Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 8.7e-243 843.2 421 100.0
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 3.4e-202 708.4 391 91.3
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 3.1e-200 701.8 425 81.9
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 1.8e-192 676.0 425 80.5
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 5.9e-183 644.4 422 78.2
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 6.6e-174 614.4 581 58.7
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 4.0e-171 605.1 430 74.0
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 3.5e-151 538.9 338 78.1
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.8e-131 473.4 290 79.0
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 1.1e-120 437.6 427 55.0
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 1.4e-120 437.2 430 53.0
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 5.5e-120 435.3 423 54.4
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 7.9e-119 431.4 451 51.7
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.5e-117 427.2 431 53.6
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 1.2e-114 417.5 431 52.9
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.3e-113 414.1 370 56.8
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 1.2e-111 407.5 433 50.8
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 1.6e-111 407.1 468 49.8
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 2.1e-111 406.8 421 53.9
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 4.7e-111 405.6 426 52.1
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 5.7e-109 398.7 426 50.5
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 1.7e-108 397.1 428 50.7
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 2.4e-107 393.3 425 48.9
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 3.4e-106 389.4 425 50.8
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 5.9e-106 388.7 431 48.0
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 2.5e-104 383.3 436 48.4
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.2e-103 380.9 440 48.9
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 1.2e-103 380.9 423 47.0
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 2.1e-103 380.2 424 47.4
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 2.7e-103 379.8 427 48.0
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 3.0e-102 376.3 429 47.1
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 8.8e-102 374.8 427 48.9
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 7.4e-101 371.7 426 47.7
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 9.7e-101 371.3 433 49.0
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.7e-100 370.5 423 47.3
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 1.7e-100 370.5 425 46.6
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.7e-100 369.4 425 48.5
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 3.7e-100 369.4 426 47.7
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 8.2e-100 368.2 357 54.6
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.1e-99 367.9 425 48.7
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.2e-98 364.4 431 46.6
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 2.0e-98 363.6 428 47.4
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 3.5e-98 362.8 429 47.6
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 4.5e-98 362.5 430 48.1
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 7.7e-98 361.7 431 46.4
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 1.3e-97 360.9 436 44.5
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.2e-97 360.1 423 46.8
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 5.0e-97 359.0 429 44.3
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 3.2e-96 356.3 476 42.4
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 3.2e-96 356.3 427 48.7
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 4.2e-96 355.9 428 45.8
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.2e-96 355.9 423 46.1
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 5.5e-96 355.5 428 48.4
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 7.2e-96 355.1 385 50.6
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 1.6e-95 354.0 353 51.6
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 2.7e-95 353.2 424 46.9
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 4.7e-95 352.4 428 48.1
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 6.1e-95 352.1 484 41.7
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 8.8e-94 348.2 427 47.1
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 1.2e-93 347.8 427 47.1
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 2.0e-93 347.1 427 46.8
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 2.6e-93 346.7 427 46.8
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 1.3e-92 344.4 429 46.6
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.3e-92 344.4 427 45.7
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 1.3e-92 344.4 432 45.1
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.7e-92 342.8 371 50.4
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 3.7e-92 342.8 428 47.4
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 6.3e-92 342.0 427 45.9
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.6e-90 337.4 342 52.0
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 2.0e-90 337.0 435 44.6
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 2.7e-90 336.7 433 44.3
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 7.7e-90 335.1 405 45.9
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 1.7e-89 334.0 429 45.7
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 2.2e-89 333.6 427 45.0
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 2.5e-88 330.1 434 43.5
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 1.6e-87 327.4 341 50.1
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 4.4e-85 319.3 457 40.9
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.1e-83 314.7 426 43.4
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 7.0e-83 312.0 378 44.7
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.1e-83 311.6 337 48.7
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.6e-82 310.8 336 47.9
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 7.7e-82 308.5 433 44.1
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.9e-80 303.9 429 40.8
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.2e-79 301.2 452 40.3
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 1.6e-79 300.8 318 48.4
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 4.7e-79 299.3 429 43.8
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.0e-78 298.1 413 42.4
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 5.7e-77 292.4 210 71.0
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 1.7e-76 290.8 457 38.7
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.7e-76 290.8 325 48.9
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 2.8e-76 290.0 335 48.7
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 3.1e-75 286.6 445 38.2
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 2.5e-72 276.9 325 46.8
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 3.4e-69 266.5 342 44.7
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.3e-52 211.5 170 65.3
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.9e-48 197.6 198 48.0
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 8.1e-47 192.2 467 30.6
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 7.6e-45 185.7 291 36.8
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 2.5e-40 170.6 279 36.6
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 1.3e-36 158.3 187 44.9
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 9.6e-32 142.1 220 40.5
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 9.6e-32 142.1 428 26.6
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 2.8e-23 114.0 344 29.4
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 3.7e-23 113.6 204 35.3
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 5.3e-22 109.8 199 33.7
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 9.3e-19 99.0 184 35.3
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.7e-12 78.2 138 34.1
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 5.7e-08 63.2 86 41.9
Aqoxy4G01848 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.6e-07 61.6 89 38.2
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.4e-06 58.5 138 39.1
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 1.8e-06 58.2 67 46.3


User provided reference genes

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