Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000214g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-60 234.2 113 100.0
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 5.9e-21 104.4 82 58.5
PGSC0003DMG400044753 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.3e-19 98.2 82 53.7
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 2.8e-18 95.5 78 53.8
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 6.2e-18 94.4 83 49.4
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 6.2e-18 94.4 83 49.4
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 6.2e-18 94.4 83 49.4
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 6.2e-18 94.4 83 49.4
Sopen00g003400 Solanum pennellii HOM05D000024 ORTHO05D000007 8.0e-18 94.0 82 50.0
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 8.0e-18 94.0 82 51.2
PGSC0003DMG400038794 Solanum tuberosum HOM05D000024 ORTHO05D000007 8.0e-18 94.0 86 47.7
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-17 93.2 82 50.0
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 1.4e-17 93.2 82 50.0
PGSC0003DMG400041868 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.8e-17 92.8 77 48.1
Sopen01g008290 Solanum pennellii HOM05D000047 ORTHO05D000589 2.3e-17 92.4 75 52.0
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 2.3e-17 92.4 80 48.8
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 3.1e-17 92.0 82 48.8
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 3.1e-17 92.0 105 41.9
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 4.0e-17 91.7 82 48.8
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 5.2e-17 91.3 79 49.4
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.2e-17 91.3 74 50.0
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 6.8e-17 90.9 82 48.8
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 8.9e-17 90.5 82 48.8
Nitab4.5_0002004g0030 Nicotiana tabacum HOM05D001454 ORTHO05D000007 2.6e-16 89.0 83 55.4
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-16 89.0 83 48.2
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 2.6e-16 89.0 83 48.2
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.6e-16 89.0 74 48.6
PGSC0003DMG400036258 Solanum tuberosum HOM05D012066 ORTHO05D017133 2.6e-16 89.0 71 54.9
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 3.4e-16 88.6 79 49.4
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 4.4e-16 88.2 82 48.8
PGSC0003DMG400041037 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.4e-16 88.2 101 43.6
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 5.8e-16 87.8 73 53.4
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 9.8e-16 87.0 74 50.0
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-15 86.3 79 48.1
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-15 85.1 79 48.1
Sopen03g012370 Solanum pennellii HOM05D000024 ORTHO05D000007 4.9e-15 84.7 72 51.4
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 6.4e-15 84.3 82 47.6
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 8.3e-15 84.0 73 49.3
PGSC0003DMG400044928 Solanum tuberosum HOM05D000024 ORTHO05D000007 8.3e-15 84.0 74 47.3
Peaxi162Scf00709g00322 Petunia axillaris HOM05D000024 ORTHO05D000007 1.4e-14 83.2 104 38.5
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.4e-14 82.4 74 44.6
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 9.2e-14 80.5 79 48.1
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 2.7e-13 79.0 79 44.3
Sopen07g013580 Solanum pennellii HOM05D000024 ORTHO05D000007 2.3e-12 75.9 69 53.6
Sopen02g005190 Solanum pennellii HOM05D000004 ORTHO05D000004 6.6e-12 74.3 66 48.5
Sopen11g007850 Solanum pennellii HOM05D000155 ORTHO05D000022 1.1e-11 73.6 80 40.0
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-11 72.4 70 45.7
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 4.3e-11 71.6 65 47.7
Sopen00g001110 Solanum pennellii HOM05D000003 ORTHO05D000007 7.3e-11 70.9 55 58.2
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-10 68.9 71 47.9
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-10 68.2 71 47.9
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-10 67.4 86 38.4
PGSC0003DMG400043899 Solanum tuberosum HOM05D010285 ORTHO05D011400 8.1e-10 67.4 75 44.0
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-09 66.2 84 36.9
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-09 65.9 78 41.0
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-09 65.9 71 40.8
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-09 65.5 78 41.0
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 4.0e-09 65.1 63 44.4
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-09 64.7 74 40.5
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-09 64.7 75 38.7
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 6.8e-09 64.3 62 46.8
Nitab4.5_0000498g0030 Nicotiana tabacum HOM05D001454 ORTHO05D006296 8.9e-09 63.9 91 36.3
Nitab4.5_0000527g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-08 63.5 68 42.6
Peaxi162Scf00700g00051 Petunia axillaris HOM05D000070 ORTHO05D002524 1.2e-08 63.5 76 36.8
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.5e-08 63.2 82 35.4
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-08 62.8 85 40.0
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-08 62.4 71 42.3
Nitab4.5_0014470g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-08 62.4 79 36.7
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 2.6e-08 62.4 76 39.5
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 2.6e-08 62.4 61 45.9
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-08 61.6 71 38.0
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-08 60.8 105 37.1
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.9e-08 60.5 80 41.2
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 60.1 71 42.3
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 60.1 74 39.2
CAN.G128.121 Capsicum annuum HOM05D001907 ORTHO05D015557 1.7e-07 59.7 48 56.2
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-07 59.7 74 37.8
Nitab4.5_0003260g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-07 59.3 87 37.9
Nitab4.5_0004733g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.2e-07 59.3 87 42.5
Nitab4.5_0005004g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-07 59.3 71 35.2
Sopen11g012710 Solanum pennellii HOM05D000014 ORTHO05D000016 2.2e-07 59.3 55 45.5
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-07 58.9 78 35.9
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-07 58.9 99 32.3
Nitab4.5_0008706g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.9e-07 58.9 108 38.9
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-07 58.9 75 41.3
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-07 58.5 84 35.7
Nitab4.5_0001795g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.7e-07 58.5 87 41.4
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-07 58.5 80 38.8
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-07 58.5 81 37.0
PGSC0003DMG400027601 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.7e-07 58.5 70 37.1
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-07 58.2 76 39.5
Nitab4.5_0000195g0190 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-07 58.2 80 37.5
Nitab4.5_0001492g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-07 57.8 68 42.6
Nitab4.5_0005104g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-07 57.8 72 34.7
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-07 57.8 77 36.4
Peaxi162Scf00118g00217 Petunia axillaris HOM05D000024 ORTHO05D000007 6.4e-07 57.8 85 34.1
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 6.4e-07 57.8 53 49.1
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 6.4e-07 57.8 55 45.5
Nitab4.5_0000712g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.6 78 38.5
Nitab4.5_0002045g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.6 85 38.8
Nitab4.5_0001390g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.9e-06 56.2 87 42.5
Nitab4.5_0001559g0060 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.9e-06 56.2 87 42.5
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-06 56.2 78 38.5
Nitab4.5_0002487g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-06 56.2 67 35.8
Nitab4.5_0000129g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.8 58 44.8
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.8 99 31.3
Nitab4.5_0001521g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.8 31 77.4
Nitab4.5_0003188g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.8 81 37.0
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-06 55.5 85 36.5
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-06 55.5 97 29.9
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-06 55.5 77 37.7
Nitab4.5_0006639g0110 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.2e-06 55.5 87 41.4
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-06 55.1 71 39.4
SHI23635 Sapria himalayana HOM05D000024 ORTHO05D000007 4.1e-06 55.1 95 34.7
Nitab4.5_0000902g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-06 54.7 63 39.7
PGSC0003DMG400038477 Solanum tuberosum HOM05D008966 ORTHO05D011465 5.4e-06 54.7 42 52.4
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.1e-06 54.3 72 38.9
Nitab4.5_0000357g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.1e-06 54.3 75 38.7
Nitab4.5_0000698g0080 Nicotiana tabacum HOM05D000801 ORTHO05D000007 7.1e-06 54.3 81 42.0
Nitab4.5_0004569g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 7.1e-06 54.3 87 40.2
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 54.3 53 45.3
PGSC0003DMG400013852 Solanum tuberosum HOM05D000024 ORTHO05D000007 7.1e-06 54.3 70 32.9
Nitab4.5_0000033g0390 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-06 53.9 72 40.3
Nitab4.5_0001240g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 9.2e-06 53.9 87 41.4
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-06 53.9 77 36.4
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-06 53.9 78 38.5


User provided reference genes

Program Settings