Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000433g0210 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.6e-91 339.3 169 100.0
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 7.7e-65 250.8 125 96.8
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 4.2e-39 165.2 89 88.8
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 4.2e-39 165.2 89 88.8
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 2.1e-38 162.9 89 84.3
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 2.3e-37 159.5 89 84.3
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 4.1e-34 148.7 89 78.7
TAR636G1163 Trochodendron aralioides HOM05D002270 ORTHO05D002866 4.1e-34 148.7 90 76.7
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 4.5e-33 145.2 84 81.0
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 1.3e-32 143.7 89 78.7
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 1.1e-31 140.6 89 74.2
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 3.3e-31 139.0 89 69.7
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 7.3e-31 137.9 81 79.0
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 7.3e-31 137.9 89 70.8
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 9.5e-31 137.5 85 75.3
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 1.2e-30 137.1 81 75.3
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 4.7e-30 135.2 114 60.5
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 8.0e-30 134.4 89 73.0
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 1.0e-29 134.0 89 73.0
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 1.4e-29 133.7 89 69.7
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 8.9e-29 131.0 66 92.4
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 1.2e-28 130.6 88 69.3
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 2.6e-28 129.4 77 79.2
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 3.4e-28 129.0 90 67.8
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 4.4e-28 128.6 79 73.4
ECA232G4141 Erigeron canadensis HOM05D002270 ORTHO05D002866 7.5e-28 127.9 85 71.8
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 1.3e-27 127.1 65 90.8
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.3e-27 127.1 63 92.1
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.7e-27 126.7 68 82.4
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 1.7e-27 126.7 63 92.1
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 2.2e-27 126.3 89 68.5
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 2.2e-27 126.3 95 66.3
Hund05751 Selenicereus undatus HOM05D002270 ORTHO05D002866 2.9e-27 125.9 69 81.2
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 3.7e-27 125.6 68 80.9
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 4.9e-27 125.2 74 77.0
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 8.3e-27 124.4 83 68.7
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 8.3e-27 124.4 67 82.1
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 8.3e-27 124.4 68 80.9
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 1.1e-26 124.0 72 80.6
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.1e-26 124.0 72 80.6
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.1e-26 124.0 72 80.6
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 1.1e-26 124.0 72 80.6
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 1.4e-26 123.6 82 70.7
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 1.4e-26 123.6 107 62.6
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 1.9e-26 123.2 68 79.4
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 2.4e-26 122.9 72 79.2
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 4.1e-26 122.1 84 67.9
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 5.4e-26 121.7 74 79.7
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 5.4e-26 121.7 84 69.0
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 5.4e-26 121.7 68 82.4
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 5.4e-26 121.7 68 82.4
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 7.0e-26 121.3 72 79.2
ATR0736G169 Amborella trichopoda HOM05D002270 ORTHO05D002866 9.2e-26 120.9 143 47.6
COL.COLO4_12568 Corchorus olitorius HOM05D002270 ORTHO05D002866 9.2e-26 120.9 72 76.4
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 9.2e-26 120.9 68 82.4
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.6e-25 120.2 65 83.1
SEGI_27232 Sequoiadendron giganteum HOM05D002270 ORTHO05D000001 1.6e-25 120.2 89 59.6
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.0e-25 119.8 65 81.5
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.0e-25 119.8 65 81.5
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 3.5e-25 119.0 65 81.5
Cpa.g.sc30.11 Carica papaya HOM05D002270 ORTHO05D002866 3.5e-25 119.0 93 61.3
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 3.5e-25 119.0 65 83.1
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 6.0e-25 118.2 73 72.6
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 6.0e-25 118.2 68 77.9
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 6.0e-25 118.2 65 84.6
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 7.8e-25 117.9 65 80.0
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 7.8e-25 117.9 65 80.0
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 7.8e-25 117.9 68 76.5
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 3.0e-24 115.9 81 67.9
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 5.0e-24 115.2 65 76.9
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 6.6e-24 114.8 66 77.3
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 6.6e-24 114.8 73 74.0
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 6.6e-24 114.8 73 74.0
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.1e-23 114.0 65 78.5
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 1.1e-23 114.0 65 78.5
Lalb_Chr20g0113901 Lupinus albus HOM05D002270 ORTHO05D002866 1.1e-23 114.0 88 61.4
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.5e-23 113.6 68 76.5
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.5e-23 113.6 65 75.4
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 1.9e-23 113.2 66 74.2
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 1.9e-23 113.2 66 74.2
TPR.G9777 Trifolium pratense HOM05D002270 ORTHO05D002866 2.5e-23 112.8 73 71.2
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 3.3e-23 112.5 66 74.2
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 3.3e-23 112.5 76 72.4
SHI16813 Sapria himalayana HOM05D002270 ORTHO05D002866 5.6e-23 111.7 65 75.4
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 9.5e-23 110.9 65 78.5
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 9.5e-23 110.9 65 78.5
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 9.5e-23 110.9 93 60.2
TPR.G29953 Trifolium pratense HOM05D002270 ORTHO05D002866 1.6e-22 110.2 78 67.9
VMungo0464G0518 Vigna mungo HOM05D002270 ORTHO05D002866 2.1e-22 109.8 73 71.2
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 3.6e-22 109.0 92 60.9
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 4.7e-22 108.6 66 71.2
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 8.0e-22 107.8 73 69.9
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 1.1e-21 107.5 92 58.7
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 1.1e-21 107.5 92 58.7
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.4e-21 107.1 65 73.8
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 2.3e-21 106.3 82 62.2
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 2.3e-21 106.3 71 71.8
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 3.1e-21 105.9 66 69.7
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 4.0e-21 105.5 127 47.2
MCO14G508 Micromonas commoda HOM05D002270 ORTHO05D002866 1.4e-18 97.1 65 67.7
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 5.4e-18 95.1 75 61.3
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 1.2e-17 94.0 65 60.0
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 6.0e-17 91.7 47 87.2
vmacro22218 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 5.1e-16 88.6 107 51.4
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 4.7e-14 82.0 54 64.8
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea HOM05D002270 ORTHO05D002866 1.2e-09 67.4 55 56.4
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 2.1e-09 66.6 55 56.4
VMungo1383G2297 Vigna mungo HOM05D002270 ORTHO05D002866 1.5e-07 60.5 44 65.9
C02p22550 Brassica napus HOM05D002270 ORTHO05D002866 2.1e-06 56.6 66 45.5
CBR_g742 Chara braunii HOM05D002270 ORTHO05D002866 2.1e-06 56.6 62 48.4
Cpa.g.sc30.12 Carica papaya HOM05D002270 ORTHO05D002866 6.2e-06 55.1 98 34.7


User provided reference genes

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