Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000512g0010 Nicotiana tabacum HOM05D003674 ORTHO05D004226 2.3e-75 285.4 141 100.0
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.3e-65 253.1 131 95.4
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 9.0e-59 230.3 132 87.1
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 1.5e-58 229.6 135 82.2
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 1.0e-54 216.9 134 79.9
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 1.4e-43 179.9 138 65.9
TAR624G0523 Trochodendron aralioides HOM05D003674 ORTHO05D004226 2.4e-43 179.1 135 62.2
Cfa014617 Carpinus fangiana HOM05D003674 ORTHO05D004226 6.9e-43 177.6 131 64.9
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 9.0e-43 177.2 136 64.7
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 9.0e-43 177.2 136 65.4
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 1.2e-42 176.8 136 63.2
PGR142G3148 Punica granatum HOM05D003674 ORTHO05D004226 7.6e-42 174.1 132 67.4
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 1.0e-41 173.7 137 60.6
Hma1.2p1_1937F.1_g308270 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 1.3e-41 173.3 131 63.4
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 2.9e-41 172.2 136 61.8
Cpa.g.sc848.1 Carica papaya HOM05D003674 ORTHO05D004226 2.9e-41 172.2 131 62.6
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 3.8e-41 171.8 131 63.4
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 3.8e-41 171.8 130 63.8
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 3.8e-41 171.8 134 62.7
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 3.8e-41 171.8 133 62.4
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 3.8e-41 171.8 95 82.1
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 4.9e-41 171.4 132 60.6
Peaxi162Scf00132g00118 Petunia axillaris HOM05D003674 ORTHO05D004226 4.9e-41 171.4 127 66.9
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 6.5e-41 171.0 134 61.2
CiPaw.04G126100 Carya illinoinensis HOM05D003674 ORTHO05D004226 8.4e-41 170.6 131 62.6
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 8.4e-41 170.6 134 59.7
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 8.4e-41 170.6 131 64.9
SHI10407 Sapria himalayana HOM05D003674 ORTHO05D004226 2.5e-40 169.1 132 61.4
Rhsim06G0142000 Rhododendron simsii HOM05D003674 ORTHO05D004226 4.2e-40 168.3 136 58.8
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 7.1e-40 167.5 132 62.1
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 1.6e-39 166.4 130 66.2
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 1.6e-39 166.4 137 59.9
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 2.1e-39 166.0 131 59.5
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 2.1e-39 166.0 131 61.8
Hund01095 Selenicereus undatus HOM05D003674 ORTHO05D004226 2.1e-39 166.0 135 62.2
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 2.7e-39 165.6 132 58.3
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 2.7e-39 165.6 131 59.5
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 3.5e-39 165.2 131 61.8
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 4.6e-39 164.9 131 60.3
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 4.6e-39 164.9 117 65.8
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 6.0e-39 164.5 106 67.9
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 6.0e-39 164.5 136 63.2
Ah.01g004260 Amaranthus hybridus HOM05D003674 ORTHO05D004226 7.9e-39 164.1 131 60.3
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 7.9e-39 164.1 137 58.4
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 7.9e-39 164.1 131 61.8
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 1.0e-38 163.7 131 58.8
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 1.3e-38 163.3 131 60.3
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 1.3e-38 163.3 130 62.3
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 1.3e-38 163.3 131 58.8
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.3e-38 163.3 132 58.3
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 1.3e-38 163.3 136 63.2
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 2.3e-38 162.5 131 60.3
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 2.3e-38 162.5 131 59.5
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 2.3e-38 162.5 131 61.1
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 3.0e-38 162.2 130 61.5
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 3.0e-38 162.2 130 61.5
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 3.9e-38 161.8 130 60.0
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 3.9e-38 161.8 131 60.3
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 3.9e-38 161.8 132 62.1
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 5.1e-38 161.4 131 60.3
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 5.1e-38 161.4 131 60.3
CDE06G1319 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 5.1e-38 161.4 135 59.3
Hma1.2p1_1836F.1_g304700 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 6.7e-38 161.0 130 60.8
Nitab4.5_0000638g0270 Nicotiana tabacum HOM05D003674 ORTHO05D004226 6.7e-38 161.0 113 72.6
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 6.7e-38 161.0 134 59.7
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 8.7e-38 160.6 135 59.3
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 8.7e-38 160.6 132 62.1
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 8.7e-38 160.6 131 58.8
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 1.1e-37 160.2 131 58.8
MBI06_g04180_MAGBIO Magnolia biondii HOM05D003674 ORTHO05D004226 1.1e-37 160.2 106 66.0
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 2.5e-37 159.1 131 60.3
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 2.5e-37 159.1 131 59.5
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 2.5e-37 159.1 132 63.6
Migut.H01179 Erythranthe guttata HOM05D003674 ORTHO05D004226 2.5e-37 159.1 130 62.3
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 2.5e-37 159.1 129 58.1
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 4.3e-37 158.3 135 60.7
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 5.7e-37 157.9 131 58.8
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 5.7e-37 157.9 131 58.0
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 9.6e-37 157.1 139 59.0
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 9.6e-37 157.1 106 65.1
Glyma.13G296900 Glycine max HOM05D003674 ORTHO05D004226 9.6e-37 157.1 131 57.3
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 9.6e-37 157.1 131 59.5
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 1.3e-36 156.8 133 57.9
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 1.3e-36 156.8 129 58.1
vmacro12304 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 1.6e-36 156.4 133 55.6
MSTRG.14344 Avicennia marina HOM05D003674 ORTHO05D004226 2.1e-36 156.0 125 61.6
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 3.7e-36 155.2 131 57.3
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 3.7e-36 155.2 132 57.6
Oeu010989.1 Olea europaea HOM05D003674 ORTHO05D004226 4.8e-36 154.8 145 55.2
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 4.8e-36 154.8 122 63.1
Glyma.12G204400 Glycine max HOM05D003674 ORTHO05D004226 6.3e-36 154.5 130 56.9
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 6.3e-36 154.5 131 57.3
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 6.3e-36 154.5 134 57.5
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 8.2e-36 154.1 133 60.9
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 1.4e-35 153.3 127 57.5
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 1.8e-35 152.9 104 66.3
Gohir.D02G179632 Gossypium hirsutum HOM05D003674 ORTHO05D004226 3.1e-35 152.1 131 56.5
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 4.1e-35 151.8 131 51.9
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 5.3e-35 151.4 129 57.4
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 9.0e-35 150.6 132 59.1
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 1.2e-34 150.2 129 55.0
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 1.2e-34 150.2 129 55.0
Nn1g06551 Nelumbo nucifera HOM05D003674 ORTHO05D004226 2.0e-34 149.4 110 65.5
MSTRG.14340 Avicennia marina HOM05D003674 ORTHO05D004226 2.6e-34 149.1 108 66.7
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 2.6e-34 149.1 127 57.5
MD09G1247300 Malus domestica HOM05D003674 ORTHO05D004226 4.5e-34 148.3 133 54.9
ATR0737G001 Amborella trichopoda HOM05D003674 ORTHO05D004226 1.0e-33 147.1 131 55.0
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 2.2e-33 146.0 127 57.5
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 2.9e-33 145.6 127 56.7
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 2.9e-33 145.6 129 55.8
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 5.0e-33 144.8 133 54.9
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 5.0e-33 144.8 197 42.1
SEGI_19203 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 7.2e-32 141.0 130 54.6
Os01g0678500 Oryza sativa ssp. japonica HOM05D003674 ORTHO05D004226 2.1e-31 139.4 106 56.6
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 1.8e-30 136.3 142 51.4
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 3.0e-30 135.6 107 60.7
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 1.6e-28 129.8 130 52.3
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 2.8e-28 129.0 87 60.9
Pp3c1_6270 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.1e-27 127.1 127 51.2
Pp3c1_6272 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.1e-27 127.1 127 51.2
AagrBONN_evm.TU.Sc2ySwM_344.5080 Anthoceros agrestis HOM05D003674 ORTHO05D004226 9.1e-27 124.0 135 43.0
PGSC0003DMG400018342 Solanum tuberosum HOM05D003674 ORTHO05D004226 1.5e-26 123.2 61 85.2
Mapoly0002s0274 Marchantia polymorpha HOM05D003674 ORTHO05D004226 2.2e-25 119.4 106 54.7
Haze_13163 Corylus avellana HOM05D003674 ORTHO05D004226 1.9e-24 116.3 94 63.8
Pp3c15_12230 Physcomitrium patens HOM05D003674 ORTHO05D004226 4.2e-24 115.2 133 48.1
FAN05G0320 Fragaria x ananassa HOM05D000230 ORTHO05D000176 2.7e-23 112.5 101 61.4
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 8.8e-22 107.5 90 66.7
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 4.1e-19 98.6 71 64.8
FAN09G3196 Fragaria x ananassa HOM05D000230 ORTHO05D004226 7.7e-18 94.4 69 58.0
arahy.Tifrunner.gnm1.ann1.Y3H9JV Arachis hypogaea HOM05D003674 ORTHO05D004226 1.3e-17 93.6 77 46.8
Lsat_1_v5_gn_4_64281 Lactuca sativa HOM05D003674 ORTHO05D004226 9.4e-16 87.4 68 64.7
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 7.4e-13 77.8 131 38.2
MSTRG.14333 Avicennia marina HOM05D003674 ORTHO05D004226 3.1e-11 72.4 69 56.5
Nitab4.5_0009871g0010 Nicotiana tabacum HOM05D003674 ORTHO05D004226 3.1e-11 72.4 50 66.0
Pp3c3_16950 Physcomitrium patens HOM05D003674 ORTHO05D004226 4.7e-07 58.5 111 30.6
CBR_g54426 Chara braunii HOM05D003674 ORTHO05D004226 8.0e-07 57.8 99 30.3
Lj4g0017968 Lotus japonicus HOM05D003674 ORTHO05D004226 8.0e-07 57.8 47 53.2
Pp3c1_28370 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.0e-06 57.4 96 32.3
arahy.Tifrunner.gnm1.ann1.WCYV83 Arachis hypogaea HOM05D003674 ORTHO05D004226 2.3e-06 56.2 38 50.0
Pp3c14_20770 Physcomitrium patens HOM05D003674 ORTHO05D004226 6.7e-06 54.7 96 32.3


User provided reference genes

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