Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000652g0160 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1592.4 829 100.0
Nitab4.5_0004912g0100 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1508.8 817 94.6
Sopen10g034520 Solanum pennellii HOM05D001476 ORTHO05D006149 0.0e+00 1429.5 820 89.0
PGSC0003DMG400011017 Solanum tuberosum HOM05D001476 ORTHO05D006149 0.0e+00 1406.7 820 88.5
Peaxi162Scf00009g02022 Petunia axillaris HOM05D001476 ORTHO05D006149 0.0e+00 1397.9 825 89.3
Nitab4.5_0000008g0700 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1357.0 820 84.3
Nitab4.5_0011723g0020 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1354.3 820 83.8
Peaxi162Scf00141g00813 Petunia axillaris HOM05D001476 ORTHO05D006149 0.0e+00 1348.6 820 83.7
CAN.G355.19 Capsicum annuum HOM05D001476 ORTHO05D006149 0.0e+00 1303.1 834 81.1
Solyc09g013130.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 0.0e+00 1290.8 850 78.6
Sopen09g006990 Solanum pennellii HOM05D001476 ORTHO05D006149 0.0e+00 1289.2 850 78.8
Dinv35515 Davidia involucrata HOM05D001476 ORTHO05D006149 0.0e+00 1242.6 827 78.5
Solyc10g085060.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 0.0e+00 1226.1 711 86.8
Actinidia13780 Actinidia chinensis HOM05D001476 ORTHO05D006149 0.0e+00 1223.0 830 76.6
CSS0024803 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D006149 0.0e+00 1219.9 825 76.6
PGSC0003DMG400020350 Solanum tuberosum HOM05D001476 ORTHO05D006149 0.0e+00 1217.2 957 69.4
Cc06_g01690 Coffea canephora HOM05D001476 ORTHO05D006149 0.0e+00 1213.7 830 74.9
PGR031G2805 Punica granatum HOM05D001476 ORTHO05D006149 0.0e+00 1208.4 825 74.9
Hma1.2p1_0763F.1_g214610 Hydrangea macrophylla HOM05D001476 ORTHO05D006149 0.0e+00 1207.2 826 76.4
Migut.J00228 Erythranthe guttata HOM05D001476 ORTHO05D006149 0.0e+00 1206.8 832 75.5
SGA_v2.0_scaffold22G09908 Striga asiatica HOM05D001476 ORTHO05D006149 0.0e+00 1200.3 824 75.7
GSVIVG01034014001 Vitis vinifera HOM05D001476 ORTHO05D006149 0.0e+00 1195.6 827 75.1
TAR402G0001 Trochodendron aralioides HOM05D001476 ORTHO05D006149 0.0e+00 1192.2 826 75.4
SalBow5G4659 Salvia bowleyana HOM05D001476 ORTHO05D006149 0.0e+00 1191.0 883 72.6
SGA_v2.0_scaffold85G26765 Striga asiatica HOM05D001476 ORTHO05D006149 0.0e+00 1184.5 825 75.2
Thecc.05G022500 Theobroma cacao HOM05D001476 ORTHO05D006149 0.0e+00 1174.1 822 73.8
Manes.09G101900 Manihot esculenta HOM05D001476 ORTHO05D006149 0.0e+00 1172.1 834 74.0
Cpa.g.sc56.111 Carica papaya HOM05D001476 ORTHO05D006149 0.0e+00 1171.4 832 73.2
TWI74G1595 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 0.0e+00 1169.1 847 71.8
ECA236G3430 Erigeron canadensis HOM05D001476 ORTHO05D006149 0.0e+00 1167.5 820 73.9
Gohir.A09G163100 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1167.5 827 73.3
Gohir.D09G158600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1167.5 827 73.3
Eucgr.B02781 Eucalyptus grandis HOM05D001476 ORTHO05D006149 0.0e+00 1167.1 832 73.7
Gorai.006G180300 Gossypium raimondii HOM05D001476 ORTHO05D006149 0.0e+00 1166.0 841 72.4
Oeu004614.2 Olea europaea HOM05D001476 ORTHO05D006149 0.0e+00 1166.0 862 73.7
Potri.016G110800 Populus trichocarpa HOM05D001476 ORTHO05D006149 0.0e+00 1164.4 831 73.5
MELO3C003223.2 Cucumis melo HOM05D001476 ORTHO05D006149 0.0e+00 1163.3 837 72.5
CsaV3_4G025980 Cucumis sativus L. HOM05D001476 ORTHO05D006149 0.0e+00 1161.7 830 72.8
Potri.006G096100 Populus trichocarpa HOM05D001476 ORTHO05D006149 0.0e+00 1161.7 847 72.0
Ciclev10011050m.g Citrus clementina HOM05D001476 ORTHO05D006149 0.0e+00 1160.2 827 73.3
Rhsim05G0205700 Rhododendron simsii HOM05D001476 ORTHO05D006149 0.0e+00 1159.8 825 73.8
ClCG04G007260 Citrullus lanatus HOM05D001476 ORTHO05D006149 0.0e+00 1157.1 827 72.8
Duzib128G0639 Durio zibethinus HOM05D001476 ORTHO05D006149 0.0e+00 1156.4 821 73.8
Thhalv10020022m.g Eutrema salsugineum HOM05D001476 ORTHO05D006149 0.0e+00 1155.6 854 71.1
Nn2g13602 Nelumbo nucifera HOM05D001476 ORTHO05D006149 0.0e+00 1155.2 824 72.9
Sed0003764 Sechium edule HOM05D001476 ORTHO05D006149 0.0e+00 1154.8 837 71.8
TWI77G0827 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 0.0e+00 1153.3 845 72.5
Lj3g0014893 Lotus japonicus HOM05D001476 ORTHO05D006149 0.0e+00 1152.9 823 72.4
Sp3g07550 Schrenkiella parvula HOM05D001476 ORTHO05D006149 0.0e+00 1151.3 846 71.2
Ca_23816_v3 Cicer arietinum L. HOM05D001476 ORTHO05D006149 0.0e+00 1151.0 823 71.6
Prupe.6G270500 Prunus persica HOM05D001476 ORTHO05D006149 0.0e+00 1150.6 830 72.2
DCAR_024038 Daucus carota HOM05D001476 ORTHO05D006149 0.0e+00 1147.9 831 72.9
Aqoxy1G00720 Aquilegia oxysepala HOM05D001476 ORTHO05D006149 0.0e+00 1147.1 825 72.4
BcaC09g48009 Brassica carinata HOM05D001476 ORTHO05D006149 0.0e+00 1145.6 853 70.3
Haze_20947 Corylus avellana HOM05D001476 ORTHO05D006149 0.0e+00 1144.4 870 70.3
PSO210G1670 Papaver somniferum HOM05D001476 ORTHO05D006149 0.0e+00 1144.4 827 71.9
AT3G09090 Arabidopsis thaliana HOM05D001476 ORTHO05D006149 0.0e+00 1144.0 858 70.3
Carub.0003s0826 Capsella rubella HOM05D001476 ORTHO05D006149 0.0e+00 1142.5 858 69.3
Gorai.012G111700 Gossypium raimondii HOM05D001476 ORTHO05D006149 0.0e+00 1140.2 822 72.0
Sc24g0002110 Simmondsia chinensis HOM05D001476 ORTHO05D006149 0.0e+00 1139.8 858 69.8
FvH4_6g12060 Fragaria vesca HOM05D001476 ORTHO05D006149 0.0e+00 1137.9 840 70.7
BolC1t05473H Brassica oleracea HOM05D001476 ORTHO05D006149 0.0e+00 1137.1 863 68.7
AL3G20170 Arabidopsis lyrata HOM05D001476 ORTHO05D006149 0.0e+00 1136.7 864 69.2
Gohir.D04G128600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1136.3 822 72.0
HanXRQChr16g0507821 Helianthus annuus HOM05D001476 ORTHO05D006149 0.0e+00 1135.6 848 70.2
CARHR083470 Cardamine hirsuta HOM05D001476 ORTHO05D006149 0.0e+00 1135.2 855 69.2
Glyma.01G111300 Glycine max HOM05D001476 ORTHO05D006149 0.0e+00 1134.0 837 71.3
Glyma.03G076900 Glycine max HOM05D001476 ORTHO05D006149 0.0e+00 1134.0 837 71.3
Medtr4g014960 Medicago truncatula HOM05D001476 ORTHO05D006149 0.0e+00 1133.6 825 72.0
PSO832G0213 Papaver somniferum HOM05D001476 ORTHO05D006149 0.0e+00 1133.2 834 71.1
THA.LOC104816221 Tarenaya hassleriana HOM05D001476 ORTHO05D006149 0.0e+00 1132.1 881 67.8
Atru.chr8.2151 Acer truncatum HOM05D001476 ORTHO05D006149 0.0e+00 1129.8 868 69.5
BcaC09g48054 Brassica carinata HOM05D001476 ORTHO05D006149 0.0e+00 1129.8 858 69.0
CANSAT35G0098 Cannabis sativa HOM05D001476 ORTHO05D006149 0.0e+00 1129.0 823 71.1
VMungo0331G0441 Vigna mungo HOM05D001476 ORTHO05D006149 0.0e+00 1121.7 854 69.4
Sed0007041 Sechium edule HOM05D001476 ORTHO05D006149 0.0e+00 1120.9 881 67.1
A05p39780 Brassica napus HOM05D001476 ORTHO05D006149 0.0e+00 1117.4 861 68.5
Psat0s2261g0240 Pisum sativum HOM05D001476 ORTHO05D006149 0.0e+00 1117.1 842 69.1
CiPaw.09G205700 Carya illinoinensis HOM05D001476 ORTHO05D006149 0.0e+00 1116.3 832 71.6
C05p58820 Brassica napus HOM05D001476 ORTHO05D006149 0.0e+00 1114.4 861 68.3
Aa31LG3G1620 Aethionema arabicum HOM05D001476 ORTHO05D006149 0.0e+00 1112.1 867 68.1
Lsat_1_v5_gn_8_99901 Lactuca sativa HOM05D001476 ORTHO05D006149 0.0e+00 1111.3 831 70.2
TPR.G5272 Trifolium pratense HOM05D001476 ORTHO05D006149 0.0e+00 1110.5 823 71.0
BraA05t22762Z Brassica rapa HOM05D001476 ORTHO05D006149 0.0e+00 1107.0 877 67.3
Phvul.010G008300 Phaseolus vulgaris HOM05D001476 ORTHO05D006149 0.0e+00 1106.3 877 66.9
BraA01t04314Z Brassica rapa HOM05D001476 ORTHO05D006149 0.0e+00 1104.7 861 68.1
EL10Ac5g11563 Beta vulgaris HOM05D001476 ORTHO05D006149 0.0e+00 1101.3 885 66.9
FAN05G2912 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1098.2 835 70.7
Rhsim05G0205800 Rhododendron simsii HOM05D001476 ORTHO05D006149 0.0e+00 1094.7 874 66.4
Lj3A957T35 Lonicera japonica HOM05D001476 ORTHO05D006149 0.0e+00 1092.4 923 65.4
FAN02G1993 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1091.6 835 70.3
Cfa017258 Carpinus fangiana HOM05D001476 ORTHO05D002681 0.0e+00 1091.3 835 70.7
FAN14G1008 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1088.6 855 68.1
ATR0618G171 Amborella trichopoda HOM05D001476 ORTHO05D006149 0.0e+00 1087.8 837 68.1
FAN14G2619 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1087.4 855 68.0
BcaC05g29640 Brassica carinata HOM05D001476 ORTHO05D006149 0.0e+00 1085.9 896 65.0
HPP92_018041 Vanilla planifolia HOM05D001476 ORTHO05D006149 0.0e+00 1083.6 825 67.8
MD04G1146700 Malus domestica HOM05D001476 ORTHO05D006149 0.0e+00 1082.0 829 70.3
FAN09G2729 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1081.6 855 67.7
MD12G1159900 Malus domestica HOM05D001476 ORTHO05D006149 0.0e+00 1076.6 852 69.1
CDE04G3748 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 1.1e-311 1073.2 820 68.3
Lalb_Chr07g0193321 Lupinus albus HOM05D001476 ORTHO05D006149 6.8e-311 1070.5 897 65.0
Zm00001eb063130 Zea mays HOM05D001476 ORTHO05D006149 2.4e-308 1062.0 823 66.6
vmacro20235 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 3.1e-308 1061.6 825 67.9
CAN.G1297.2 Capsicum annuum HOM05D001476 ORTHO05D006149 2.0e-307 1058.9 594 89.4
unitig_699.g19385 Utricularia gibba HOM05D001476 ORTHO05D006149 2.6e-307 1058.5 819 69.0
arahy.Tifrunner.gnm1.ann1.5UT5JQ Arachis hypogaea HOM05D001476 ORTHO05D006149 1.1e-302 1043.1 869 65.4
arahy.Tifrunner.gnm1.ann1.VBIR99 Arachis hypogaea HOM05D001476 ORTHO05D006149 2.1e-301 1038.9 868 65.2
Gohir.A04G088225 Gossypium hirsutum HOM05D001476 ORTHO05D006149 8.4e-298 1026.9 760 69.6
Duzib106G0695 Durio zibethinus HOM05D001476 ORTHO05D006149 3.5e-296 1021.5 821 66.1
Os03g0825700 Oryza sativa ssp. japonica HOM05D001476 ORTHO05D006149 2.3e-295 1018.8 826 65.4
Oeu044363.1 Olea europaea HOM05D001476 ORTHO05D006149 4.8e-293 1011.1 827 66.9
CDE03G0023 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 3.1e-292 1008.4 787 65.1
Lsat_1_v5_gn_0_44361 Lactuca sativa HOM05D001476 ORTHO05D006149 2.5e-270 935.6 717 67.4
MSTRG.5600 Avicennia marina HOM05D001476 ORTHO05D006149 2.6e-267 925.6 653 74.0
Ah.11g045320 Amaranthus hybridus HOM05D001476 ORTHO05D006149 8.8e-263 910.6 852 59.4
TAR636G2437 Trochodendron aralioides HOM05D001476 ORTHO05D006149 2.4e-252 875.9 504 83.3
Pp3c20_710 Physcomitrium patens HOM05D001476 ORTHO05D006149 4.1e-252 875.2 824 55.8
RcHm_v2.0_Chr3g0463911 Rosa chinensis HOM05D001476 ORTHO05D006149 3.2e-249 865.5 674 68.7
Sabra06G0073800 Salix brachista HOM05D001476 ORTHO05D002681 9.4e-249 864.0 833 61.1
Mapoly0103s0063 Marchantia polymorpha HOM05D001476 ORTHO05D006149 2.1e-248 862.8 848 55.4
Sabra16G0107400 Salix brachista HOM05D001476 ORTHO05D006149 2.2e-245 852.8 916 55.8
SMO145G0033 Selaginella moellendorffii HOM05D001476 ORTHO05D006149 6.5e-234 814.7 828 54.5
SEGI_02222 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 2.1e-232 809.7 676 63.2
AagrBONN_evm.TU.Sc2ySwM_369.563 Anthoceros agrestis HOM05D001476 ORTHO05D006149 1.6e-179 634.0 625 57.8
TPR.G6686 Trifolium pratense HOM05D001476 ORTHO05D006149 2.5e-177 626.7 371 80.1
AUR62043525 Chenopodium quinoa HOM05D001476 ORTHO05D006149 5.3e-175 619.0 384 77.6
COL.COLO4_14599 Corchorus olitorius HOM05D001476 ORTHO05D006149 8.1e-168 595.1 352 82.7
AUR62044509 Chenopodium quinoa HOM05D001476 ORTHO05D006149 2.4e-167 593.6 341 81.5
AUR62043103 Chenopodium quinoa HOM05D001476 ORTHO05D006149 4.2e-164 582.8 361 77.6
SHI12782 Sapria himalayana HOM05D001476 ORTHO05D006149 3.0e-162 576.6 525 61.7
vmacro17486 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 7.7e-150 535.4 465 63.4
CBR_g8542 Chara braunii HOM05D001476 ORTHO05D006149 5.2e-138 496.1 677 44.9
MCO10G178 Micromonas commoda HOM05D001476 ORTHO05D006149 3.7e-136 490.0 827 37.6
AUR62043102 Chenopodium quinoa HOM05D001476 ORTHO05D006149 1.3e-133 481.5 492 58.1
Cre04.g214097 Chlamydomonas reinhardtii HOM05D001476 ORTHO05D006149 3.0e-130 470.3 953 35.5
SHI12784 Sapria himalayana HOM05D001476 ORTHO05D006149 3.0e-122 443.7 305 71.8
BcaC09g47968 Brassica carinata HOM05D001476 ORTHO05D006149 2.9e-109 400.6 297 68.0
PRCOL_00002974 Prasinoderma coloniale HOM05D001476 ORTHO05D006149 1.5e-108 398.3 991 32.0
COL.COLO4_14600 Corchorus olitorius HOM05D001476 ORTHO05D006149 3.5e-94 350.5 462 48.3
AUR62043524 Chenopodium quinoa HOM05D001476 ORTHO05D006149 1.2e-89 335.5 404 54.0
Actinidia29132 Actinidia chinensis HOM05D001476 ORTHO05D006149 2.9e-88 330.9 603 39.5
RcHm_v2.0_Chr3g0463901 Rosa chinensis HOM05D001476 ORTHO05D006149 1.0e-69 269.2 165 78.8
TAR636G0462 Trochodendron aralioides HOM05D001476 ORTHO05D006149 2.5e-68 264.6 304 59.5
Dinv37085 Davidia involucrata HOM05D001476 ORTHO05D002681 1.2e-49 202.6 327 41.3
Hund31411 Selenicereus undatus HOM05D001476 ORTHO05D006149 8.2e-43 179.9 104 81.7
BolC5t34534H Brassica oleracea HOM05D001476 ORTHO05D002681 3.6e-38 164.5 104 88.5
vmacro17485 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 5.7e-36 157.1 106 73.6
SEGI_09667 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 2.0e-33 148.7 107 65.4
MSTRG.19033 Avicennia marina HOM05D001476 ORTHO05D031643 2.0e-25 122.1 64 90.6
Rhsim09G0090000 Rhododendron simsii HOM05D001476 ORTHO05D034934 4.7e-14 84.3 79 62.0
GSVIVG01021923001 Vitis vinifera HOM05D001476 ORTHO05D006149 4.0e-13 81.3 64 57.8
TAR381G0471 Trochodendron aralioides HOM05D000141 ORTHO05D000780 2.0e-12 79.0 75 66.7
TAR629G0215 Trochodendron aralioides HOM05D000393 ORTHO05D000275 6.3e-11 73.9 55 63.6
TAR636G0366 Trochodendron aralioides HOM05D001476 ORTHO05D006149 3.1e-10 71.6 53 71.7
FAN23G1187 Fragaria x ananassa HOM05D001476 ORTHO05D031643 2.7e-09 68.6 37 83.8
TWI53G1805 Tripterygium wilfordii HOM05D001476 ORTHO05D031643 6.5e-08 63.9 52 61.5
Rhsim05G0112000 Rhododendron simsii HOM05D047264 ORTHO05D021376 1.6e-06 59.3 56 57.1


User provided reference genes

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