Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000638g0280 Nicotiana tabacum HOM05D003674 ORTHO05D004226 8.0e-82 307.0 150 100.0
Nitab4.5_0000512g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.1e-43 180.3 156 63.5
CAN.G1472.4 Capsicum annuum HOM05D003674 ORTHO05D004226 6.7e-36 154.5 146 58.9
Ca_01497_v3 Cicer arietinum L. HOM05D003674 ORTHO05D004226 5.6e-35 151.4 148 58.1
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 1.8e-33 146.4 146 56.8
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 2.4e-33 146.0 146 57.5
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 2.4e-33 146.0 146 57.5
MSTRG.14342 Avicennia marina HOM05D003674 ORTHO05D004226 3.1e-33 145.6 146 56.8
Nitab4.5_0012835g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.5e-32 143.3 99 69.7
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 2.6e-32 142.5 147 57.1
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 2.6e-32 142.5 146 55.5
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 2.6e-32 142.5 146 54.1
TAR624G0173 Trochodendron aralioides HOM05D003674 ORTHO05D004226 2.6e-32 142.5 146 57.5
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 3.4e-32 142.1 146 54.8
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 5.8e-32 141.4 146 54.8
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 5.8e-32 141.4 146 54.8
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 7.6e-32 141.0 146 55.5
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 9.9e-32 140.6 146 54.8
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 9.9e-32 140.6 146 54.1
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 9.9e-32 140.6 146 54.8
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 9.9e-32 140.6 146 54.8
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 9.9e-32 140.6 146 53.4
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 1.3e-31 140.2 158 51.3
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 1.3e-31 140.2 146 54.8
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 1.3e-31 140.2 146 57.5
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 1.7e-31 139.8 146 54.1
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 1.7e-31 139.8 146 54.8
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 1.7e-31 139.8 146 53.4
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 2.2e-31 139.4 146 53.4
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.9e-31 139.0 146 54.1
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 2.9e-31 139.0 146 54.1
Peaxi162Scf00132g00117 Petunia axillaris HOM05D003674 ORTHO05D004226 2.9e-31 139.0 145 57.2
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 3.8e-31 138.7 146 54.8
Hma1.2p1_2586F.1_g324940 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 3.8e-31 138.7 146 54.8
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 3.8e-31 138.7 146 54.8
MSTRG.14332 Avicennia marina HOM05D003674 ORTHO05D004226 4.9e-31 138.3 146 53.4
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 4.9e-31 138.3 146 52.7
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 6.4e-31 137.9 146 53.4
Nn1g06549 Nelumbo nucifera HOM05D003674 ORTHO05D004226 8.4e-31 137.5 145 56.6
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 1.1e-30 137.1 146 53.4
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 1.9e-30 136.3 146 54.8
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 1.9e-30 136.3 146 50.7
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 2.4e-30 136.0 146 54.1
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 2.4e-30 136.0 141 52.5
vmacro12305 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 2.4e-30 136.0 146 52.1
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 3.2e-30 135.6 146 50.7
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 4.2e-30 135.2 141 55.3
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 5.5e-30 134.8 146 53.4
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 7.1e-30 134.4 146 50.7
SHI10399 Sapria himalayana HOM05D003674 ORTHO05D004226 1.6e-29 133.3 185 45.9
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 2.7e-29 132.5 146 52.1
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 3.5e-29 132.1 146 51.4
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 4.6e-29 131.7 146 54.1
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 6.0e-29 131.3 146 53.4
MD09G1247300 Malus domestica HOM05D003674 ORTHO05D004226 6.0e-29 131.3 146 53.4
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 7.9e-29 131.0 113 65.5
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 1.0e-28 130.6 146 54.1
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 1.0e-28 130.6 145 51.0
Hund01095 Selenicereus undatus HOM05D003674 ORTHO05D004226 1.3e-28 130.2 146 50.7
Zm00001eb360320 Zea mays HOM05D003674 ORTHO05D004226 3.0e-28 129.0 146 51.4
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 6.7e-28 127.9 146 51.4
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 6.7e-28 127.9 145 53.8
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 1.1e-27 127.1 146 51.4
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 2.5e-27 125.9 146 49.3
Os01g0678500 Oryza sativa ssp. japonica HOM05D003674 ORTHO05D004226 2.5e-27 125.9 146 50.7
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 3.3e-27 125.6 145 49.7
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 4.3e-27 125.2 141 51.1
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 9.6e-27 124.0 146 48.6
Glyma.13G296900 Glycine max HOM05D003674 ORTHO05D004226 9.6e-27 124.0 145 49.0
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 1.3e-26 123.6 146 50.7
ATR0737G184 Amborella trichopoda HOM05D003674 ORTHO05D004226 1.6e-26 123.2 137 54.0
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 2.8e-26 122.5 146 50.7
CiPaw.04G126200 Carya illinoinensis HOM05D003674 ORTHO05D004226 4.8e-26 121.7 137 51.8
Glyma.12G204400 Glycine max HOM05D003674 ORTHO05D004226 4.8e-26 121.7 145 48.3
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 6.2e-26 121.3 147 47.6
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 6.2e-26 121.3 147 47.6
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 3.4e-24 115.5 146 45.9
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 3.4e-24 115.5 146 45.2
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 3.4e-24 115.5 146 45.2
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 3.4e-24 115.5 146 45.2
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 3.4e-24 115.5 146 45.2
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 3.4e-24 115.5 146 45.2
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 4.5e-24 115.2 146 45.2
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 5.8e-24 114.8 146 45.2
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 5.8e-24 114.8 146 45.2
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 5.8e-24 114.8 146 45.2
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 5.8e-24 114.8 146 45.2
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 5.8e-24 114.8 146 45.2
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 7.6e-24 114.4 146 45.2
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 7.6e-24 114.4 146 45.2
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 1.3e-23 113.6 146 47.3
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 1.7e-23 113.2 146 44.5
Cpa.g.sc848.1 Carica papaya HOM05D003674 ORTHO05D004226 1.4e-22 110.2 95 61.1
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 3.2e-22 109.0 146 47.3
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 7.1e-22 107.8 146 46.6
Lsat_1_v5_gn_4_64281 Lactuca sativa HOM05D003674 ORTHO05D004226 7.1e-22 107.8 95 58.9
Rhsim06G0142000 Rhododendron simsii HOM05D003674 ORTHO05D004226 1.6e-21 106.7 95 57.9
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 7.9e-21 104.4 146 43.8
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 1.3e-20 103.6 146 45.9
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 1.8e-20 103.2 146 45.9
MBI06_g04180_MAGBIO Magnolia biondii HOM05D003674 ORTHO05D004226 1.8e-20 103.2 88 65.9
Mapoly0002s0274 Marchantia polymorpha HOM05D003674 ORTHO05D004226 2.3e-20 102.8 146 43.2
FAN09G3196 Fragaria x ananassa HOM05D000230 ORTHO05D004226 8.7e-20 100.9 95 55.8
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 1.1e-19 100.5 117 48.7
AagrBONN_evm.TU.Sc2ySwM_344.5080 Anthoceros agrestis HOM05D003674 ORTHO05D004226 1.5e-19 100.1 146 43.2
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 3.3e-19 99.0 146 45.2
Manes.13G146400 Manihot esculenta HOM05D003674 ORTHO05D004226 5.7e-19 98.2 146 43.2
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 3.7e-18 95.5 146 44.5
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 4.8e-18 95.1 146 41.8
Gohir.D02G179566 Gossypium hirsutum HOM05D003674 ORTHO05D004226 4.8e-18 95.1 146 41.8
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 4.8e-18 95.1 146 41.8
Haze_13165 Corylus avellana HOM05D003674 ORTHO05D004226 6.3e-18 94.7 146 41.8
Cfa014617 Carpinus fangiana HOM05D003674 ORTHO05D004226 1.4e-17 93.6 146 42.5
Oeu058850.1 Olea europaea HOM05D003674 ORTHO05D004226 1.4e-17 93.6 147 43.5
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 1.4e-17 93.6 146 42.5
Pp3c1_6270 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.8e-17 93.2 144 40.3
Pp3c1_6272 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.8e-17 93.2 144 40.3
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 1.8e-17 93.2 146 42.5
Pp3c15_12230 Physcomitrium patens HOM05D003674 ORTHO05D004226 3.1e-17 92.4 141 39.7
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 6.9e-17 91.3 146 41.8
Oeu017491.1 Olea europaea HOM05D003674 ORTHO05D004226 9.0e-17 90.9 146 43.2
FAN05G0320 Fragaria x ananassa HOM05D000230 ORTHO05D000176 5.0e-15 85.1 57 71.9
SEGI_23599 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 8.5e-15 84.3 122 41.8
Ah.01g004260 Amaranthus hybridus HOM05D003674 ORTHO05D004226 1.2e-13 80.5 57 70.2
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 1.4e-12 77.0 147 38.1
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 1.8e-12 76.6 56 66.1
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 1.8e-09 66.6 89 47.2
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 5.3e-09 65.1 75 46.7
CDE08G1051 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 9.1e-09 64.3 72 51.4
Migut.H01178 Erythranthe guttata HOM05D003674 ORTHO05D004226 2.0e-08 63.2 146 35.6
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 4.5e-08 62.0 146 34.9
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 4.5e-08 62.0 146 34.9
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 7.7e-08 61.2 75 44.0
MSTRG.14337 Avicennia marina HOM05D003674 ORTHO05D004226 2.2e-07 59.7 35 77.1
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.1e-06 57.4 146 35.6


User provided reference genes

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