Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000564g0290 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.5e-211 737.6 367 100.0
Nitab4.5_0000687g0070 Nicotiana tabacum HOM05D006502 ORTHO05D004350 1.8e-143 513.1 428 66.6
Nitab4.5_0007329g0060 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.9e-133 478.4 363 74.4
Nitab4.5_0001360g0140 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.5e-131 472.2 351 72.6
Nitab4.5_0000492g0040 Nicotiana tabacum HOM05D000104 ORTHO05D005604 9.0e-127 457.6 363 70.2
Nitab4.5_0001977g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.0e-126 456.4 349 71.9
Nitab4.5_0000621g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.7e-117 426.8 450 56.0
Nitab4.5_0001263g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.2e-116 422.5 368 64.9
Nitab4.5_0001615g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.9e-115 417.9 352 66.8
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.0e-114 417.5 355 64.5
Nitab4.5_0000131g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-113 413.7 348 65.8
Nitab4.5_0000197g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-112 410.2 419 58.2
Nitab4.5_0001025g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.8e-112 409.5 385 60.3
Nitab4.5_0003338g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005969 2.4e-111 406.4 448 53.8
Nitab4.5_0000571g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.9e-111 404.8 365 61.9
Nitab4.5_0002991g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.0e-110 403.3 292 74.3
Nitab4.5_0002192g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.9e-110 401.7 371 62.0
Nitab4.5_0007992g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.9e-110 401.7 365 62.2
Nitab4.5_0021418g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.2e-108 395.6 359 63.0
Nitab4.5_0000201g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-107 394.0 358 62.0
Nitab4.5_0000483g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.6e-107 392.1 313 68.4
Nitab4.5_0000378g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.4e-105 384.8 455 51.9
Nitab4.5_0004809g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.8e-104 382.1 325 67.1
Nitab4.5_0001360g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.4e-103 379.8 370 59.7
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.3e-103 378.6 343 61.2
Nitab4.5_0000628g0060 Nicotiana tabacum HOM05D001563 ORTHO05D001956 4.5e-102 375.6 311 65.3
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.9e-100 370.2 354 59.9
Nitab4.5_0007502g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.5e-100 369.8 365 58.9
Nitab4.5_0028560g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.5e-100 368.6 376 58.2
Nitab4.5_0002094g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-99 367.5 367 58.9
Nitab4.5_0000622g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.7e-98 361.7 359 59.3
Nitab4.5_0001171g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-97 360.9 473 48.0
Nitab4.5_0006695g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.7e-96 355.9 360 60.3
Nitab4.5_0000125g0140 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.1e-95 352.4 369 57.7
Nitab4.5_0026746g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-94 350.9 369 58.0
Nitab4.5_0002468g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.7e-93 347.1 358 56.1
Nitab4.5_0001338g0090 Nicotiana tabacum HOM05D005293 ORTHO05D006764 5.0e-93 345.5 366 56.0
Nitab4.5_0010223g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.1e-91 338.6 370 56.5
Nitab4.5_0005492g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.9e-91 338.2 303 63.7
Nitab4.5_0000684g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.0e-90 337.8 279 68.8
Nitab4.5_0002995g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.3e-90 336.7 369 55.8
Nitab4.5_0004344g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.9e-90 335.9 334 57.2
Nitab4.5_0004690g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.7e-89 331.3 366 57.4
Nitab4.5_0002388g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.7e-88 329.3 316 60.1
Nitab4.5_0006854g0070 Nicotiana tabacum HOM05D002659 ORTHO05D002940 1.8e-87 327.0 455 46.8
Nitab4.5_0010800g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.4e-87 326.6 385 51.9
Nitab4.5_0001781g0230 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.1e-87 325.9 384 52.3
Nitab4.5_0000314g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.3e-87 325.5 296 63.5
Nitab4.5_0003274g0040 Nicotiana tabacum HOM05D002317 ORTHO05D002420 1.6e-86 323.9 437 49.9
Nitab4.5_0013274g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.5e-86 322.8 354 54.8
Nitab4.5_0010800g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.7e-86 321.6 370 53.2
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 2.2e-85 320.1 305 61.6
Nitab4.5_0000259g0310 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.5e-85 318.5 331 55.9
Nitab4.5_0005671g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.5e-85 318.5 396 53.5
Nitab4.5_0000053g0210 Nicotiana tabacum HOM05D000323 ORTHO05D000201 4.2e-84 315.8 338 56.5
Nitab4.5_0004063g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.4e-84 314.7 349 57.9
Nitab4.5_0025728g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.3e-82 310.1 360 55.6
Nitab4.5_0000518g0060 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.6e-81 306.6 291 61.2
Nitab4.5_0003863g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.6e-81 306.6 395 51.4
Nitab4.5_0000171g0390 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.7e-81 304.7 250 65.2
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 7.0e-79 298.5 364 48.6
Nitab4.5_0005403g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.0e-78 297.0 365 50.4
Nitab4.5_0001677g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.7e-78 296.6 439 45.3
Nitab4.5_0001756g0220 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.3e-77 294.3 362 51.7
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 3.2e-76 289.7 336 51.8
Nitab4.5_0002481g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.2e-76 289.3 350 53.1
Nitab4.5_0000108g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.4e-76 288.1 194 73.2
Nitab4.5_0001526g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-75 287.0 364 49.7
Nitab4.5_0020510g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-73 280.8 349 50.7
Nitab4.5_0001705g0030 Nicotiana tabacum HOM05D000207 ORTHO05D007704 1.7e-72 277.3 347 50.7
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 2.0e-70 270.4 186 72.0
Nitab4.5_0000062g0640 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.7e-70 270.0 194 70.1
Nitab4.5_0000056g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.9e-68 263.8 212 72.6
Nitab4.5_0000100g0240 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-67 260.4 431 44.3
Nitab4.5_0002208g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-67 260.4 194 68.6
Nitab4.5_0011782g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.8e-67 260.0 389 45.2
Nitab4.5_0004743g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.1e-67 258.8 446 42.2
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 8.0e-67 258.5 358 49.7
Nitab4.5_0007154g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.4e-65 253.1 254 59.4
Nitab4.5_0000076g0260 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.1e-63 246.5 160 76.9
Nitab4.5_0000476g0170 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.0e-63 245.4 340 48.5
Nitab4.5_0000692g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.0e-58 229.6 362 44.5
Nitab4.5_0001756g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.2e-55 219.9 214 59.8
Nitab4.5_0001770g0120 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.9e-53 213.0 252 54.4
Nitab4.5_0008150g0010 Nicotiana tabacum HOM05D001348 ORTHO05D008393 2.6e-49 200.3 356 42.7
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 3.4e-49 199.9 302 44.7
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 3.4e-49 199.9 289 46.4
Nitab4.5_0002405g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.4e-49 199.9 402 40.0
Nitab4.5_0002043g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.2e-47 193.4 338 41.4
Nitab4.5_0001070g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.7e-46 190.3 296 43.9
Nitab4.5_0002649g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.3e-45 188.0 188 55.9
Nitab4.5_0008976g0060 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.3e-44 182.2 208 55.8
Nitab4.5_0000416g0020 Nicotiana tabacum HOM05D000452 ORTHO05D000647 1.2e-43 181.4 456 34.4
Nitab4.5_0003553g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-43 180.6 137 64.2
Nitab4.5_0000130g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.8e-43 180.3 177 65.5
Nitab4.5_0008976g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.7e-43 179.5 138 63.0
Nitab4.5_0014844g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.9e-41 171.8 176 54.5
Nitab4.5_0000519g0410 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.9e-40 170.2 276 43.1
Nitab4.5_0000401g0100 Nicotiana tabacum HOM05D002342 ORTHO05D002407 3.5e-38 163.3 99 75.8
Nitab4.5_0005539g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.5e-38 163.3 446 34.5
Nitab4.5_0000062g0630 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.9e-37 159.8 163 62.6
Nitab4.5_0005447g0060 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.5e-36 157.1 177 57.6
Nitab4.5_0000899g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-35 154.5 276 43.8
Nitab4.5_0007572g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.1e-35 152.1 112 67.0
Nitab4.5_0005938g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.4e-34 150.6 177 57.6
Nitab4.5_0002244g0140 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.4e-33 146.4 186 53.2
Nitab4.5_0000428g0510 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.4e-32 142.5 360 34.7
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 1.9e-31 141.0 135 47.4
Nitab4.5_0000472g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-30 138.3 266 40.6
Nitab4.5_0002208g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.6e-29 132.5 150 59.3
Nitab4.5_0001180g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.7e-29 132.1 110 60.9
Nitab4.5_0000167g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.8e-27 127.1 160 56.2
Nitab4.5_0000076g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.1e-26 123.6 174 50.6
Nitab4.5_0002840g0040 Nicotiana tabacum HOM05D000239 ORTHO05D000484 4.4e-25 119.8 176 52.3
Nitab4.5_0005860g0060 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.2e-23 113.2 160 50.0
Nitab4.5_0004347g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-22 111.3 74 71.6
Nitab4.5_0000175g0200 Nicotiana tabacum HOM05D002702 ORTHO05D003416 3.5e-22 110.2 56 87.5
Nitab4.5_0007378g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.6e-22 109.8 91 60.4
Nitab4.5_0005345g0040 Nicotiana tabacum HOM05D002920 ORTHO05D003118 3.0e-21 107.1 354 30.8
Nitab4.5_0001770g0130 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-20 105.1 53 88.7
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-20 104.8 56 83.9
Nitab4.5_0000195g0130 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.9e-20 104.4 56 85.7
Nitab4.5_0000244g0240 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.5e-20 104.0 157 48.4
Nitab4.5_0007366g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.3e-20 103.2 56 82.1
Nitab4.5_0001127g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.6e-20 102.8 56 85.7
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.3e-19 101.7 332 29.8
Nitab4.5_0002991g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-19 100.9 54 88.9
Nitab4.5_0000707g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.1e-18 97.1 163 46.6
Nitab4.5_0003553g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.9e-17 92.0 175 42.3
Nitab4.5_0007572g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.9e-16 90.5 117 50.4
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 1.4e-15 88.2 45 86.7
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 9.3e-15 85.5 214 26.2
Nitab4.5_0009676g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.0e-14 82.8 42 81.0
Nitab4.5_0000211g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.3e-13 81.6 86 61.6
Nitab4.5_0004347g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.3e-13 81.6 86 54.7
Nitab4.5_0002244g0150 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.3e-13 80.9 51 68.6
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 2.5e-12 77.4 203 26.1
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 9.6e-12 75.5 158 27.2
Nitab4.5_0000472g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.3e-11 75.1 38 84.2
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 3.7e-11 73.6 131 29.8
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 1.1e-10 72.0 183 25.7
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 2.4e-10 70.9 173 26.6
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-10 70.9 173 26.6
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-10 70.9 173 26.6
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-10 70.9 173 26.6
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 4.0e-10 70.1 183 28.4
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 2.0e-09 67.8 156 26.3
CAN.G790.9 Capsicum annuum HOM05D000185 ORTHO05D000105 2.6e-09 67.4 64 48.4
Nitab4.5_0007407g0050 Nicotiana tabacum HOM05D005254 ORTHO05D007557 3.4e-09 67.0 180 33.9
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 9.9e-09 65.5 188 28.2
Nitab4.5_0004347g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.9e-08 63.9 54 66.7
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 1.1e-07 62.0 228 25.4
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 1.9e-07 61.2 150 27.3
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.2e-07 60.5 120 27.5
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 4.2e-07 60.1 122 27.0
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 7.1e-07 59.3 130 26.9
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.3e-07 58.9 130 28.5
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.2e-06 58.5 99 30.3
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 1.6e-06 58.2 162 24.7
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.7e-06 57.4 120 26.7
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.7e-06 57.4 129 26.4
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.5e-06 57.0 121 24.8
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.5e-06 57.0 133 27.8
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 4.6e-06 56.6 127 25.2
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 7.9e-06 55.8 136 23.5
Nitab4.5_0001756g0250 Nicotiana tabacum HOM05D004412 ORTHO05D005316 7.9e-06 55.8 33 78.8


User provided reference genes

Program Settings