Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 7.3e-87 323.9 172 100.0
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 5.8e-84 314.3 172 94.8
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 3.5e-81 305.1 172 91.3
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.0e-80 303.5 172 90.7
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 3.3e-79 298.5 173 90.2
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 4.3e-79 298.1 172 89.5
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 3.1e-69 265.4 173 80.9
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 9.9e-68 260.4 173 78.6
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 4.9e-67 258.1 178 79.2
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 3.5e-65 251.9 173 76.3
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 4.6e-65 251.5 173 76.9
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 7.8e-65 250.8 173 75.7
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 3.0e-64 248.8 175 75.4
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 3.0e-64 248.8 173 76.3
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 3.9e-64 248.4 174 76.4
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 5.1e-64 248.1 173 75.7
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 8.6e-64 247.3 173 75.1
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.5e-63 246.5 172 74.4
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 2.5e-63 245.7 174 74.1
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 2.5e-63 245.7 173 75.7
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 4.3e-63 245.0 173 73.4
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 4.3e-63 245.0 173 73.4
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 4.3e-63 245.0 173 73.4
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 5.6e-63 244.6 173 74.0
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 7.3e-63 244.2 173 74.0
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 9.6e-63 243.8 172 73.3
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.2e-62 243.4 176 75.6
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 1.6e-62 243.0 173 72.8
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 1.6e-62 243.0 175 74.9
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 2.1e-62 242.7 174 75.3
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 2.1e-62 242.7 173 73.4
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 1.4e-61 240.0 172 73.3
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.8e-61 239.6 176 74.4
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 2.4e-61 239.2 172 72.7
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 2.4e-61 239.2 173 72.8
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 3.1e-61 238.8 174 74.1
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 3.1e-61 238.8 174 74.1
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 3.1e-61 238.8 173 72.8
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 4.0e-61 238.4 173 71.7
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 5.2e-61 238.0 173 74.0
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 6.9e-61 237.7 174 74.1
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 9.0e-61 237.3 173 71.7
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.2e-60 236.9 173 72.3
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.0e-60 236.1 173 72.3
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.0e-60 236.1 173 72.3
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 4.4e-60 235.0 176 76.1
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 4.4e-60 235.0 174 72.4
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 4.4e-60 235.0 168 75.0
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 5.8e-60 234.6 173 71.7
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 1.3e-59 233.4 174 73.6
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 1.3e-59 233.4 173 69.4
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 1.3e-59 233.4 174 73.6
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.7e-59 233.0 175 73.1
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 1.7e-59 233.0 175 74.3
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 3.8e-59 231.9 174 70.1
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 4.9e-59 231.5 174 71.8
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 8.4e-59 230.7 164 75.0
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.4e-58 229.9 167 73.7
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 4.2e-58 228.4 184 67.9
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 4.2e-58 228.4 174 70.1
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 2.1e-57 226.1 172 68.6
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 2.7e-57 225.7 174 70.1
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 2.7e-57 225.7 172 73.8
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 3.5e-57 225.3 177 72.3
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 6.0e-57 224.6 174 71.3
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.0e-56 223.8 174 69.5
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-56 223.4 174 69.5
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-56 223.4 174 69.5
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-56 223.4 174 69.5
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.3e-56 223.4 174 69.5
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 1.3e-56 223.4 174 68.4
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 2.3e-56 222.6 174 69.0
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 3.0e-56 222.2 174 69.0
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 3.9e-56 221.9 175 66.9
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 3.9e-56 221.9 174 69.0
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 3.9e-56 221.9 174 69.0
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 3.9e-56 221.9 173 68.2
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 5.1e-56 221.5 174 69.0
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 1.5e-55 219.9 174 67.8
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 2.5e-55 219.2 152 75.7
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 7.3e-55 217.6 175 68.0
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 2.1e-54 216.1 174 67.8
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 2.8e-54 215.7 175 68.6
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 2.8e-54 215.7 173 68.8
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 4.0e-53 211.8 174 70.1
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 2.6e-52 209.1 168 68.5
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 8.4e-51 204.1 152 76.3
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 1.2e-49 200.3 152 72.4
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 2.1e-49 199.5 138 73.2
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 2.1e-49 199.5 173 64.2
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 2.7e-49 199.1 172 64.5
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 2.5e-47 192.6 140 70.7
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 1.3e-46 190.3 151 70.9
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 1.1e-45 187.2 178 58.4
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 1.8e-45 186.4 175 56.6
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.3e-43 180.3 172 58.1
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 1.6e-41 173.3 183 55.7
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 6.0e-41 171.4 164 61.0
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 1.0e-40 170.6 153 63.4
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 8.7e-40 167.5 137 71.5
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 2.1e-38 162.9 149 63.8
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 5.3e-37 158.3 116 73.3
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 9.3e-34 147.5 161 55.9
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.0e-32 144.1 137 62.8
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 5.1e-32 141.7 137 61.3
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 3.4e-28 129.0 114 67.5
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 4.6e-25 118.6 163 42.9
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 6.1e-25 118.2 106 67.0
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 6.7e-24 114.8 108 65.7
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.7e-22 110.2 112 63.4
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 1.7e-22 110.2 164 45.1
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 3.1e-21 105.9 104 61.5
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.7e-17 92.8 106 59.4
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 5.1e-16 88.6 69 73.9
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 6.3e-14 81.6 70 55.7
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 1.3e-11 73.9 121 47.1
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 1.1e-10 70.9 107 50.5
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 4.2e-10 68.9 95 50.5
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 5.5e-10 68.6 75 58.7
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 3.6e-09 65.9 61 62.3
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 3.6e-09 65.9 61 62.3
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 4.7e-09 65.5 88 53.4
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 8.0e-09 64.7 83 50.6
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.0e-08 64.3 61 60.7
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 3.9e-08 62.4 61 57.4
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 8.8e-08 61.2 62 61.3
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 2.0e-07 60.1 61 60.7
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 2.6e-07 59.7 61 55.7
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-06 57.4 43 72.1
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 4.8e-06 55.5 43 69.8
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 6.3e-06 55.1 139 34.5


User provided reference genes

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