Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 7.7e-129 463.8 225 100.0
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 3.8e-112 408.3 218 94.5
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 2.0e-105 386.0 217 87.6
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 5.0e-104 381.3 217 86.6
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 2.8e-102 375.6 217 85.3
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.8e-101 372.9 217 84.8
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 2.2e-75 286.2 220 65.0
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 3.2e-74 282.3 218 65.1
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 7.1e-74 281.2 220 63.2
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.2e-73 280.4 220 64.1
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 6.6e-72 274.6 219 62.1
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 2.5e-71 272.7 220 61.8
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 3.3e-71 272.3 218 61.5
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 9.6e-71 270.8 220 63.6
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 4.7e-70 268.5 220 63.6
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.4e-69 266.9 219 63.0
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.4e-69 266.9 219 63.0
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 2.4e-69 266.2 223 62.8
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 1.2e-68 263.8 219 63.0
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 1.5e-68 263.5 218 63.8
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 4.4e-68 261.9 194 67.0
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 9.9e-68 260.8 219 61.2
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 1.7e-67 260.0 189 65.1
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 3.8e-67 258.8 224 61.6
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 3.8e-67 258.8 218 61.0
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 1.1e-66 257.3 221 60.2
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 3.2e-66 255.8 171 70.8
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 2.1e-65 253.1 218 58.3
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 4.6e-65 251.9 222 57.7
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 6.0e-65 251.5 220 59.5
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 1.0e-64 250.8 222 58.1
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 1.7e-64 250.0 207 62.8
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.3e-64 249.6 219 56.6
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 3.0e-64 249.2 220 56.8
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 3.9e-64 248.8 219 57.1
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 3.9e-64 248.8 222 58.6
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 3.9e-64 248.8 219 61.6
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 6.6e-64 248.1 220 57.7
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 6.6e-64 248.1 222 61.3
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 1.9e-63 246.5 189 62.4
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 2.5e-63 246.1 220 57.3
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 2.5e-63 246.1 218 58.7
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 3.3e-63 245.7 158 74.1
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 3.3e-63 245.7 220 57.3
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 4.3e-63 245.4 220 56.4
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 5.6e-63 245.0 222 58.1
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 7.3e-63 244.6 220 55.0
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 7.3e-63 244.6 158 70.3
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 7.3e-63 244.6 220 58.2
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 7.3e-63 244.6 218 57.3
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 9.6e-63 244.2 219 60.7
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 2.1e-62 243.0 222 57.2
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 2.1e-62 243.0 222 57.7
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 2.8e-62 242.7 221 56.1
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 3.6e-62 242.3 222 55.0
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 6.2e-62 241.5 218 56.4
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 6.2e-62 241.5 217 56.7
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 1.1e-61 240.7 206 61.7
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 2.4e-61 239.6 221 59.3
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 5.3e-61 238.4 217 56.7
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 6.9e-61 238.0 217 57.1
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.5e-60 236.9 158 71.5
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.5e-60 236.9 158 70.9
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 2.0e-60 236.5 217 56.2
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 2.0e-60 236.5 158 68.4
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 2.6e-60 236.1 217 56.2
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 2.6e-60 236.1 217 56.2
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 2.6e-60 236.1 217 55.3
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 4.4e-60 235.3 219 55.3
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 4.4e-60 235.3 175 65.1
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 5.8e-60 235.0 217 56.2
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 7.6e-60 234.6 221 56.1
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 1.3e-59 233.8 219 57.1
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.7e-59 233.4 173 65.9
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 2.2e-59 233.0 173 65.9
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 2.9e-59 232.6 202 60.4
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 4.9e-59 231.9 217 55.3
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 4.9e-59 231.9 218 54.6
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 6.4e-59 231.5 188 61.2
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 1.1e-58 230.7 158 70.3
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.9e-58 229.9 218 56.9
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 3.2e-58 229.2 217 54.8
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 3.2e-58 229.2 220 56.4
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 1.3e-54 217.2 217 51.2
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.3e-54 217.2 220 52.7
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 6.2e-54 214.9 223 52.5
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.5e-52 210.3 199 56.3
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 2.0e-52 209.9 141 69.5
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 7.1e-50 201.4 152 62.5
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 6.0e-49 198.4 218 48.2
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 3.4e-44 182.6 219 44.7
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 1.0e-43 181.0 226 47.3
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 2.7e-41 172.9 232 43.1
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 3.0e-40 169.5 162 54.9
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 1.1e-39 167.5 144 51.4
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 2.1e-38 163.3 139 56.1
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 3.7e-38 162.5 134 53.0
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 1.6e-33 147.1 170 44.1
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 8.7e-32 141.4 148 47.3
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.6e-30 137.1 150 56.0
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.5e-28 130.6 146 43.2
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 5.0e-27 125.6 140 51.4
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.2e-25 120.9 82 65.9
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 2.4e-21 106.7 52 90.4
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 9.7e-15 84.7 54 74.1
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 1.3e-14 84.3 149 34.9
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 2.7e-09 66.6 44 63.6


User provided reference genes

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