Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000493g0060 Nicotiana tabacum HOM05D004261 ORTHO05D005642 1.2e-72 276.6 161 100.0
Nitab4.5_0005188g0030 Nicotiana tabacum HOM05D004261 ORTHO05D005642 1.0e-34 150.6 68 97.1
Nitab4.5_0007899g0010 Nicotiana tabacum HOM05D004261 ORTHO05D005642 1.0e-34 150.6 68 97.1
CAN.G1424.13 Capsicum annuum HOM05D004261 ORTHO05D005642 1.3e-34 150.2 69 92.8
Peaxi162Scf00252g00117 Petunia axillaris HOM05D004261 ORTHO05D005642 1.3e-34 150.2 68 95.6
Solyc07g005510.3 Solanum lycopersicum HOM05D004261 ORTHO05D005642 3.9e-34 148.7 68 95.6
Sopen07g001610 Solanum pennellii HOM05D004261 ORTHO05D005642 3.9e-34 148.7 68 95.6
PGSC0003DMG400011135 Solanum tuberosum HOM05D004261 ORTHO05D005642 3.9e-34 148.7 68 95.6
Lalb_Chr12g0198661 Lupinus albus HOM05D004261 ORTHO05D005642 1.6e-32 143.3 68 91.2
Hma1.2p1_0222F.1_g093420 Hydrangea macrophylla HOM05D004261 ORTHO05D005642 2.8e-32 142.5 70 88.6
PSO447G0351 Papaver somniferum HOM05D004261 ORTHO05D005642 3.7e-32 142.1 68 86.8
Manes.06G036500 Manihot esculenta HOM05D004261 ORTHO05D005642 4.8e-32 141.7 68 89.7
PSO210G0537 Papaver somniferum HOM05D004261 ORTHO05D005642 4.8e-32 141.7 68 85.3
Ca_21120_v3 Cicer arietinum L. HOM05D004261 ORTHO05D005642 8.2e-32 141.0 68 91.2
COL.COLO4_18797 Corchorus olitorius HOM05D004261 ORTHO05D005642 8.2e-32 141.0 68 89.7
Gohir.A13G184300 Gossypium hirsutum HOM05D004261 ORTHO05D005642 8.2e-32 141.0 68 89.7
Gohir.D13G190400 Gossypium hirsutum HOM05D004261 ORTHO05D005642 8.2e-32 141.0 68 89.7
Gorai.013G216300 Gossypium raimondii HOM05D004261 ORTHO05D005642 8.2e-32 141.0 68 89.7
PSO384G0442 Papaver somniferum HOM05D004261 ORTHO05D005642 1.1e-31 140.6 68 86.8
TAR626G1226 Trochodendron aralioides HOM05D004261 ORTHO05D005642 1.1e-31 140.6 68 88.2
ECA234G2027 Erigeron canadensis HOM05D004261 ORTHO05D005642 1.4e-31 140.2 68 89.7
Thecc.09G031800 Theobroma cacao HOM05D004261 ORTHO05D005642 1.4e-31 140.2 68 89.7
Cpa.g.sc46.146 Carica papaya HOM05D004261 ORTHO05D005642 1.8e-31 139.8 68 89.7
HanXRQChr10g0313741 Helianthus annuus HOM05D004261 ORTHO05D005642 1.8e-31 139.8 109 63.3
Lsat_1_v5_gn_5_91701 Lactuca sativa HOM05D004261 ORTHO05D005642 1.8e-31 139.8 105 65.7
unitig_746.g26545 Utricularia gibba HOM05D004261 ORTHO05D005642 1.8e-31 139.8 68 88.2
GSVIVG01003874001 Vitis vinifera HOM05D004261 ORTHO05D005642 1.8e-31 139.8 68 88.2
MSTRG.10687 Avicennia marina HOM05D004261 ORTHO05D005642 2.4e-31 139.4 68 88.2
Dinv42863 Davidia involucrata HOM05D004261 ORTHO05D005642 2.4e-31 139.4 68 86.8
Dinv43237 Davidia involucrata HOM05D004261 ORTHO05D005642 2.4e-31 139.4 68 86.8
Psat4g009520 Pisum sativum HOM05D004261 ORTHO05D005642 2.4e-31 139.4 68 88.2
Atru.chr7.108 Acer truncatum HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 86.8
BcaB03g12669 Brassica carinata HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
BcaC01g01126 Brassica carinata HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
A01p07240 Brassica napus HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
A08p19000 Brassica napus HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
C03p88420 Brassica napus HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
BolC3t21150H Brassica oleracea HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
BraA01t00673Z Brassica rapa HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
BraA08t33861Z Brassica rapa HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
DCAR_019387 Daucus carota HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 86.8
Lj7A458T46 Lonicera japonica HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 88.2
Sp7g28820 Schrenkiella parvula HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 85.3
TWI34G0662 Tripterygium wilfordii HOM05D004261 ORTHO05D005642 3.1e-31 139.0 68 88.2
BcaC09g51881 Brassica carinata HOM05D004261 ORTHO05D005642 4.1e-31 138.7 68 83.8
C01p08000 Brassica napus HOM05D004261 ORTHO05D005642 4.1e-31 138.7 68 83.8
BolC1t00789H Brassica oleracea HOM05D004261 ORTHO05D005642 4.1e-31 138.7 68 83.8
CSS0033797 Camellia sinensis var. sinensis HOM05D004261 ORTHO05D005642 4.1e-31 138.7 68 88.2
CSS0036379 Camellia sinensis var. sinensis HOM05D004261 ORTHO05D005642 4.1e-31 138.7 68 88.2
MELO3C010229.2 Cucumis melo HOM05D004261 ORTHO05D005642 4.1e-31 138.7 68 86.8
CsaV3_1G028900 Cucumis sativus L. HOM05D004261 ORTHO05D005642 4.1e-31 138.7 68 86.8
CANSAT11G1451 Cannabis sativa HOM05D004261 ORTHO05D005642 5.3e-31 138.3 68 85.3
Cc06_g15100 Coffea canephora HOM05D004261 ORTHO05D005642 5.3e-31 138.3 68 86.8
Cfa020832 Carpinus fangiana HOM05D004261 ORTHO05D005642 6.9e-31 137.9 68 86.8
ClCG06G012350 Citrullus lanatus HOM05D004261 ORTHO05D005642 6.9e-31 137.9 68 86.8
Eucgr.C02572 Eucalyptus grandis HOM05D004261 ORTHO05D005642 6.9e-31 137.9 68 86.8
Eucgr.L01575 Eucalyptus grandis HOM05D004261 ORTHO05D005642 6.9e-31 137.9 68 86.8
Lj4g0000641 Lotus japonicus HOM05D004261 ORTHO05D005642 6.9e-31 137.9 68 86.8
Medtr4g130980 Medicago truncatula HOM05D004261 ORTHO05D005642 6.9e-31 137.9 67 89.6
SalBow1G4344 Salvia bowleyana HOM05D004261 ORTHO05D005642 6.9e-31 137.9 68 86.8
Ciclev10028238m.g Citrus clementina HOM05D004261 ORTHO05D005642 9.0e-31 137.5 68 88.2
Duzib150G0627 Durio zibethinus HOM05D004261 ORTHO05D005642 9.0e-31 137.5 68 86.8
Manes.14G112684 Manihot esculenta HOM05D004261 ORTHO05D005642 9.0e-31 137.5 68 86.8
Sed0000229 Sechium edule HOM05D004261 ORTHO05D005642 9.0e-31 137.5 68 86.8
VMungo1215G0903 Vigna mungo HOM05D004261 ORTHO05D005642 9.0e-31 137.5 68 85.3
Actinidia04293 Actinidia chinensis HOM05D004261 ORTHO05D005642 1.2e-30 137.1 70 85.7
Duzib168G0132 Durio zibethinus HOM05D004261 ORTHO05D005642 1.2e-30 137.1 68 88.2
SGA_v2.0_scaffold12G05991 Striga asiatica HOM05D004261 ORTHO05D005642 1.2e-30 137.1 68 86.8
Eucgr.L00697 Eucalyptus grandis HOM05D004261 ORTHO05D005642 1.5e-30 136.7 68 85.3
Glyma.02G203300 Glycine max HOM05D004261 ORTHO05D005642 1.5e-30 136.7 68 86.8
Nn8g39870 Nelumbo nucifera HOM05D004261 ORTHO05D005642 1.5e-30 136.7 68 83.8
Phvul.003G156600 Phaseolus vulgaris HOM05D004261 ORTHO05D005642 1.5e-30 136.7 69 84.1
PGR102G0847 Punica granatum HOM05D004261 ORTHO05D005642 1.5e-30 136.7 68 86.8
arahy.Tifrunner.gnm1.ann1.FHD422 Arachis hypogaea HOM05D004261 ORTHO05D005642 2.0e-30 136.3 68 86.8
arahy.Tifrunner.gnm1.ann1.V3YSAY Arachis hypogaea HOM05D004261 ORTHO05D005642 2.0e-30 136.3 68 86.8
Hma1.2p1_0028F.1_g017500 Hydrangea macrophylla HOM05D004261 ORTHO05D005642 2.0e-30 136.3 68 86.8
AT4G30950 Arabidopsis thaliana HOM05D004261 ORTHO05D005642 2.6e-30 136.0 68 83.8
Thhalv10025201m.g Eutrema salsugineum HOM05D004261 ORTHO05D005642 2.6e-30 136.0 68 83.8
PSO339G2423 Papaver somniferum HOM05D004261 ORTHO05D005642 2.6e-30 136.0 68 85.3
Carub.0007s0959 Capsella rubella HOM05D004261 ORTHO05D005642 3.4e-30 135.6 113 59.3
CiPaw.16G113600 Carya illinoinensis HOM05D004261 ORTHO05D005642 3.4e-30 135.6 68 83.8
Nn2g12345 Nelumbo nucifera HOM05D004261 ORTHO05D005642 3.4e-30 135.6 68 83.8
Aqoxy7G03455 Aquilegia oxysepala HOM05D004261 ORTHO05D005642 4.5e-30 135.2 68 88.2
TWI32G0296 Tripterygium wilfordii HOM05D004261 ORTHO05D005642 4.5e-30 135.2 68 83.8
Migut.K00333 Erythranthe guttata HOM05D004261 ORTHO05D005642 7.6e-30 134.4 67 85.1
AL7G21130 Arabidopsis lyrata HOM05D004261 ORTHO05D005642 1.0e-29 134.0 68 82.4
QL02p093093 Quercus lobata HOM05D004261 ORTHO05D005642 1.3e-29 133.7 68 82.4
EL10Ac8g20262 Beta vulgaris HOM05D004261 ORTHO05D005642 2.2e-29 132.9 67 85.1
Sed0011548 Sechium edule HOM05D004261 ORTHO05D005642 2.2e-29 132.9 68 83.8
CARHR238850 Cardamine hirsuta HOM05D004261 ORTHO05D005642 2.9e-29 132.5 68 82.4
Potri.006G185400 Populus trichocarpa HOM05D004261 ORTHO05D005642 2.9e-29 132.5 68 83.8
Sabra06G0140900 Salix brachista HOM05D004261 ORTHO05D005642 3.8e-29 132.1 68 83.8
HPP92_016038 Vanilla planifolia HOM05D004261 ORTHO05D005642 5.0e-29 131.7 68 80.9
Prupe.7G261900 Prunus persica HOM05D004261 ORTHO05D005642 6.5e-29 131.3 67 83.6
THA.LOC104803563 Tarenaya hassleriana HOM05D004261 ORTHO05D005642 6.5e-29 131.3 68 82.4
THA.LOC104819907 Tarenaya hassleriana HOM05D004261 ORTHO05D005642 6.5e-29 131.3 68 83.8
FvH4_1g01030 Fragaria vesca HOM05D004261 ORTHO05D005642 1.4e-28 130.2 68 80.9
FAN23G0543 Fragaria x ananassa HOM05D004261 ORTHO05D005642 1.4e-28 130.2 68 80.9
FAN28G1418 Fragaria x ananassa HOM05D004261 ORTHO05D005642 1.4e-28 130.2 68 80.9
RcHm_v2.0_Chr2g0085771 Rosa chinensis HOM05D004261 ORTHO05D005642 1.4e-28 130.2 68 80.9
MD15G1152700 Malus domestica HOM05D004261 ORTHO05D005642 1.9e-28 129.8 67 83.6
Potri.018G107700 Populus trichocarpa HOM05D004261 ORTHO05D005642 5.5e-28 128.3 68 82.4
Zm00001eb041150 Zea mays HOM05D004261 ORTHO05D005642 5.5e-28 128.3 68 80.9
Aa31LG2G19390 Aethionema arabicum HOM05D004261 ORTHO05D005642 9.3e-28 127.5 64 82.8
Sed0002610 Sechium edule HOM05D004261 ORTHO05D005642 9.3e-28 127.5 67 79.1
Lalb_Chr08g0234121 Lupinus albus HOM05D004261 ORTHO05D005642 2.1e-27 126.3 68 77.9
Medtr2g460790 Medicago truncatula HOM05D004261 ORTHO05D005642 4.6e-27 125.2 68 76.5
Mapoly0020s0161 Marchantia polymorpha HOM05D004261 ORTHO05D005642 6.1e-27 124.8 68 75.0
ATR0739G067 Amborella trichopoda HOM05D004261 ORTHO05D005642 1.0e-26 124.0 68 79.4
Hund02961 Selenicereus undatus HOM05D004261 ORTHO05D005642 1.8e-26 123.2 68 79.4
Ah.14g078290 Amaranthus hybridus HOM05D004261 ORTHO05D005642 2.3e-26 122.9 68 77.9
Os08g0440900 Oryza sativa ssp. japonica HOM05D004261 ORTHO05D005642 3.0e-26 122.5 68 79.4
Pp3c12_4540 Physcomitrium patens HOM05D004261 ORTHO05D005642 3.0e-26 122.5 68 79.4
CDE01G0289 Ceratophyllum demersum HOM05D004261 ORTHO05D005642 3.9e-26 122.1 68 75.0
AUR62020911 Chenopodium quinoa HOM05D004261 ORTHO05D005642 1.5e-25 120.2 68 75.0
Psat6g091640 Pisum sativum HOM05D004261 ORTHO05D005642 2.5e-25 119.4 68 73.5
BcaNung03426 Brassica carinata HOM05D004261 ORTHO05D005642 2.2e-21 106.3 68 69.1
Actinidia38332 Actinidia chinensis HOM05D004261 ORTHO05D005642 6.5e-21 104.8 48 89.6
Dinv41386 Davidia involucrata HOM05D004261 ORTHO05D005642 1.4e-20 103.6 52 82.7
MSTRG.26282 Avicennia marina HOM05D004261 ORTHO05D005642 1.2e-19 100.5 48 85.4
SMO172G0066 Selaginella moellendorffii HOM05D004261 ORTHO05D005642 2.6e-17 92.8 68 60.3
Cre13.g590500 Chlamydomonas reinhardtii HOM05D004261 ORTHO05D005642 3.3e-17 92.4 68 58.8
Sc08g0005140 Simmondsia chinensis HOM05D004261 ORTHO05D005642 5.7e-17 91.7 52 75.0
Sc08g0005220 Simmondsia chinensis HOM05D004261 ORTHO05D005642 5.7e-17 91.7 52 75.0
Pp3c16_17920 Physcomitrium patens HOM05D004261 ORTHO05D005642 9.7e-17 90.9 68 55.9
AagrBONN_evm.TU.Sc2ySwM_117.2113 Anthoceros agrestis HOM05D004261 ORTHO05D005642 3.7e-16 89.0 68 60.3
Pp3c15_23330 Physcomitrium patens HOM05D004261 ORTHO05D005642 8.2e-16 87.8 68 54.4
FAN26G2907 Fragaria x ananassa HOM05D004261 ORTHO05D005642 1.4e-15 87.0 68 61.8
Mapoly0050s0104 Marchantia polymorpha HOM05D004261 ORTHO05D005642 1.4e-15 87.0 69 60.9
SMO201G0117 Selaginella moellendorffii HOM05D004261 ORTHO05D005642 2.4e-15 86.3 69 58.0
SMO201G0241 Selaginella moellendorffii HOM05D004261 ORTHO05D005642 4.1e-15 85.5 69 56.5
SMO268G0057 Selaginella moellendorffii HOM05D004261 ORTHO05D005642 6.9e-15 84.7 69 56.5
arahy.Tifrunner.gnm1.ann1.UFSI1J Arachis hypogaea HOM05D000295 ORTHO05D000188 2.6e-14 82.8 70 55.7
arahy.Tifrunner.gnm1.ann1.ZRK7H3 Arachis hypogaea HOM05D004261 ORTHO05D005642 2.6e-14 82.8 46 80.4
CBR_g56619 Chara braunii HOM05D004261 ORTHO05D005642 4.5e-14 82.0 67 53.7
Lj6g0016605 Lotus japonicus HOM05D004261 ORTHO05D005642 7.7e-14 81.3 68 57.4
arahy.Tifrunner.gnm1.ann1.93DW2D Arachis hypogaea HOM05D004261 ORTHO05D021484 1.3e-13 80.5 70 54.3
CBR_g63073 Chara braunii HOM05D004261 ORTHO05D005642 5.0e-13 78.6 67 52.2


User provided reference genes

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