Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 0.0e+00 1526.5 761 100.0
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 0.0e+00 1177.2 830 75.2
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 0.0e+00 1172.1 830 75.2
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 0.0e+00 1156.7 832 72.8
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 0.0e+00 1120.9 752 77.4
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 4.3e-208 728.8 455 84.2
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 1.3e-204 717.2 826 48.7
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 1.1e-198 697.6 863 45.4
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 1.4e-198 697.2 837 46.2
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 2.1e-194 683.3 831 46.2
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 3.3e-192 676.0 758 50.3
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 8.5e-188 661.4 826 46.2
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 7.2e-187 658.3 844 45.9
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 1.8e-185 653.7 657 53.7
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 8.5e-180 634.8 828 43.6
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 1.4e-177 627.5 798 46.0
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 7.5e-176 621.7 836 43.8
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 1.7e-175 620.5 837 43.7
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 3.8e-172 609.4 829 42.5
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 8.5e-172 608.2 822 44.3
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 4.7e-170 602.4 834 42.3
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 4.0e-169 599.4 834 42.2
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 1.2e-168 597.8 831 42.7
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 2.4e-166 590.1 832 42.7
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 3.1e-166 589.7 831 43.4
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 9.1e-166 588.2 816 41.7
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 2.7e-165 586.6 708 46.8
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 5.9e-165 585.5 804 43.0
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 5.9e-165 585.5 825 40.7
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 1.1e-163 581.3 826 42.4
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 5.5e-163 578.9 862 41.5
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 3.6e-162 576.2 836 42.2
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 3.6e-162 576.2 867 41.6
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 6.1e-162 575.5 654 48.8
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 5.2e-161 572.4 901 37.8
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 3.4e-160 569.7 831 41.6
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 1.3e-159 567.8 867 40.5
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 1.3e-159 567.8 862 40.8
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 1.7e-159 567.4 619 49.4
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 2.8e-159 566.6 862 40.8
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 2.4e-158 563.5 810 41.9
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 5.4e-158 562.4 754 43.8
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 1.2e-157 561.2 651 49.8
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 4.5e-157 559.3 831 40.9
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 1.2e-154 551.2 671 47.4
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 2.0e-152 543.9 779 40.7
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 1.1e-150 538.1 809 39.2
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 1.4e-150 537.7 800 39.0
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 2.4e-150 537.0 755 41.9
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 3.2e-150 536.6 749 41.7
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 1.2e-149 534.6 642 45.3
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 2.7e-149 533.5 803 39.9
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 3.0e-148 530.0 757 40.2
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 8.6e-148 528.5 824 39.0
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 1.1e-147 528.1 802 39.3
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 2.1e-146 523.9 754 39.7
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 1.5e-144 517.7 698 43.0
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 3.4e-144 516.5 642 44.9
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 5.8e-144 515.8 804 39.8
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 1.9e-142 510.8 662 44.1
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 3.5e-141 506.5 654 45.1
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 1.3e-135 488.0 737 41.1
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 4.1e-134 483.0 807 37.3
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 5.4e-134 482.6 515 51.1
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 9.9e-128 461.8 534 49.4
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 2.9e-119 433.7 760 37.4
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 2.8e-114 417.2 730 37.7
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 1.4e-110 404.8 523 45.1
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 6.7e-108 396.0 648 37.8
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 6.7e-108 396.0 400 55.2
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 1.1e-97 362.1 826 30.6
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 1.9e-94 351.3 642 37.1
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 7.9e-93 345.9 598 37.3
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 1.3e-92 345.1 675 35.7
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 6.9e-89 332.8 340 50.6
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 2.9e-87 327.4 326 53.7
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 4.8e-82 310.1 498 38.8
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 6.3e-82 309.7 335 49.3
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 2.2e-74 284.6 240 60.8
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 4.1e-73 280.4 419 38.9
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 8.5e-71 272.7 501 35.7
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 4.0e-68 263.8 317 48.3
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 3.6e-61 240.7 198 60.1
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 2.3e-60 238.0 198 60.1
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 1.5e-54 218.8 385 38.4
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 4.5e-48 197.2 724 25.7
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 3.8e-47 194.1 338 34.6
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 5.7e-43 180.3 658 28.3
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 3.6e-37 161.0 356 33.7
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 8.0e-37 159.8 772 24.0
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.0e-35 155.2 171 53.2
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 2.0e-32 145.2 116 62.9
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 1.3e-31 142.5 199 40.7
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 7.3e-30 136.7 185 44.3
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 2.6e-27 128.3 136 52.2
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.7e-26 125.6 278 32.0
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 3.7e-18 97.8 242 28.1
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 5.4e-17 94.0 95 46.3
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 8.1e-13 80.1 84 47.6
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 1.9e-09 68.9 179 26.3
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 3.5e-08 64.7 235 25.1
CSS0045256 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 7.8e-08 63.5 53 56.6
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 5.1e-07 60.8 90 34.4
Gohir.A08G116400 Gossypium hirsutum HOM05D000530 ORTHO05D000621 2.5e-06 58.5 278 27.7
Gohir.D08G137200 Gossypium hirsutum HOM05D000530 ORTHO05D000621 5.6e-06 57.4 278 27.7
CAN.G962.8 Capsicum annuum HOM05D003632 ORTHO05D001064 7.3e-06 57.0 34 82.4


User provided reference genes

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