Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 8.0e-166 587.0 297 100.0
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.0e-136 490.3 297 86.5
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.7e-123 446.4 275 85.1
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 3.7e-123 445.3 275 84.7
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 5.4e-122 441.4 275 83.6
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 2.1e-121 439.5 275 83.3
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 3.6e-118 428.7 275 82.9
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.0e-112 410.6 275 77.1
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 2.3e-104 382.9 275 71.6
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 8.7e-104 380.9 275 72.0
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.4e-101 373.6 275 70.9
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 1.8e-101 373.2 275 70.2
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 5.8e-100 368.2 275 69.1
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 2.4e-98 362.8 283 65.7
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.4e-98 361.7 276 67.4
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 9.3e-98 360.9 274 67.5
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 9.3e-98 360.9 274 68.2
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 2.1e-97 359.8 274 66.1
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 7.8e-97 357.8 275 65.8
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.3e-96 357.1 275 66.9
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.7e-96 356.7 275 65.5
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 2.3e-96 356.3 275 65.5
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 3.0e-96 355.9 274 67.5
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 1.5e-95 353.6 274 67.2
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 2.5e-95 352.8 275 65.8
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 2.5e-95 352.8 281 67.3
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 3.3e-95 352.4 275 66.5
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 4.3e-95 352.1 272 66.2
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 5.6e-95 351.7 280 65.7
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 5.6e-95 351.7 272 67.3
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 7.3e-95 351.3 275 65.8
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 9.6e-95 350.9 277 66.4
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 2.8e-94 349.4 277 63.9
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 4.8e-94 348.6 273 65.6
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.1e-93 347.4 277 65.3
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 1.8e-93 346.7 273 65.9
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 1.8e-93 346.7 273 65.9
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 1.8e-93 346.7 274 64.6
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 2.4e-93 346.3 272 65.8
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 2.4e-93 346.3 274 63.9
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 4.0e-93 345.5 274 63.9
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 5.3e-93 345.1 275 65.1
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 6.9e-93 344.7 276 63.8
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 6.9e-93 344.7 275 65.5
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 6.9e-93 344.7 276 66.3
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 1.2e-92 344.0 276 67.0
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 1.2e-92 344.0 276 63.8
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 5.8e-92 341.7 277 66.4
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 9.9e-92 340.9 273 62.6
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 9.9e-92 340.9 276 64.5
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.7e-91 340.1 277 66.1
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 2.2e-91 339.7 280 63.6
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 2.2e-91 339.7 276 65.2
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 2.2e-91 339.7 277 64.6
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 2.2e-91 339.7 275 65.1
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 2.9e-91 339.3 272 66.2
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 2.9e-91 339.3 276 65.2
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 3.8e-91 339.0 279 63.4
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 6.4e-91 338.2 280 63.6
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 6.4e-91 338.2 276 63.0
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 8.4e-91 337.8 290 62.4
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.4e-90 337.0 299 61.2
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.6e-89 333.6 281 63.3
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 1.6e-89 333.6 279 63.4
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 3.5e-89 332.4 276 63.4
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 3.5e-89 332.4 280 62.9
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 3.5e-89 332.4 280 62.9
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 3.5e-89 332.4 276 63.4
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 4.6e-89 332.0 273 63.7
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 4.6e-89 332.0 274 62.4
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 4.6e-89 332.0 279 64.2
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 6.0e-89 331.6 286 61.2
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 7.9e-89 331.3 259 67.2
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 2.3e-88 329.7 255 65.5
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 2.3e-88 329.7 276 63.0
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 6.7e-88 328.2 292 61.3
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 8.7e-88 327.8 280 62.5
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 2.5e-87 326.2 277 63.2
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 3.3e-87 325.9 279 62.4
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 4.3e-87 325.5 281 61.6
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 4.3e-87 325.5 282 60.6
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 4.3e-87 325.5 282 61.0
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 1.3e-86 323.9 277 62.5
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.3e-86 323.9 251 64.9
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.6e-86 323.6 273 63.4
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 3.7e-86 322.4 250 66.0
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 1.1e-85 320.9 260 61.2
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 6.9e-85 318.2 326 54.3
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 1.5e-84 317.0 278 63.7
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 7.6e-84 314.7 281 62.3
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 1.4e-82 310.5 280 60.4
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 1.4e-82 310.5 275 60.7
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 1.4e-82 310.5 263 62.0
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 5.5e-82 308.5 276 59.4
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.3e-80 303.9 260 61.5
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 5.1e-80 302.0 247 65.2
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 4.8e-78 295.4 275 58.2
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 1.2e-76 290.8 256 60.2
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 2.6e-76 289.7 226 66.4
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 7.6e-76 288.1 277 57.0
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 2.2e-75 286.6 224 67.4
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 7.1e-74 281.6 275 57.8
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.1e-73 280.0 244 62.3
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 5.1e-72 275.4 276 53.3
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.9e-71 273.5 248 60.1
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 9.7e-71 271.2 222 65.3
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 1.4e-69 267.3 245 58.8
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 1.2e-68 264.2 203 67.5
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 1.6e-65 253.8 184 71.2
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 8.8e-64 248.1 229 58.1
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 7.4e-63 245.0 189 66.1
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.7e-62 243.8 257 53.3
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 2.8e-62 243.0 266 52.3
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 2.9e-59 233.0 195 59.5
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 2.1e-57 226.9 241 52.7
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 1.4e-53 214.2 264 48.1
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.3e-51 207.6 280 47.9
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.4e-50 204.1 241 50.6
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.3e-46 191.0 138 71.7
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 1.8e-45 187.2 147 66.0
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 1.6e-41 174.1 158 57.6
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 9.7e-39 164.9 140 57.9
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 4.8e-38 162.5 124 66.9
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 7.7e-36 155.2 140 55.7
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 6.8e-32 142.1 284 35.9
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.7e-30 137.5 88 75.0
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 3.6e-25 119.8 117 53.0
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 1.2e-23 114.8 76 69.7
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.2e-20 104.8 76 68.4
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 7.8e-20 102.1 66 74.2
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 2.5e-18 97.1 73 71.2
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 1.2e-17 94.7 101 49.5
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 2.1e-17 94.0 72 66.7
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.3e-16 90.5 77 59.7
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 4.9e-14 82.8 71 60.6
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 1.0e-11 75.1 43 79.1
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-10 71.2 60 63.3
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.6e-10 69.3 66 56.1
MBI07_g43742_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 9.8e-07 58.5 73 54.8
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 2.9e-06 57.0 105 41.0


User provided reference genes

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