Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000342g0190 Nicotiana tabacum HOM05D006440 ORTHO05D003987 1.0e-240 836.3 409 100.0
Sopen09g032600 Solanum pennellii HOM05D006440 ORTHO05D003987 2.8e-209 731.9 519 73.0
Nitab4.5_0008345g0020 Nicotiana tabacum HOM05D006440 ORTHO05D003987 1.3e-206 723.0 497 75.3
CAN.G793.7 Capsicum annuum HOM05D006440 ORTHO05D003987 3.7e-198 694.9 522 69.7
Thecc.04G250600 Theobroma cacao HOM05D006440 ORTHO05D003987 1.5e-191 672.9 438 74.9
Cc03_g05160 Coffea canephora HOM05D006440 ORTHO05D003987 2.7e-188 662.1 526 64.3
CSS0026181 Camellia sinensis var. sinensis HOM05D006440 ORTHO05D003987 1.6e-185 652.9 533 64.0
Oeu025570.2 Olea europaea HOM05D006440 ORTHO05D000397 1.8e-184 649.4 530 63.8
Ciclev10004596m.g Citrus clementina HOM05D006440 ORTHO05D003987 1.3e-182 643.3 533 62.3
Solyc09g089660.4 Solanum lycopersicum HOM05D006440 ORTHO05D003987 1.3e-182 643.3 472 71.0
QL06p016694 Quercus lobata HOM05D006440 ORTHO05D003987 1.7e-182 642.9 531 61.8
Rhsim04G0187900 Rhododendron simsii HOM05D006440 ORTHO05D003987 8.3e-182 640.6 566 60.6
HanXRQChr13g0418761 Helianthus annuus HOM05D006440 ORTHO05D003987 1.1e-181 640.2 533 62.1
MSTRG.9914 Avicennia marina HOM05D006440 ORTHO05D003987 2.1e-180 636.0 520 63.8
CiPaw.02G114500 Carya illinoinensis HOM05D006440 ORTHO05D003987 2.1e-180 636.0 531 61.6
Gohir.D09G227100 Gossypium hirsutum HOM05D006440 ORTHO05D003987 3.9e-179 631.7 514 62.6
GSVIVG01027730001 Vitis vinifera HOM05D006440 ORTHO05D003987 8.6e-179 630.6 531 60.8
Duzib212G0326 Durio zibethinus HOM05D006440 ORTHO05D003987 7.3e-178 627.5 531 61.0
Migut.G00449 Erythranthe guttata HOM05D006440 ORTHO05D003987 9.5e-178 627.1 530 61.5
Gohir.A09G225400 Gossypium hirsutum HOM05D006440 ORTHO05D003987 2.1e-177 625.9 531 60.6
Prupe.1G035000 Prunus persica HOM05D006440 ORTHO05D003987 2.8e-177 625.5 531 60.3
Atru.chr4.2134 Acer truncatum HOM05D006440 ORTHO05D003987 4.7e-177 624.8 534 60.9
SalBow2G2218 Salvia bowleyana HOM05D006440 ORTHO05D003987 8.1e-177 624.0 551 59.7
MELO3C006441.2 Cucumis melo HOM05D006440 ORTHO05D003987 1.4e-176 623.2 531 60.1
Eucgr.H03137 Eucalyptus grandis HOM05D006440 ORTHO05D003987 3.1e-176 622.1 528 61.4
CsaV3_3G012320 Cucumis sativus L. HOM05D006440 ORTHO05D003987 8.9e-176 620.5 531 59.9
Potri.008G165000 Populus trichocarpa HOM05D006440 ORTHO05D003987 1.5e-175 619.8 531 61.2
vmacro08450 Vaccinium macrocarpon HOM05D006440 ORTHO05D003987 2.6e-175 619.0 605 56.0
Potri.010G073600 Populus trichocarpa HOM05D006440 ORTHO05D003987 4.4e-175 618.2 531 60.5
Sed0013572 Sechium edule HOM05D006440 ORTHO05D003987 1.3e-174 616.7 526 60.1
DCAR_027296 Daucus carota HOM05D006440 ORTHO05D003987 1.9e-173 612.8 531 60.6
MD13G1210600 Malus domestica HOM05D006440 ORTHO05D003987 2.4e-173 612.5 531 59.1
TAR365G0504 Trochodendron aralioides HOM05D006440 ORTHO05D003987 4.2e-173 611.7 531 59.3
TWI09G0180 Tripterygium wilfordii HOM05D006440 ORTHO05D003987 9.2e-173 610.5 531 59.1
Manes.03G166900 Manihot esculenta HOM05D006440 ORTHO05D003987 6.0e-172 607.8 531 59.7
CANSAT78G1511 Cannabis sativa HOM05D006440 ORTHO05D003987 1.7e-171 606.3 530 59.4
COL.COLO4_15832 Corchorus olitorius HOM05D006440 ORTHO05D003987 2.3e-171 605.9 530 59.2
Nn1g02707 Nelumbo nucifera HOM05D006440 ORTHO05D003987 3.0e-171 605.5 536 58.4
Sc25g0004030 Simmondsia chinensis HOM05D006440 ORTHO05D003987 1.2e-169 600.1 530 59.1
Lalb_Chr02g0150571 Lupinus albus HOM05D006440 ORTHO05D003987 2.8e-169 599.0 531 57.4
Peaxi162Scf00024g01821 Petunia axillaris HOM05D006440 ORTHO05D003987 1.4e-168 596.7 455 68.4
Psat6g132960 Pisum sativum HOM05D006440 ORTHO05D003987 1.4e-168 596.7 467 64.0
SGA_v2.0_scaffold88G27269 Striga asiatica HOM05D006440 ORTHO05D003987 5.3e-168 594.7 524 60.3
Dinv29887 Davidia involucrata HOM05D006440 ORTHO05D003188 2.0e-167 592.8 489 63.8
arahy.Tifrunner.gnm1.ann1.WJ3SQN Arachis hypogaea HOM05D006440 ORTHO05D003987 2.6e-167 592.4 525 58.1
Ca_09816_v3 Cicer arietinum L. HOM05D006440 ORTHO05D003987 4.4e-167 591.7 532 57.0
Lsat_1_v5_gn_3_121341 Lactuca sativa HOM05D006440 ORTHO05D003987 1.4e-165 586.6 511 61.1
Aqoxy2G03617 Aquilegia oxysepala HOM05D006440 ORTHO05D003987 2.4e-165 585.9 527 56.4
Medtr1g073920 Medicago truncatula HOM05D006440 ORTHO05D003987 3.2e-165 585.5 533 56.8
PGR004G0512 Punica granatum HOM05D006440 ORTHO05D003987 3.2e-165 585.5 525 57.9
ECA240G3037 Erigeron canadensis HOM05D006440 ORTHO05D003987 3.9e-163 578.6 509 59.5
Sabra10G0034700 Salix brachista HOM05D006440 ORTHO05D003987 1.5e-162 576.6 570 55.1
Lj5g0005322 Lotus japonicus HOM05D006440 ORTHO05D003987 5.6e-162 574.7 531 56.3
FAN17G2886 Fragaria x ananassa HOM05D006440 ORTHO05D003987 1.1e-160 570.5 533 56.1
RcHm_v2.0_Chr4g0391871 Rosa chinensis HOM05D006440 ORTHO05D003987 1.1e-160 570.5 533 55.9
PSO017G7287 Papaver somniferum HOM05D006440 ORTHO05D003987 4.0e-160 568.5 524 55.0
ClCG05G004420 Citrullus lanatus HOM05D006440 ORTHO05D003987 5.3e-160 568.2 570 53.7
Glyma.10G188100 Glycine max HOM05D006440 ORTHO05D003987 6.9e-160 567.8 515 56.5
FvH4_4g03210 Fragaria vesca HOM05D006440 ORTHO05D003987 1.2e-159 567.0 533 55.9
arahy.Tifrunner.gnm1.ann1.A0C0SS Arachis hypogaea HOM05D006440 ORTHO05D003987 4.5e-159 565.1 517 57.4
PSO063G3815 Papaver somniferum HOM05D006440 ORTHO05D003987 1.7e-158 563.1 524 54.4
EL10Ac3g05914 Beta vulgaris HOM05D006440 ORTHO05D003987 6.4e-158 561.2 531 55.6
Phvul.007G129000 Phaseolus vulgaris HOM05D006440 ORTHO05D003987 5.4e-157 558.1 530 55.3
Glyma.20G202700 Glycine max HOM05D006440 ORTHO05D003987 9.3e-157 557.4 530 54.7
VMungo0720G1034 Vigna mungo HOM05D006440 ORTHO05D003987 2.7e-156 555.8 530 55.1
MBI18_g37356_MAGBIO Magnolia biondii HOM05D006440 ORTHO05D003987 7.9e-156 554.3 578 51.9
Hund04543 Selenicereus undatus HOM05D006440 ORTHO05D003987 6.7e-155 551.2 529 55.8
THA.LOC104815988 Tarenaya hassleriana HOM05D006440 ORTHO05D003987 3.3e-154 548.9 520 53.7
AUR62015479 Chenopodium quinoa HOM05D006440 ORTHO05D003987 1.3e-150 537.0 532 54.9
Aa31LG5G3660 Aethionema arabicum HOM05D006440 ORTHO05D003987 3.2e-149 532.3 520 54.0
FAN12G1575 Fragaria x ananassa HOM05D006440 ORTHO05D003987 7.1e-149 531.2 533 53.7
FAN22G0224 Fragaria x ananassa HOM05D006440 ORTHO05D003987 9.3e-149 530.8 533 53.5
Thhalv10003170m.g Eutrema salsugineum HOM05D006440 ORTHO05D003987 1.2e-148 530.4 523 52.0
Sp2g08350 Schrenkiella parvula HOM05D006440 ORTHO05D003987 1.2e-148 530.4 523 52.0
Gorai.006G249000 Gossypium raimondii HOM05D006440 ORTHO05D003987 1.6e-148 530.0 485 57.9
Ah.07g207430 Amaranthus hybridus HOM05D006440 ORTHO05D003987 5.1e-147 525.0 505 56.2
BcaB07g30569 Brassica carinata HOM05D006440 ORTHO05D003987 3.7e-145 518.8 517 51.6
AL8G16820 Arabidopsis lyrata HOM05D006440 ORTHO05D003987 5.8e-143 511.5 520 52.5
Os04g0177600 Oryza sativa ssp. japonica HOM05D006440 ORTHO05D003987 5.8e-143 511.5 521 50.9
Carub.0008s0511 Capsella rubella HOM05D006440 ORTHO05D003987 1.0e-142 510.8 518 51.7
A02p27870 Brassica napus HOM05D006440 ORTHO05D003987 1.3e-142 510.4 507 51.7
BraA02t07826Z Brassica rapa HOM05D006440 ORTHO05D003987 1.3e-142 510.4 507 51.7
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 2.9e-142 509.2 484 55.2
C02p44000 Brassica napus HOM05D006440 ORTHO05D003987 4.9e-142 508.4 523 50.7
CDE06G0279 Ceratophyllum demersum HOM05D006440 ORTHO05D003987 4.9e-142 508.4 531 52.5
Actinidia04464 Actinidia chinensis HOM05D006440 ORTHO05D003987 1.2e-140 503.8 453 59.6
AT5G43500 Arabidopsis thaliana HOM05D006440 ORTHO05D003987 4.6e-140 501.9 521 51.4
BolC2t10447H Brassica oleracea HOM05D006440 ORTHO05D003987 4.6e-140 501.9 522 50.4
unitig_748.g7321 Utricularia gibba HOM05D006440 ORTHO05D003987 6.1e-140 501.5 529 51.8
AUR62002263 Chenopodium quinoa HOM05D006440 ORTHO05D003987 3.9e-139 498.8 619 47.2
BcaC03g16584 Brassica carinata HOM05D006440 ORTHO05D003987 5.1e-139 498.4 336 67.9
Lj6A660T45 Lonicera japonica HOM05D006440 ORTHO05D003987 5.3e-136 488.4 540 52.8
Manes.15G038500 Manihot esculenta HOM05D006440 ORTHO05D003987 5.9e-135 485.0 500 53.6
CARHR180120 Cardamine hirsuta HOM05D006440 ORTHO05D003987 2.2e-134 483.0 521 48.6
ATR0680G034 Amborella trichopoda HOM05D006440 ORTHO05D003987 3.9e-131 472.2 500 51.2
PGSC0003DMG400017256 Solanum tuberosum HOM05D006440 ORTHO05D003987 2.7e-124 449.5 233 92.3
Haze_11338 Corylus avellana HOM05D006440 ORTHO05D003987 5.7e-122 441.8 591 43.8
Mapoly0028s0034 Marchantia polymorpha HOM05D006440 ORTHO05D003987 5.4e-96 355.5 353 51.3
Psat2g067040 Pisum sativum HOM05D006440 ORTHO05D003987 9.5e-93 344.7 234 69.7
Pp3c3_14850 Physcomitrium patens HOM05D006440 ORTHO05D003987 4.3e-85 319.3 349 48.1
MD16G1213700 Malus domestica HOM05D006440 ORTHO05D003987 7.5e-82 308.5 414 42.3
Cpa.g.sc44.85 Carica papaya HOM05D006440 ORTHO05D003987 1.1e-80 304.7 205 72.7
Zm00001eb087460 Zea mays HOM05D006440 ORTHO05D003987 1.4e-80 304.3 243 59.3
SMO117G0008 Selaginella moellendorffii HOM05D006440 ORTHO05D003987 7.3e-77 292.0 423 40.4
HPP92_008424 Vanilla planifolia HOM05D006440 ORTHO05D003987 1.1e-69 268.1 326 45.4
HPP92_027995 Vanilla planifolia HOM05D006440 ORTHO05D003987 9.3e-56 221.9 167 61.7
CBR_g37544 Chara braunii HOM05D000019 ORTHO05D000002 5.4e-40 169.5 265 40.0
HanXRQChr13g0422461 Helianthus annuus HOM05D006440 ORTHO05D003987 1.9e-32 144.4 81 80.2
Hma1.2p1_1716F.1_g299120 Hydrangea macrophylla HOM05D006440 ORTHO05D003987 8.2e-28 129.0 65 86.2
HanXRQChr13g0422471 Helianthus annuus HOM05D006440 ORTHO05D003987 2.5e-21 107.5 84 64.3
SHI00689 Sapria himalayana HOM05D006440 ORTHO05D003987 3.4e-18 97.1 64 78.1
HPP92_008423 Vanilla planifolia HOM05D006440 ORTHO05D003987 1.3e-17 95.1 82 57.3
Zm00001eb087470 Zea mays HOM05D006440 ORTHO05D003987 4.3e-13 80.1 220 30.0
MD16G1213300 Malus domestica HOM05D006440 ORTHO05D003987 2.6e-10 70.9 45 66.7
Cfa026271 Carpinus fangiana HOM05D006440 ORTHO05D003987 6.5e-09 66.2 159 29.6
Haze_11337 Corylus avellana HOM05D006440 ORTHO05D003987 5.5e-08 63.2 32 90.6
Dinv44661 Davidia involucrata HOM05D006440 ORTHO05D003987 9.4e-08 62.4 45 66.7
Nn5g28601 Nelumbo nucifera HOM05D006440 ORTHO05D003987 1.8e-06 58.2 54 50.0
arahy.Tifrunner.gnm1.ann1.IPBD8F Arachis hypogaea HOM05D002333 ORTHO05D003987 8.8e-06 55.8 61 47.5


User provided reference genes

Program Settings