Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 6.5e-276 953.4 457 100.0
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 9.7e-264 912.9 441 99.3
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 9.8e-256 886.3 437 96.6
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 1.7e-255 885.6 441 94.8
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 2.2e-255 885.2 441 95.0
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 1.2e-253 879.4 438 95.4
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 6.3e-247 857.1 443 90.3
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 6.3e-247 857.1 443 91.0
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 2.4e-246 855.1 443 90.5
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 5.4e-246 854.0 441 91.2
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 5.4e-246 854.0 441 91.2
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 9.2e-246 853.2 441 90.7
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 1.2e-245 852.8 440 91.4
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 1.2e-245 852.8 443 89.6
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 2.7e-245 851.7 441 90.7
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 1.7e-244 849.0 441 90.2
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 2.3e-244 848.6 437 93.6
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 5.0e-244 847.4 443 89.4
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 6.6e-244 847.0 445 89.2
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 1.5e-243 845.9 443 89.2
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 1.5e-243 845.9 443 89.4
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 1.9e-243 845.5 442 89.1
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 3.3e-243 844.7 442 88.9
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 3.3e-243 844.7 442 89.1
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 3.3e-243 844.7 442 88.5
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 5.6e-243 844.0 441 89.1
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 7.3e-243 843.6 442 88.9
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 1.2e-242 842.8 445 88.8
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 1.2e-242 842.8 442 89.6
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 1.6e-242 842.4 445 88.8
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 1.6e-242 842.4 444 88.1
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 2.8e-242 841.6 441 88.2
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.8e-242 841.6 442 88.7
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 3.6e-242 841.3 441 88.7
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 8.0e-242 840.1 441 88.4
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 1.4e-241 839.3 440 88.9
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 1.8e-241 839.0 441 88.7
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 2.3e-241 838.6 441 88.7
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 5.2e-241 837.4 441 88.4
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 8.9e-241 836.6 441 88.2
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 2.0e-240 835.5 445 88.1
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 2.6e-240 835.1 446 88.3
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 3.4e-240 834.7 450 86.9
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 7.5e-240 833.6 441 87.3
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 9.8e-240 833.2 445 87.9
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 9.8e-240 833.2 441 88.2
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 1.7e-239 832.4 441 88.2
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 3.7e-239 831.2 442 87.6
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 3.7e-239 831.2 442 87.6
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 8.3e-239 830.1 439 87.2
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 8.3e-239 830.1 445 87.0
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 2.4e-238 828.6 442 86.9
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 1.2e-237 826.2 444 87.8
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 1.6e-237 825.9 443 87.6
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 1.6e-237 825.9 443 88.9
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 4.6e-237 824.3 455 85.9
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 1.3e-236 822.8 443 88.7
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 2.3e-236 822.0 443 88.5
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 6.6e-236 820.5 440 86.8
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 8.6e-236 820.1 442 87.1
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 8.6e-236 820.1 438 86.8
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 1.9e-235 818.9 445 86.3
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 3.3e-235 818.1 442 87.8
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 1.6e-234 815.8 443 86.2
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 2.1e-234 815.5 443 86.7
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 2.8e-234 815.1 440 85.9
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 2.8e-234 815.1 446 87.0
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 4.7e-234 814.3 443 86.0
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 4.7e-234 814.3 443 85.1
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 1.0e-233 813.1 442 86.2
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 1.0e-233 813.1 441 85.7
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 1.8e-233 812.4 449 85.1
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 3.1e-233 811.6 440 85.9
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 5.2e-233 810.8 440 85.2
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 6.8e-233 810.4 458 84.3
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 6.8e-233 810.4 457 82.9
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 8.9e-233 810.1 449 84.6
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 2.6e-232 808.5 445 86.1
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 2.6e-232 808.5 443 84.9
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 7.5e-232 807.0 438 85.2
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 1.3e-231 806.2 439 84.7
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 1.7e-231 805.8 441 84.6
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 2.2e-231 805.4 442 85.5
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 2.9e-231 805.1 442 85.3
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 3.7e-231 804.7 442 85.3
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 6.4e-231 803.9 442 85.1
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 8.3e-231 803.5 442 86.2
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 2.0e-229 798.9 446 84.1
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 2.7e-229 798.5 442 84.8
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 6.0e-229 797.3 450 83.8
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 1.3e-228 796.2 442 84.4
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 1.5e-227 792.7 442 84.2
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 4.3e-227 791.2 442 83.7
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 5.6e-227 790.8 444 83.8
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 5.6e-227 790.8 454 83.3
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 9.5e-227 790.0 442 83.5
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 2.6e-224 781.9 450 82.0
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 7.5e-224 780.4 467 81.2
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.6e-221 772.7 440 82.5
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 1.8e-217 759.2 438 83.3
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 6.8e-217 757.3 438 81.7
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 4.4e-216 754.6 462 79.0
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 5.4e-214 747.7 443 80.4
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 3.5e-213 745.0 442 80.3
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 8.9e-209 730.3 473 76.5
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 1.4e-206 723.0 445 76.0
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 6.0e-205 717.6 466 76.2
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 6.6e-204 714.1 444 76.1
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 2.5e-203 712.2 441 77.1
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 2.5e-203 712.2 439 75.4
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 5.6e-203 711.1 439 75.6
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 4.8e-194 681.4 346 89.3
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 1.3e-188 663.3 443 74.0
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 2.3e-188 662.5 460 73.0
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 5.9e-176 621.3 332 84.3
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 6.1e-173 611.3 332 83.4
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 2.3e-172 609.4 438 69.4
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 3.7e-162 575.5 440 65.9
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 4.4e-155 552.0 407 70.8
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.0e-148 530.8 304 80.6
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 1.0e-143 514.2 281 85.4
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 3.2e-142 509.2 275 85.8
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 4.2e-142 508.8 304 78.6
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 1.0e-140 504.2 410 61.2
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 4.1e-137 492.3 436 55.3
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 7.3e-126 454.9 308 71.8
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 1.7e-119 433.7 273 76.2
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 7.5e-107 391.7 211 87.7
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 1.6e-104 384.0 215 81.4
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 8.6e-103 378.3 228 78.5
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 8.6e-103 378.3 228 78.5
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 1.2e-93 347.8 200 83.0
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 2.3e-87 327.0 377 48.8
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 1.1e-81 308.1 424 44.6
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 1.2e-72 278.1 134 91.0
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 2.6e-67 260.4 388 42.5
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 2.8e-61 240.4 135 81.5
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 4.8e-61 239.6 147 76.2
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 1.4e-60 238.0 135 80.7
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 3.1e-60 236.9 147 75.5
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 6.5e-50 202.6 99 88.9
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 6.5e-50 202.6 99 88.9
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 2.0e-46 191.0 111 80.2
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 3.3e-38 163.7 97 78.4
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 2.2e-37 161.0 105 71.4
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.8e-37 160.6 125 68.0
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 5.5e-33 146.4 77 83.1
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 3.3e-30 137.1 70 87.1
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 2.2e-29 134.4 77 79.2
Ah.08g214930 Amaranthus hybridus HOM05D004186 ORTHO05D061406 7.5e-22 109.4 135 43.7
Zm00001eb265380 Zea mays HOM05D004186 ORTHO05D008381 1.7e-21 108.2 56 85.7
Zm00001eb101000 Zea mays HOM05D004186 ORTHO05D000030 2.8e-21 107.5 66 72.7
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 9.5e-17 92.4 72 66.7
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 9.5e-17 92.4 72 66.7
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 8.0e-16 89.4 73 65.8
Sc14g0005990 Simmondsia chinensis HOM05D004186 ORTHO05D039000 1.5e-14 85.1 45 82.2
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 4.5e-11 73.6 46 76.1
EL10Ac2g04384 Beta vulgaris HOM05D004186 ORTHO05D039000 1.7e-10 71.6 34 88.2
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 2.5e-09 67.8 43 74.4
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 4.3e-09 67.0 34 94.1
HanXRQChr10g0284771 Helianthus annuus HOM05D004748 ORTHO05D005825 1.2e-06 58.9 62 53.2
Lsat_1_v5_gn_0_38501 Lactuca sativa HOM05D002067 ORTHO05D002244 1.2e-06 58.9 40 62.5
arahy.Tifrunner.gnm1.ann1.E22CU6 Arachis hypogaea HOM05D001714 ORTHO05D084687 5.8e-06 56.6 39 69.2
Peaxi162Scf00075g01415 Petunia axillaris HOM05D004186 ORTHO05D306640 5.8e-06 56.6 46 67.4


User provided reference genes

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