Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000593g0300 Nicotiana tabacum HOM05D000003 ORTHO05D000022 4.3e-46 187.6 91 100.0
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.8e-45 184.9 89 100.0
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 6.2e-45 183.7 89 98.9
Nitab4.5_0012197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 4.0e-44 181.0 89 97.8
Sopen10g008360 Solanum pennellii HOM05D000003 ORTHO05D000022 1.1e-28 129.8 81 74.1
Solyc06g082170.2 Solanum lycopersicum HOM05D000314 ORTHO05D000189 3.8e-26 121.3 81 70.4
Solyc10g018550.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 6.5e-26 120.6 89 62.9
Nitab4.5_0003867g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.5e-25 118.6 88 68.2
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 1.0e-23 113.2 87 60.9
Peaxi162Scf00015g00940 Petunia axillaris HOM05D000145 ORTHO05D000115 5.1e-23 110.9 84 64.3
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 5.1e-23 110.9 79 65.8
Nitab4.5_0007388g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.9e-22 109.0 56 92.9
Nitab4.5_0014215g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.1e-20 101.7 51 94.1
Nitab4.5_0001616g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.3e-15 85.5 63 66.7
Peaxi162Scf00380g00713 Petunia axillaris HOM05D000003 ORTHO05D000022 9.7e-14 80.1 90 47.8
Nitab4.5_0000222g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.7e-13 79.3 58 67.2
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 5.3e-12 74.3 83 38.6
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 9.1e-12 73.6 83 38.6
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 9.1e-12 73.6 83 38.6
Lj1P723T10 Lonicera japonica HOM05D016027 ORTHO05D010957 1.2e-11 73.2 73 46.6
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 1.0e-10 70.1 73 41.1
Lj4P794T17 Lonicera japonica HOM05D016027 ORTHO05D000022 1.1e-09 66.6 73 41.1
Lj2C374T9 Lonicera japonica HOM05D000155 ORTHO05D000022 1.9e-09 65.9 73 39.7
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-09 64.7 70 44.3
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-09 64.7 70 44.3
Lj8C275T19 Lonicera japonica HOM05D016027 ORTHO05D000022 7.2e-09 63.9 73 38.4
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.4e-09 63.5 74 40.5
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 1.2e-08 63.2 69 37.7
Lj8P347T0 Lonicera japonica HOM05D016027 ORTHO05D010957 1.6e-08 62.8 77 41.6
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 2.7e-08 62.0 70 42.9
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.1e-08 60.8 79 36.7
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.1e-08 60.8 76 38.2
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 6.1e-08 60.8 72 40.3
COL.COLO4_30280 Corchorus olitorius HOM05D000155 ORTHO05D000022 7.9e-08 60.5 82 41.5
Thecc.01G207400 Theobroma cacao HOM05D000003 ORTHO05D000022 7.9e-08 60.5 82 39.0
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-07 59.3 70 40.0
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-07 59.3 70 40.0
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-07 59.3 76 36.8
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.3e-07 58.9 79 36.7
CSS0045787 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.3e-07 58.9 76 36.8
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-07 58.9 76 40.8
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.0e-07 58.5 70 37.1
Lj2C976T3 Lonicera japonica HOM05D000003 ORTHO05D000022 3.0e-07 58.5 62 37.1
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 3.9e-07 58.2 70 40.0
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.9e-07 58.2 70 37.1
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.1e-07 57.8 70 34.3
Lj6P651T37 Lonicera japonica HOM05D012818 ORTHO05D000022 5.1e-07 57.8 73 37.0
Peaxi162Scf00380g00712 Petunia axillaris HOM05D000003 ORTHO05D000022 5.1e-07 57.8 39 66.7
Peaxi162Scf01038g00144 Petunia axillaris HOM05D000003 ORTHO05D000022 5.1e-07 57.8 71 42.3
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.7e-07 57.4 70 35.7
CSS0013630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.7e-07 57.4 70 41.4
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.7e-07 57.4 70 40.0
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 6.7e-07 57.4 79 34.2
CSS0046575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.8e-07 57.0 79 35.4
Lj2C63T5 Lonicera japonica HOM05D016027 ORTHO05D000022 8.8e-07 57.0 73 34.2
CSS0045195 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-06 56.6 70 40.0
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.1e-06 56.6 79 32.9
CSS0002074 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-06 56.2 74 35.1
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-06 56.2 77 32.5
Medtr1g056190 Medicago truncatula HOM05D008718 ORTHO05D010957 1.5e-06 56.2 71 35.2
CSS0032809 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.0e-06 55.8 74 35.1
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 2.0e-06 55.8 67 38.8
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.3e-06 55.1 68 35.3
COL.COLO4_02246 Corchorus olitorius HOM05D030362 ORTHO05D025138 3.3e-06 55.1 76 36.8
Nitab4.5_0006425g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.3e-06 55.1 89 40.4
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 3.3e-06 55.1 63 38.1
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.7e-06 54.3 70 34.3
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.7e-06 54.3 70 38.6
Lj1P1149T59 Lonicera japonica HOM05D012818 ORTHO05D000022 5.7e-06 54.3 57 42.1
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.4e-06 53.9 70 38.6
CSS0041994 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.4e-06 53.9 70 37.1
Sabra09G0061300 Salix brachista HOM05D000003 ORTHO05D000022 7.4e-06 53.9 83 34.9
TPR.G10331 Trifolium pratense HOM05D008718 ORTHO05D000022 7.4e-06 53.9 53 47.2
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 7.4e-06 53.9 71 33.8
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.7e-06 53.5 83 37.3
Lj4C70T10 Lonicera japonica HOM05D000003 ORTHO05D000022 9.7e-06 53.5 63 39.7
Sabra01G0106600 Salix brachista HOM05D000003 ORTHO05D000022 9.7e-06 53.5 83 34.9


User provided reference genes

Program Settings