Gene: Sopen07g001610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g001610
  • Transcript Identifier Sopen07g001610.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 570850-576161 : positive

Gene Family Information

  • ID HOM05D004261
  • #Genes/#Species 167/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g001610.1

Descriptions

  • Description Omega-6 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Brassica napus (Rape), Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition. | fatty acid desaturase 6 (FAD6) | FUNCTIONS IN: omega-6 fatty acid desaturase activity | INVOLVED IN: photoinhibition, fatty acid biosynthetic process | LOCATED IN: chloroplast, chloroplast envelope | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 | BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
InterProlipid metabolic process
GO:0010205
ISO
PLAZA Integrative Orthologyphotoinhibition AT4G30950
GO:0006633
ISO
PLAZA Integrative Orthologyfatty acid biosynthetic process AT4G30950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT4G30950
GO:0045485
ISO
PLAZA Integrative Orthologyomega-6 fatty acid desaturase activity AT4G30950

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G30950
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G30950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005804 Fatty acid desaturase domain
Mapman id Description
5.1.7.3 Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.delta-12/delta-15 fatty acid desaturase (FAD2/3/6-8)