Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 7.9e-191 670.2 328 100.0
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.5e-160 567.8 451 68.1
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 4.7e-159 564.7 460 66.1
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 3.3e-157 558.5 461 65.1
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 7.0e-147 524.2 457 60.6
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 3.5e-146 521.9 456 61.0
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 5.0e-145 518.1 462 60.2
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.1e-143 512.7 461 59.0
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 2.7e-143 512.3 459 59.3
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 4.0e-142 508.4 453 59.4
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 4.0e-142 508.4 462 59.1
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 2.0e-141 506.1 467 57.8
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.0e-141 506.1 451 59.0
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.3e-140 503.4 451 59.2
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 2.8e-140 502.3 462 57.6
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.7e-140 501.9 412 62.4
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 6.3e-140 501.1 462 58.0
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 8.3e-140 500.7 461 57.5
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 8.3e-140 500.7 448 58.5
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.1e-139 500.4 410 62.4
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 2.4e-139 499.2 462 57.6
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 4.1e-139 498.4 456 58.8
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 9.2e-139 497.3 435 59.8
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 2.0e-138 496.1 461 57.7
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 2.0e-138 496.1 452 57.7
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 4.5e-138 495.0 430 60.0
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 5.9e-138 494.6 455 57.6
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 7.7e-138 494.2 455 57.1
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.0e-137 493.8 480 55.6
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.3e-137 493.4 458 57.6
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.3e-137 493.4 449 59.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.3e-137 493.4 444 58.8
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.7e-137 493.0 459 57.5
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.7e-137 493.0 435 58.2
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 2.3e-137 492.7 462 56.5
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 2.3e-137 492.7 436 58.9
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 2.9e-137 492.3 484 55.0
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 3.8e-137 491.9 472 55.7
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 5.0e-137 491.5 446 57.8
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 6.6e-137 491.1 449 57.9
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.6e-137 490.7 423 60.5
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.5e-136 490.0 453 56.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.5e-136 490.0 438 57.8
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.5e-136 490.0 432 58.1
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.5e-136 489.2 447 56.4
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.5e-136 489.2 429 59.7
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 3.3e-136 488.8 429 59.2
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 4.3e-136 488.4 431 58.9
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 5.6e-136 488.0 450 56.9
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 5.6e-136 488.0 463 56.2
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.6e-135 486.5 435 57.9
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.6e-135 486.5 462 56.1
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.8e-135 485.7 462 56.3
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 2.8e-135 485.7 447 56.8
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 3.6e-135 485.3 452 56.4
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 3.6e-135 485.3 433 58.4
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 4.7e-135 485.0 452 55.8
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 6.1e-135 484.6 463 55.7
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.8e-134 483.0 462 56.1
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 3.0e-134 482.3 460 56.3
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 4.0e-134 481.9 464 56.0
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 5.2e-134 481.5 465 55.1
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 5.2e-134 481.5 448 56.2
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 6.8e-134 481.1 464 55.2
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 6.8e-134 481.1 444 56.1
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 8.9e-134 480.7 462 55.4
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 8.9e-134 480.7 434 57.4
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 2.0e-133 479.6 430 58.8
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 2.6e-133 479.2 401 65.3
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.6e-133 479.2 434 57.1
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 3.4e-133 478.8 466 54.5
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.4e-133 478.4 443 58.0
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.3e-132 476.9 432 57.4
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 3.7e-132 475.3 438 56.8
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 8.3e-132 474.2 437 56.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 2.4e-131 472.6 416 59.9
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.6e-130 469.9 433 56.4
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 2.0e-130 469.5 442 56.6
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 5.0e-129 464.9 490 52.4
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.1e-128 463.8 430 55.8
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 5.6e-128 461.5 415 56.9
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.2e-125 453.8 429 57.1
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 4.4e-125 451.8 454 52.0
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 2.2e-124 449.5 426 54.9
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 4.9e-124 448.4 436 53.7
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.3e-121 440.3 382 63.9
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.3e-121 439.5 563 46.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 5.6e-120 434.9 426 54.0
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.8e-119 432.6 382 60.5
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 5.2e-118 428.3 436 52.1
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 8.9e-118 427.6 401 56.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.4e-117 425.6 475 50.5
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 8.3e-116 421.0 424 51.7
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.4e-107 393.7 434 51.4
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.0e-105 387.5 401 53.1
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 4.3e-104 382.1 389 54.5
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.2e-101 374.0 421 48.2
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 3.2e-99 365.9 387 51.7
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.5e-96 356.3 357 54.9
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.6e-95 353.6 344 55.5
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 6.9e-94 348.2 421 45.8
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.6e-93 346.3 488 45.5
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.6e-87 327.0 448 41.3
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.1e-80 304.3 168 83.3
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 2.5e-80 303.1 188 76.6
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 5.6e-80 302.0 184 79.3
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 7.1e-75 285.0 159 84.3
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 6.9e-62 241.9 374 38.5
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 4.6e-58 229.2 147 78.2
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 3.5e-45 186.4 147 60.5
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.9e-44 183.3 171 56.7
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 6.1e-42 175.6 101 77.2
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 6.5e-28 129.0 81 71.6
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.1e-11 75.1 43 81.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.5e-11 73.9 42 81.0
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.3e-11 73.2 42 78.6
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 7.3e-11 72.4 128 39.1
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 5.2e-09 66.2 43 74.4


User provided reference genes

Program Settings