 40.8
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.8e-72 276.6 342 49.4
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 5.0e-72 276.2 470 43.4
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 5.0e-72 276.2 380 42.6
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 6.5e-72 275.8 339 44.0
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.1e-71 275.0 468 44.0
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 1.1e-71 275.0 428 39.7
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.4e-71 274.6 316 47.5
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 4.2e-71 273.1 463 45.4
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 1.2e-70 271.6 315 43.8
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 1.6e-70 271.2 315 43.8
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.6e-70 271.2 334 42.5
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 1.6e-70 271.2 334 42.5
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 2.7e-70 270.4 344 43.6
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 4.7e-70 269.6 329 48.3
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 6.1e-70 269.2 334 42.5
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 6.1e-70 269.2 325 44.6
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 1.4e-69 268.1 337 43.0
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 5.2e-69 266.2 471 43.3
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 8.8e-69 265.4 334 41.9
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 4.4e-68 263.1 343 44.9
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 3.7e-67 260.0 195 65.1
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.2e-65 255.0 285 46.3
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 4.5e-65 253.1 196 60.2
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 7.7e-65 252.3 289 44.6
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 2.2e-64 250.8 313 45.4
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 3.8e-64 250.0 292 42.5
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 8.5e-64 248.8 322 41.3
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.1e-63 248.4 322 41.3
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 9.4e-63 245.4 351 39.9
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.8e-61 241.1 269 53.2
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.2e-59 234.2 269 62.1
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.8e-58 231.1 166 95.8
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 4.1e-58 229.9 413 37.5
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 1.3e-56 224.9 272 46.7
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.4e-50 203.0 197 48.2
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.8e-46 190.7 190 47.4
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.6e-46 190.3 190 47.4
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 4.7e-46 189.9 190 46.8
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.8e-45 188.0 191 47.6
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.3e-45 187.6 195 45.1
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 3.0e-45 187.2 293 33.8
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.6e-41 174.9 292 35.6
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 3.5e-41 173.7 269 32.7
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 8.6e-40 169.1 307 32.2
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.0e-37 162.2 164 48.8
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 4.0e-37 160.2 312 34.0
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 5.2e-37 159.8 133 60.9
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.2e-36 158.7 312 34.0
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.5e-36 158.3 266 31.6
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.4e-36 157.1 287 32.1
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 4.9e-35 153.3 189 38.6
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.6e-33 148.3 270 30.4
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.0e-32 145.6 119 61.3
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.7e-32 144.8 146 49.3
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.0e-32 143.3 152 46.1
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 6.6e-32 142.9 195 41.5
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 2.1e-30 137.9 284 29.2
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.4e-26 125.2 107 59.8
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.3e-24 117.9 167 37.7
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 4.0e-21 107.1 133 42.1
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.1e-13 82.4 69 55.1
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 8.9e-13 79.3 101 44.6
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 1.0e-08 65.9 221 29.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 5.6e-07 60.1 55 49.1
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 1.6e-06 58.5 51 47.1


User provided reference genes

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