Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.2e-149 533.1 272 100.0
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 2.8e-93 345.9 288 68.8
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 3.7e-93 345.5 284 68.7
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 3.7e-93 345.5 284 68.7
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 2.2e-90 336.3 286 67.1
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 6.5e-90 334.7 279 67.7
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 4.0e-87 325.5 284 66.9
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 4.4e-86 322.0 289 65.1
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 2.2e-82 309.7 277 66.4
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 4.1e-76 288.9 282 61.7
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 4.3e-65 252.3 277 56.0
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 8.0e-64 248.1 253 59.3
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 2.3e-63 246.5 277 55.2
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 3.0e-63 246.1 280 57.5
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 4.0e-63 245.7 252 59.1
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 5.2e-63 245.4 285 54.4
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 1.2e-62 244.2 290 54.1
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 1.5e-62 243.8 282 54.3
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 2.6e-62 243.0 282 53.5
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 5.7e-62 241.9 277 58.5
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 2.2e-61 240.0 272 55.5
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 2.4e-60 236.5 273 57.5
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 2.4e-60 236.5 273 57.5
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 4.1e-60 235.7 270 55.2
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 5.4e-60 235.3 278 52.9
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 7.0e-60 235.0 265 58.9
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 2.0e-59 233.4 279 53.8
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 2.7e-59 233.0 252 55.6
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 2.3e-58 229.9 286 54.9
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 2.3e-58 229.9 268 55.6
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 3.9e-58 229.2 252 56.7
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 5.0e-58 228.8 278 53.6
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 5.0e-58 228.8 277 52.0
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 2.5e-57 226.5 276 54.0
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 2.5e-57 226.5 281 53.4
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 2.5e-57 226.5 280 52.1
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 7.3e-57 224.9 260 56.2
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 9.5e-57 224.6 254 55.5
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 1.2e-56 224.2 198 66.2
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 1.6e-56 223.8 253 57.3
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 2.1e-56 223.4 260 54.6
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 2.1e-56 223.4 256 53.5
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 2.1e-56 223.4 279 53.0
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 3.6e-56 222.6 256 54.7
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 3.6e-56 222.6 277 53.4
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 4.7e-56 222.2 275 52.7
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 6.2e-56 221.9 250 55.2
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 1.4e-55 220.7 279 52.7
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 2.3e-55 219.9 255 53.3
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 4.0e-55 219.2 251 55.4
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 5.2e-55 218.8 272 50.4
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 5.2e-55 218.8 273 53.8
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 5.2e-55 218.8 253 54.2
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 2.0e-54 216.9 257 55.6
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 2.0e-54 216.9 275 50.9
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 3.4e-54 216.1 252 54.8
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 4.4e-54 215.7 274 50.4
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 5.8e-54 215.3 249 53.4
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 5.8e-54 215.3 260 52.7
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 5.8e-54 215.3 273 50.2
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 1.7e-53 213.8 254 55.5
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 2.2e-53 213.4 254 52.8
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 2.2e-53 213.4 251 54.2
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 2.2e-53 213.4 270 52.6
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 3.7e-53 212.6 255 51.8
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 4.9e-53 212.2 269 51.3
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 8.3e-53 211.5 284 51.4
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 1.1e-52 211.1 262 53.4
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 1.1e-52 211.1 273 51.3
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 1.4e-52 210.7 258 55.0
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 1.9e-52 210.3 280 51.1
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 1.9e-52 210.3 250 53.2
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 2.4e-52 209.9 267 53.9
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 2.4e-52 209.9 274 51.1
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 5.4e-52 208.8 280 50.4
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 5.4e-52 208.8 280 50.4
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 5.4e-52 208.8 280 50.4
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.4e-52 208.8 251 54.2
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.4e-52 208.8 251 53.8
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 7.0e-52 208.4 281 47.7
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 1.6e-51 207.2 282 47.2
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 2.0e-51 206.8 267 53.9
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 2.0e-51 206.8 273 49.8
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 4.6e-51 205.7 265 52.1
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 7.8e-51 204.9 257 51.4
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 1.0e-50 204.5 272 50.4
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 1.7e-50 203.8 277 50.5
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.0e-50 203.0 247 53.8
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.0e-50 203.0 247 53.8
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 3.9e-50 202.6 272 51.1
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.9e-50 202.6 247 53.8
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 3.9e-50 202.6 278 50.4
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 3.9e-50 202.6 280 49.6
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 6.6e-50 201.8 247 53.8
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 6.6e-50 201.8 281 50.2
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 8.6e-50 201.4 272 49.6
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 1.5e-49 200.7 277 49.5
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 4.3e-49 199.1 278 51.1
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 9.5e-49 198.0 277 51.3
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 1.2e-48 197.6 273 49.8
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 1.6e-48 197.2 278 49.3
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 3.6e-48 196.1 281 49.1
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 3.6e-48 196.1 252 50.4
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 3.6e-48 196.1 274 49.6
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 6.2e-48 195.3 278 48.9
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 6.2e-48 195.3 222 55.9
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 6.2e-48 195.3 263 49.0
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 6.2e-48 195.3 260 50.8
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 8.1e-48 194.9 289 47.4
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.3e-47 193.4 266 50.4
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 3.1e-47 193.0 273 47.6
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 3.1e-47 193.0 250 50.0
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 5.2e-47 192.2 266 50.8
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 5.2e-47 192.2 272 49.6
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 1.5e-46 190.7 279 45.5
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 1.7e-45 187.2 228 53.5
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 2.2e-45 186.8 249 51.0
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 2.9e-45 186.4 280 46.8
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 7.1e-44 181.8 280 45.7
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 6.0e-43 178.7 284 45.8
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 7.8e-43 178.3 262 45.0
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 3.0e-42 176.4 273 46.2
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 1.1e-41 174.5 237 48.1
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 9.5e-41 171.4 274 47.1
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 1.4e-39 167.5 278 43.9
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 1.4e-39 167.5 272 41.2
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 5.2e-39 165.6 262 45.0
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 2.0e-38 163.7 276 42.4
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 3.8e-37 159.5 243 44.0
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 1.4e-36 157.5 263 43.3
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 7.1e-36 155.2 250 46.8
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 7.8e-35 151.8 266 43.2
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 1.0e-34 151.4 260 44.6
Mapoly0140s0011 Marchantia polymorpha HOM05D003921 ORTHO05D004394 8.6e-34 148.3 272 40.8
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 1.1e-33 147.9 249 41.8
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 1.8e-31 140.6 241 46.1
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 5.2e-31 139.0 242 45.0
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.6e-30 136.7 183 50.8
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 7.6e-30 135.2 156 57.1
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 1.3e-29 134.4 301 40.9
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 3.8e-29 132.9 163 58.9
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 3.8e-29 132.9 163 58.9
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 3.2e-28 129.8 216 43.1
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis HOM05D003921 ORTHO05D004394 6.0e-27 125.6 283 33.6
MSTRG.14093 Avicennia marina HOM05D003921 ORTHO05D004394 1.3e-26 124.4 172 48.3
PRCOL_00003036 Prasinoderma coloniale HOM05D003921 ORTHO05D004394 1.5e-25 120.9 238 39.1
DCAR_018123 Daucus carota HOM05D003921 ORTHO05D004394 2.5e-25 120.2 264 37.1
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 2.5e-25 120.2 267 39.0
CBR_g18581 Chara braunii HOM05D001161 ORTHO05D000497 9.6e-25 118.2 261 37.5
Nn1g08099 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.3e-24 117.9 146 47.3
Eucgr.K01460 Eucalyptus grandis HOM05D003921 ORTHO05D004394 2.4e-23 113.6 144 47.2
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 9.0e-23 111.7 173 50.3
HPP92_008700 Vanilla planifolia HOM05D003921 ORTHO05D004394 9.0e-23 111.7 132 48.5
Nn1g01220 Nelumbo nucifera HOM05D003921 ORTHO05D004394 4.5e-22 109.4 136 50.0
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 2.9e-21 106.7 178 46.6
Ah.06g188070 Amaranthus hybridus HOM05D003921 ORTHO05D004394 3.8e-21 106.3 184 41.3
Cre07.g351750 Chlamydomonas reinhardtii HOM05D003921 ORTHO05D004394 8.4e-21 105.1 243 37.0
BcaC09g49189 Brassica carinata HOM05D003921 ORTHO05D004394 5.4e-20 102.4 182 40.1
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 1.8e-18 97.4 275 34.2
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 3.0e-18 96.7 185 39.5
MCO16G303 Micromonas commoda HOM05D003921 ORTHO05D004394 3.3e-17 93.2 207 35.3
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 4.8e-16 89.4 123 45.5
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 6.9e-15 85.5 93 61.3
Ah.06g188080 Amaranthus hybridus HOM05D003921 ORTHO05D004394 5.8e-14 82.4 68 67.6
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 7.6e-14 82.0 254 34.3
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 9.9e-14 81.6 125 48.0
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 8.4e-13 78.6 266 29.3
Actinidia25037 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.6e-11 74.3 77 57.1
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 3.9e-10 69.7 61 67.2
Actinidia13554 Actinidia chinensis HOM05D003921 ORTHO05D004394 6.7e-10 68.9 76 50.0
Gohir.D12G264333 Gossypium hirsutum HOM05D003921 ORTHO05D004394 6.7e-10 68.9 222 30.6
Actinidia39598 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.9e-09 67.4 90 43.3
Nn4g26407 Nelumbo nucifera HOM05D003921 ORTHO05D004394 3.7e-08 63.2 170 32.9
Prupe.2G115400 Prunus persica HOM05D003921 ORTHO05D004394 1.4e-07 61.2 51 66.7
Gorai.008G283700 Gossypium raimondii HOM05D003921 ORTHO05D004394 2.4e-07 60.5 252 28.6
Nn4g26401 Nelumbo nucifera HOM05D003921 ORTHO05D004394 9.0e-07 58.5 72 48.6


User provided reference genes

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