Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000306g0140 Nicotiana tabacum HOM05D000004 ORTHO05D000563 4.1e-84 314.7 160 100.0
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-13 80.5 113 35.4
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-13 80.5 113 35.4
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-13 80.5 113 35.4
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-13 80.5 113 35.4
PGR119G0902 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-13 80.5 113 35.4
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-13 80.5 113 35.4
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-13 80.5 113 35.4
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-13 80.5 113 35.4
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.9e-13 79.3 132 32.6
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 2.9e-13 79.3 132 32.6
Cpa.g.sc303.9 Carica papaya HOM05D000004 ORTHO05D000563 3.8e-13 79.0 181 32.6
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 3.8e-13 79.0 135 32.6
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 3.8e-13 79.0 135 32.6
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 3.8e-13 79.0 135 32.6
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 6.5e-13 78.2 135 32.6
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 8.4e-13 77.8 132 31.8
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 8.4e-13 77.8 132 31.8
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 8.4e-13 77.8 132 31.8
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-12 77.4 135 32.6
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-12 77.4 135 32.6
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-12 77.0 135 31.9
PGR142G0162 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-12 77.0 133 33.8
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-12 76.6 134 32.8
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-12 76.6 129 32.6
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-12 76.3 132 31.8
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 3.2e-12 75.9 135 31.9
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.2e-12 75.5 129 31.8
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 5.5e-12 75.1 129 31.8
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.7 132 31.1
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.7 132 31.1
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.7 132 31.1
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.7 132 31.1
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.7 132 31.1
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.7 132 31.1
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.7 132 31.1
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.7 132 31.1
THA.LOC109117128 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.1e-12 74.7 160 28.8
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-11 73.9 132 32.6
Cpa.g.sc391.4 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-11 73.9 132 31.8
Cpa.g.sc138.37 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-11 73.6 117 35.0
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 2.7e-11 72.8 105 35.2
Cpa.g.sc1083.1 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-11 72.0 119 32.8
Cpa.g.sc88.32 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-11 72.0 181 30.4
SHI50602 Sapria himalayana HOM05D000004 ORTHO05D000002 4.6e-11 72.0 98 36.7
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 6.1e-11 71.6 183 27.3
SHI40836 Sapria himalayana HOM05D000004 ORTHO05D000563 6.1e-11 71.6 98 36.7
SHI44485 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-11 71.6 98 36.7
SHI47695 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-11 71.6 98 36.7
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 7.9e-11 71.2 132 31.1
SHI01700 Sapria himalayana HOM05D000004 ORTHO05D000563 7.9e-11 71.2 98 35.7
SHI30189 Sapria himalayana HOM05D000004 ORTHO05D000563 7.9e-11 71.2 98 35.7
SHI39813 Sapria himalayana HOM05D000004 ORTHO05D000563 7.9e-11 71.2 109 35.8
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-10 70.9 132 31.1
Cpa.g.sc440.2 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-10 70.5 132 29.5
SHI51310 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-10 70.5 98 36.7
Cpa.g.sc210.4 Carica papaya HOM05D000004 ORTHO05D000002 1.8e-10 70.1 173 30.1
Cpa.g.sc24.81 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-10 70.1 94 34.0
Cpa.g.sc28.154 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-10 70.1 132 30.3
Cpa.g.sc35.66 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-10 70.1 94 33.0
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 2.3e-10 69.7 98 34.7
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 2.3e-10 69.7 98 34.7
Cpa.g.sc154.5 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-10 69.7 142 30.3
Cpa.g.sc210.2 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-10 69.7 160 29.4
Cpa.g.sc445.2 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-10 69.7 117 31.6
Cpa.g.sc79.56 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-10 69.7 132 30.3
Cpa.g.sc971.2 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-10 69.7 108 31.5
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 2.3e-10 69.7 169 27.8
SHI47357 Sapria himalayana HOM05D000004 ORTHO05D000002 2.3e-10 69.7 98 36.7
SHI47629 Sapria himalayana HOM05D000004 ORTHO05D000563 2.3e-10 69.7 94 37.2
SHI48591 Sapria himalayana HOM05D000004 ORTHO05D000002 2.3e-10 69.7 98 36.7
Cpa.g.sc2066.1 Carica papaya HOM05D000004 ORTHO05D000563 3.0e-10 69.3 94 33.0
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-10 69.3 165 27.9
SHI39856 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-10 69.3 97 35.1
SHI49269 Sapria himalayana HOM05D000004 ORTHO05D000563 3.0e-10 69.3 98 35.7
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-10 68.9 183 26.2
Cpa.g.sc28.107 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-10 68.9 132 30.3
Cpa.g.sc30.31 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-10 68.9 168 28.6
SHI37899 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-10 68.9 98 36.7
SHI45547 Sapria himalayana HOM05D000004 ORTHO05D000563 3.9e-10 68.9 123 34.1
Cpa.g.sc0.192 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-10 68.6 108 31.5
Cpa.g.sc32.163 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-10 68.6 108 32.4
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-10 68.6 132 29.5
Cpa.g.sc38.3 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-10 68.6 108 32.4
SHI45527 Sapria himalayana HOM05D000004 ORTHO05D000002 5.1e-10 68.6 123 34.1
Cpa.g.sc143.12 Carica papaya HOM05D000004 ORTHO05D000563 6.7e-10 68.2 90 33.3
Cpa.g.sc782.1 Carica papaya HOM05D000004 ORTHO05D000563 6.7e-10 68.2 130 33.8
SHI24090 Sapria himalayana HOM05D000004 ORTHO05D000002 6.7e-10 68.2 94 36.2
SHI47910 Sapria himalayana HOM05D000004 ORTHO05D000002 6.7e-10 68.2 109 35.8
SHI48187 Sapria himalayana HOM05D000004 ORTHO05D000002 6.7e-10 68.2 109 35.8
SHI50082 Sapria himalayana HOM05D000004 ORTHO05D000002 6.7e-10 68.2 97 34.0
Cpa.g.sc1884.2 Carica papaya HOM05D000004 ORTHO05D000563 8.7e-10 67.8 158 27.8
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 8.7e-10 67.8 132 30.3
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 8.7e-10 67.8 108 33.3
SHI43913 Sapria himalayana HOM05D000004 ORTHO05D000002 8.7e-10 67.8 98 34.7
SHI33286 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-09 67.4 94 36.2
SHI47627 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-09 67.4 98 34.7
SHI54829 Sapria himalayana HOM05D000004 ORTHO05D000563 1.1e-09 67.4 98 34.7
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.1e-09 67.4 122 32.8
Cpa.g.sc11.81 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-09 67.0 132 29.5
Cpa.g.sc22.44 Carica papaya HOM05D000004 ORTHO05D000002 1.5e-09 67.0 114 33.3
SHI37133 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-09 67.0 184 27.2
SHI45492 Sapria himalayana HOM05D000004 ORTHO05D000002 1.9e-09 66.6 108 34.3
SHI46426 Sapria himalayana HOM05D000004 ORTHO05D000563 1.9e-09 66.6 154 27.9
TPR.G39664 Trifolium pratense HOM05D000004 ORTHO05D000563 1.9e-09 66.6 92 35.9
Cpa.g.sc28.97 Carica papaya HOM05D000004 ORTHO05D000563 2.5e-09 66.2 132 28.0
SHI45481 Sapria himalayana HOM05D000004 ORTHO05D000002 2.5e-09 66.2 113 34.5
SHI47923 Sapria himalayana HOM05D000004 ORTHO05D000563 2.5e-09 66.2 98 34.7
SHI48037 Sapria himalayana HOM05D000004 ORTHO05D000563 2.5e-09 66.2 98 34.7
SHI50247 Sapria himalayana HOM05D000004 ORTHO05D000563 2.5e-09 66.2 98 34.7
Cpa.g.sc305.5 Carica papaya HOM05D000004 ORTHO05D000563 3.3e-09 65.9 94 30.9
SHI47494 Sapria himalayana HOM05D000004 ORTHO05D000563 3.3e-09 65.9 145 27.6
Cpa.g.sc971.1 Carica papaya HOM05D000004 ORTHO05D000563 4.3e-09 65.5 119 30.3
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-09 65.1 108 31.5
Cpa.g.sc38.5 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-09 65.1 89 34.8
Cpa.g.sc32.157 Carica papaya HOM05D000004 ORTHO05D000563 7.4e-09 64.7 132 28.0
Cpa.g.sc60.41 Carica papaya HOM05D000004 ORTHO05D000563 7.4e-09 64.7 132 26.5
SHI46673 Sapria himalayana HOM05D000004 ORTHO05D000002 7.4e-09 64.7 123 32.5
THA.LOC104818554 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.4e-09 64.7 143 27.3
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.4e-09 64.7 132 27.3
PGR142G4213 Punica granatum HOM05D000004 ORTHO05D000002 9.7e-09 64.3 81 38.3
SHI40014 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-08 63.9 94 34.0
SHI40194 Sapria himalayana HOM05D000004 ORTHO05D000563 1.3e-08 63.9 114 33.3
Cpa.g.sc28.117 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-08 63.5 94 31.9
Lalb_Chr19g0128701 Lupinus albus HOM05D000004 ORTHO05D000002 1.6e-08 63.5 130 28.5
SHI54925 Sapria himalayana HOM05D000004 ORTHO05D000563 2.2e-08 63.2 98 34.7
Cpa.g.sc0.175 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-08 62.8 132 27.3
Cpa.g.sc60.45 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-08 62.8 108 29.6
SHI35855 Sapria himalayana HOM05D000004 ORTHO05D000563 2.8e-08 62.8 124 29.0
SHI46106 Sapria himalayana HOM05D000004 ORTHO05D000002 2.8e-08 62.8 94 34.0
SHI46783 Sapria himalayana HOM05D000004 ORTHO05D000002 2.8e-08 62.8 94 34.0
SHI54914 Sapria himalayana HOM05D000004 ORTHO05D009927 2.8e-08 62.8 114 33.3
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.7e-08 62.4 112 29.5
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.7e-08 62.4 112 29.5
THA.LOC104822532 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.7e-08 62.4 112 29.5
Cpa.g.sc110.31 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-08 62.0 142 31.7
Hma1.2p1_0314F.1_g122100 Hydrangea macrophylla HOM05D000004 ORTHO05D009927 4.8e-08 62.0 131 27.5
Cpa.g.sc207.15 Carica papaya HOM05D000004 ORTHO05D000563 6.3e-08 61.6 124 30.6
SHI51545 Sapria himalayana HOM05D000004 ORTHO05D000563 6.3e-08 61.6 112 33.0
Cpa.g.sc2219.1 Carica papaya HOM05D000004 ORTHO05D000563 8.2e-08 61.2 158 27.2
Cpa.g.sc60.53 Carica papaya HOM05D000004 ORTHO05D000563 8.2e-08 61.2 90 34.4
Lj5g0019047 Lotus japonicus HOM05D000004 ORTHO05D000563 8.2e-08 61.2 116 26.7
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-07 60.8 112 31.2
Cpa.g.sc100.28 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-07 60.1 94 27.7
Cpa.g.sc225.8 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-07 60.1 99 33.3
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-07 60.1 134 25.4
THA.LOC104817122 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 1.8e-07 60.1 151 25.2
Cpa.g.sc175.28 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 59.7 94 30.9
Cpa.g.sc28.99 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 59.7 127 27.6
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 58.9 96 28.1
SHI28241 Sapria himalayana HOM05D000004 ORTHO05D000563 4.1e-07 58.9 140 30.7
THA.LOC104818534 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.1e-07 58.9 102 27.5
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 5.3e-07 58.5 79 31.6
Cpa.g.sc97.21 Carica papaya HOM05D000004 ORTHO05D000563 5.3e-07 58.5 109 25.7
PSO339G6178 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-07 58.5 128 32.8
SHI20616 Sapria himalayana HOM05D000004 ORTHO05D000002 5.3e-07 58.5 124 28.2
SHI39334 Sapria himalayana HOM05D000004 ORTHO05D000002 5.3e-07 58.5 123 33.3
CAN.G205.16 Capsicum annuum HOM05D015335 ORTHO05D000563 6.9e-07 58.2 87 35.6
Cpa.g.sc31.28 Carica papaya HOM05D000004 ORTHO05D000563 6.9e-07 58.2 90 30.0
Cpa.g.sc3290.1 Carica papaya HOM05D000004 ORTHO05D000563 6.9e-07 58.2 83 30.1
Cpa.g.sc330.2 Carica papaya HOM05D000004 ORTHO05D000563 6.9e-07 58.2 115 27.0
Cpa.g.sc40.58 Carica papaya HOM05D000004 ORTHO05D000563 6.9e-07 58.2 94 27.7
Cpa.g.sc0.37 Carica papaya HOM05D000004 ORTHO05D000563 9.0e-07 57.8 97 28.9
SHI45165 Sapria himalayana HOM05D000004 ORTHO05D000002 9.0e-07 57.8 98 32.7
SpUn0040_0007 Schrenkiella parvula HOM05D000004 ORTHO05D000563 9.0e-07 57.8 143 28.7
Cpa.g.sc0.189 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 57.4 119 28.6
Cpa.g.sc143.13 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 57.4 156 27.6
Cpa.g.sc305.2 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 57.4 154 27.3
SpUn0016_0130 Schrenkiella parvula HOM05D008042 ORTHO05D000563 1.2e-06 57.4 108 26.9
Cpa.g.sc172.9 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-06 57.0 68 38.2
Cpa.g.sc60.66 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-06 57.0 99 30.3
Cpa.g.sc949.5 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-06 57.0 71 35.2
SHI47489 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-06 57.0 107 32.7
Cpa.g.sc154.9 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-06 56.6 84 29.8
Cpa.g.sc372.1 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-06 56.6 73 34.2
PSO170G4806 Papaver somniferum HOM05D000004 ORTHO05D000563 2.0e-06 56.6 104 31.7
SpUn0002_0410 Schrenkiella parvula HOM05D008042 ORTHO05D000563 2.0e-06 56.6 104 26.0
Cpa.g.sc11.128 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-06 56.2 114 27.2
SpUn0112_0020 Schrenkiella parvula HOM05D008042 ORTHO05D000563 2.6e-06 56.2 117 26.5
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 2.6e-06 56.2 69 36.2
Cpa.g.sc8.259 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-06 55.8 90 27.8
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 4.5e-06 55.5 65 35.4
Cpa.g.sc186.6 Carica papaya HOM05D000004 ORTHO05D000563 4.5e-06 55.5 78 35.9
Cpa.g.sc3165.2 Carica papaya HOM05D000004 ORTHO05D000563 5.9e-06 55.1 66 34.8
Cpa.g.sc49.152 Carica papaya HOM05D000004 ORTHO05D000563 5.9e-06 55.1 97 27.8
Cpa.g.sc172.1 Carica papaya HOM05D000004 ORTHO05D000563 7.7e-06 54.7 133 26.3
PSO063G5223 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-06 54.7 128 28.9


User provided reference genes

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