Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 4.5e-64 247.7 117 100.0
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-16 89.0 42 95.2
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-16 89.0 42 95.2
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-16 89.0 42 95.2
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-16 89.0 42 95.2
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-16 89.0 42 95.2
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-16 89.0 42 95.2
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.3e-15 86.7 42 92.9
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 2.3e-15 85.9 42 92.9
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 2.3e-15 85.9 42 92.9
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 3.0e-15 85.5 42 90.5
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.1e-14 83.6 42 88.1
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.1e-14 83.6 42 90.5
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.1e-14 83.6 42 90.5
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.1e-14 83.6 42 90.5
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.1e-14 83.6 42 90.5
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.1e-14 83.6 42 90.5
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 1.1e-14 83.6 42 88.1
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.5e-14 83.2 42 88.1
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 1.5e-14 83.2 41 87.8
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 1.9e-14 82.8 42 88.1
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 82.0 42 90.5
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 5.6e-14 81.3 42 88.1
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 9.5e-14 80.5 42 85.7
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 2.1e-13 79.3 42 83.3
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 2.8e-13 79.0 42 83.3
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.7e-13 78.2 42 83.3
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 6.2e-13 77.8 41 85.4
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 6.2e-13 77.8 42 83.3
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 6.2e-13 77.8 42 85.7
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 6.2e-13 77.8 42 83.3
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 8.1e-13 77.4 42 85.7
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 1.4e-12 76.6 42 81.0
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 1.4e-12 76.6 44 84.1
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 1.4e-12 76.6 44 84.1
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 3.1e-12 75.5 42 83.3
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 5.2e-12 74.7 42 78.6
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 8.9e-12 73.9 42 81.0
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 8.9e-12 73.9 42 81.0
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.2e-11 73.6 42 81.0
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.4e-11 72.0 42 78.6
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 4.4e-11 71.6 42 78.6
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 5.8e-11 71.2 34 88.2
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.8e-11 71.2 42 76.2
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 7.5e-11 70.9 41 78.0
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 7.5e-11 70.9 42 81.0
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 9.9e-11 70.5 42 81.0
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 9.9e-11 70.5 42 81.0
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 9.9e-11 70.5 42 81.0
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 9.9e-11 70.5 42 81.0
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 9.9e-11 70.5 42 81.0
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 9.9e-11 70.5 42 76.2
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 1.7e-10 69.7 41 75.6
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 2.9e-10 68.9 42 78.6
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 6.4e-10 67.8 44 70.5
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 6.4e-10 67.8 44 70.5
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 6.4e-10 67.8 44 70.5
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 6.4e-10 67.8 44 70.5
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 3.0e-07 58.9 41 75.6
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 6.6e-07 57.8 40 67.5
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 6.6e-07 57.8 40 67.5
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 6.6e-07 57.8 40 67.5
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 6.6e-07 57.8 40 67.5
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 6.6e-07 57.8 40 67.5
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 6.6e-07 57.8 40 67.5
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 6.6e-07 57.8 40 67.5
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 6.6e-07 57.8 40 67.5
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.1e-06 57.0 28 92.9
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 1.5e-06 56.6 31 87.1
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 2.5e-06 55.8 34 76.5


User provided reference genes

Program Settings