Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000212g0090 Nicotiana tabacum HOM05D004214 ORTHO05D004963 1.8e-116 422.5 207 100.0
Nitab4.5_0010283g0010 Nicotiana tabacum HOM05D004214 ORTHO05D004963 1.6e-109 399.4 236 86.0
Peaxi162Scf00629g00121 Petunia axillaris HOM05D004214 ORTHO05D004963 1.9e-81 306.2 215 76.3
PGSC0003DMG400025136 Solanum tuberosum HOM05D004214 ORTHO05D004963 5.3e-76 288.1 252 63.9
Sopen02g016310 Solanum pennellii HOM05D004214 ORTHO05D004963 3.9e-71 271.9 253 61.7
Solyc02g067120.4 Solanum lycopersicum HOM05D004214 ORTHO05D004963 3.3e-70 268.9 248 61.3
Oeu010226.1 Olea europaea HOM05D004214 ORTHO05D004963 1.5e-65 253.4 231 60.2
Oeu010227.1 Olea europaea HOM05D004214 ORTHO05D004963 1.5e-65 253.4 231 60.2
Dinv11505 Davidia involucrata HOM05D004214 ORTHO05D004963 1.2e-64 250.4 250 54.4
CAN.G979.5 Capsicum annuum HOM05D004214 ORTHO05D004963 1.4e-63 246.9 222 62.2
Migut.H00677 Erythranthe guttata HOM05D004214 ORTHO05D004963 1.8e-63 246.5 204 62.7
GSVIVG01011460001 Vitis vinifera HOM05D004214 ORTHO05D004963 8.2e-61 237.7 255 52.2
MSTRG.23916 Avicennia marina HOM05D004214 ORTHO05D004963 7.0e-60 234.6 253 52.6
Hma1.2p1_0409F.1_g146710 Hydrangea macrophylla HOM05D004214 ORTHO05D004963 1.7e-58 229.9 264 50.0
Cc07_g03630 Coffea canephora HOM05D004214 ORTHO05D004963 2.2e-58 229.6 220 56.8
CSS0015906 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 5.0e-58 228.4 204 57.4
CSS0019671 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 5.0e-58 228.4 204 57.4
Potri.017G087500 Populus trichocarpa HOM05D004214 ORTHO05D004963 4.2e-57 225.3 209 54.5
TWI60G1366 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 9.4e-57 224.2 248 49.2
Cpa.g.sc14.113 Carica papaya HOM05D004214 ORTHO05D004963 8.0e-56 221.1 216 54.6
Eucgr.I02016 Eucalyptus grandis HOM05D004214 ORTHO05D004963 8.0e-56 221.1 195 60.0
Actinidia06102 Actinidia chinensis HOM05D004214 ORTHO05D004963 1.4e-55 220.3 228 53.1
SalBow1G5883 Salvia bowleyana HOM05D004214 ORTHO05D004963 3.0e-55 219.2 211 55.9
Atru.chr8.322 Acer truncatum HOM05D004214 ORTHO05D004963 5.7e-54 214.9 218 53.7
EL10Ac2g03019 Beta vulgaris HOM05D004214 ORTHO05D004963 1.7e-53 213.4 251 49.4
Sc10g0003430 Simmondsia chinensis HOM05D004214 ORTHO05D004963 2.2e-53 213.0 214 52.8
TWI34G0797 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 7.0e-52 208.0 248 47.2
TWI34G1333 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 7.0e-52 208.0 248 47.2
Rhsim10G0035900 Rhododendron simsii HOM05D004214 ORTHO05D004963 9.1e-52 207.6 261 44.8
HanXRQChr15g0487741 Helianthus annuus HOM05D004214 ORTHO05D004963 1.2e-51 207.2 202 53.5
Ciclev10012515m.g Citrus clementina HOM05D004214 ORTHO05D004963 1.6e-51 206.8 212 52.4
Sp7g02430 Schrenkiella parvula HOM05D004214 ORTHO05D004963 3.5e-51 205.7 195 52.8
Thhalv10027904m.g Eutrema salsugineum HOM05D004214 ORTHO05D004963 4.5e-51 205.3 195 53.3
TAR629G3302 Trochodendron aralioides HOM05D004214 ORTHO05D004963 7.7e-51 204.5 150 67.3
Carub.0007s3642 Capsella rubella HOM05D004214 ORTHO05D004963 2.3e-50 203.0 195 52.3
Lj8A428G27 Lonicera japonica HOM05D004214 ORTHO05D004963 2.9e-50 202.6 165 60.6
A04p12290 Brassica napus HOM05D004214 ORTHO05D004963 3.8e-50 202.2 213 49.8
Duzib147G0992 Durio zibethinus HOM05D004214 ORTHO05D004963 5.0e-50 201.8 249 46.2
BcaB06g27341 Brassica carinata HOM05D004214 ORTHO05D004963 8.6e-50 201.1 213 50.2
BraA04t16893Z Brassica rapa HOM05D004214 ORTHO05D004963 1.1e-49 200.7 213 49.3
Lj3A367T10 Lonicera japonica HOM05D004214 ORTHO05D004963 1.1e-49 200.7 172 58.1
Rhsim10G0035800 Rhododendron simsii HOM05D004214 ORTHO05D004963 1.9e-49 199.9 201 53.7
C04p45970 Brassica napus HOM05D004214 ORTHO05D004963 2.5e-49 199.5 213 49.3
BolC4t26180H Brassica oleracea HOM05D004214 ORTHO05D004963 2.5e-49 199.5 213 49.3
Gorai.001G240700 Gossypium raimondii HOM05D004214 ORTHO05D004963 4.2e-49 198.7 192 52.1
ECA232G2753 Erigeron canadensis HOM05D004214 ORTHO05D005214 9.5e-49 197.6 228 48.7
Manes.02G048700 Manihot esculenta HOM05D004214 ORTHO05D004963 1.6e-48 196.8 223 50.7
AUR62018111 Chenopodium quinoa HOM05D004214 ORTHO05D004963 2.1e-48 196.4 229 48.9
THA.LOC104805483 Tarenaya hassleriana HOM05D004214 ORTHO05D004963 2.8e-48 196.1 192 52.6
CSS0036969 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 6.1e-48 194.9 174 58.0
CARHR262760 Cardamine hirsuta HOM05D004214 ORTHO05D004963 3.0e-47 192.6 145 62.1
AL7G50770 Arabidopsis lyrata HOM05D004214 ORTHO05D004963 1.2e-46 190.7 154 59.1
DCAR_011079 Daucus carota HOM05D004214 ORTHO05D004963 3.4e-46 189.1 209 50.7
Lsat_1_v5_gn_4_169740 Lactuca sativa HOM05D004214 ORTHO05D004963 3.4e-46 189.1 154 59.7
CARHR262800 Cardamine hirsuta HOM05D004214 ORTHO05D004963 4.4e-46 188.7 145 61.4
SGA_v2.0_scaffold413G51175 Striga asiatica HOM05D004214 ORTHO05D004963 5.7e-46 188.3 193 52.3
COL.COLO4_12225 Corchorus olitorius HOM05D004214 ORTHO05D004963 1.3e-45 187.2 150 58.7
Sp7g02440 Schrenkiella parvula HOM05D004214 ORTHO05D004963 1.7e-45 186.8 213 46.9
Lj3A346G23 Lonicera japonica HOM05D004214 ORTHO05D004963 8.3e-45 184.5 193 50.8
Lj3A369T15 Lonicera japonica HOM05D004214 ORTHO05D004963 1.4e-44 183.7 146 60.3
Thhalv10028063m.g Eutrema salsugineum HOM05D004214 ORTHO05D004963 1.8e-44 183.3 214 47.2
BraA04t16892Z Brassica rapa HOM05D004214 ORTHO05D004963 2.4e-44 183.0 195 47.2
BcaB06g27320 Brassica carinata HOM05D004214 ORTHO05D004963 4.1e-44 182.2 195 47.2
C04p45960 Brassica napus HOM05D004214 ORTHO05D004963 5.4e-44 181.8 195 47.2
BolC4t26179H Brassica oleracea HOM05D004214 ORTHO05D004963 5.4e-44 181.8 195 47.2
Lj8A426T27 Lonicera japonica HOM05D004214 ORTHO05D004963 2.0e-43 179.9 146 59.6
unitig_62.g23442 Utricularia gibba HOM05D004214 ORTHO05D004963 2.0e-43 179.9 150 57.3
BcaB06g27340 Brassica carinata HOM05D004214 ORTHO05D004963 3.5e-43 179.1 190 47.4
Hund15587 Selenicereus undatus HOM05D004214 ORTHO05D004963 3.5e-43 179.1 150 60.0
A04p12280 Brassica napus HOM05D004214 ORTHO05D004963 4.5e-43 178.7 195 46.7
Gohir.D07G212700 Gossypium hirsutum HOM05D004214 ORTHO05D004963 4.5e-43 178.7 144 57.6
Thecc.04G087300 Theobroma cacao HOM05D004214 ORTHO05D004963 1.0e-42 177.6 150 56.0
AL7G50790 Arabidopsis lyrata HOM05D004214 ORTHO05D004963 1.7e-42 176.8 211 45.0
AUR62034445 Chenopodium quinoa HOM05D004214 ORTHO05D004963 5.0e-42 175.3 172 52.9
A04p12270 Brassica napus HOM05D004214 ORTHO05D004963 1.5e-41 173.7 195 45.1
BraA04t16891Z Brassica rapa HOM05D004214 ORTHO05D004963 1.5e-41 173.7 195 45.1
QL02p084825 Quercus lobata HOM05D004214 ORTHO05D004963 1.5e-41 173.7 219 42.9
Lj4P113T24 Lonicera japonica HOM05D004214 ORTHO05D004963 1.9e-41 173.3 140 60.0
Carub.0007s3643 Capsella rubella HOM05D004214 ORTHO05D004963 2.5e-41 172.9 216 43.5
AT5G39520 Arabidopsis thaliana HOM05D004214 ORTHO05D004963 5.6e-41 171.8 221 42.1
PSO478G0939 Papaver somniferum HOM05D004214 ORTHO05D004963 9.5e-41 171.0 262 38.9
PSO017G4463 Papaver somniferum HOM05D004214 ORTHO05D004963 1.6e-40 170.2 262 39.3
Nn4g23269 Nelumbo nucifera HOM05D004214 ORTHO05D004963 3.6e-40 169.1 157 55.4
CARHR262810 Cardamine hirsuta HOM05D004214 ORTHO05D004963 6.1e-40 168.3 211 44.1
AT5G39530 Arabidopsis thaliana HOM05D004214 ORTHO05D004963 8.0e-40 167.9 117 64.1
Lj3A352G14 Lonicera japonica HOM05D004214 ORTHO05D004963 1.0e-39 167.5 140 57.9
PGR004G0346 Punica granatum HOM05D004214 ORTHO05D004963 5.8e-38 161.8 135 58.5
QL02p084872 Quercus lobata HOM05D004214 ORTHO05D004963 7.0e-36 154.8 190 42.1
ATR0564G445 Amborella trichopoda HOM05D004214 ORTHO05D004963 9.2e-36 154.5 153 49.7
Nitab4.5_0000568g0170 Nicotiana tabacum HOM05D004214 ORTHO05D004963 1.2e-35 154.1 220 40.0
CDE02G0918 Ceratophyllum demersum HOM05D004214 ORTHO05D004963 2.7e-35 152.9 146 51.4
CAN.G206.176 Capsicum annuum HOM05D004214 ORTHO05D004963 1.7e-34 150.2 197 42.1
PGSC0003DMG401001341 Solanum tuberosum HOM05D004214 ORTHO05D004963 3.0e-34 149.4 148 50.0
Solyc02g088270.3 Solanum lycopersicum HOM05D004214 ORTHO05D004963 5.0e-34 148.7 144 50.7
SEGI_32476 Sequoiadendron giganteum HOM05D004214 ORTHO05D004963 1.5e-33 147.1 146 52.1
Sopen02g032950 Solanum pennellii HOM05D004214 ORTHO05D004963 5.6e-33 145.2 144 50.0
PGSC0003DMG402001341 Solanum tuberosum HOM05D004214 ORTHO05D004963 1.1e-31 141.0 148 48.6
Lj2g0016815 Lotus japonicus HOM05D004214 ORTHO05D004963 3.1e-31 139.4 195 40.0
Phvul.004G031400 Phaseolus vulgaris HOM05D004214 ORTHO05D004963 3.1e-31 139.4 197 39.6
Glyma.13G060852 Glycine max HOM05D004214 ORTHO05D004963 2.0e-30 136.7 196 39.8
Ca_04853_v3 Cicer arietinum L. HOM05D004214 ORTHO05D004963 7.5e-30 134.8 190 38.4
QL02p084854 Quercus lobata HOM05D004214 ORTHO05D004963 2.9e-29 132.9 113 50.4
TPR.G14395 Trifolium pratense HOM05D004214 ORTHO05D004963 6.4e-29 131.7 147 45.6
arahy.Tifrunner.gnm1.ann1.55PBKN Arachis hypogaea HOM05D004214 ORTHO05D004963 8.3e-29 131.3 147 44.9
arahy.Tifrunner.gnm1.ann1.7SZ544 Arachis hypogaea HOM05D004214 ORTHO05D004963 2.4e-28 129.8 146 45.2
VMungo0464G0566 Vigna mungo HOM05D004214 ORTHO05D004963 3.2e-28 129.4 198 37.4
TPR.G26214 Trifolium pratense HOM05D004214 ORTHO05D004963 5.4e-28 128.6 197 36.5
FAN14G4990 Fragaria x ananassa HOM05D004214 ORTHO05D004963 3.5e-27 125.9 140 44.3
Medtr6g012830 Medicago truncatula HOM05D004214 ORTHO05D004963 3.5e-27 125.9 195 35.9
Lalb_Chr06g0175181 Lupinus albus HOM05D004214 ORTHO05D004963 7.8e-27 124.8 197 36.5
Glyma.19G025600 Glycine max HOM05D004214 ORTHO05D004963 1.0e-26 124.4 191 37.7
MD09G1055000 Malus domestica HOM05D004214 ORTHO05D004963 1.0e-26 124.4 149 40.3
Lj2g0002943 Lotus japonicus HOM05D004214 ORTHO05D004963 1.3e-26 124.0 197 36.5
FvH4_6g48001 Fragaria vesca HOM05D004214 ORTHO05D004963 3.0e-26 122.9 205 36.1
Prupe.3G263500 Prunus persica HOM05D004214 ORTHO05D004963 3.0e-26 122.9 148 43.2
FAN14G3700 Fragaria x ananassa HOM05D004214 ORTHO05D004963 3.9e-26 122.5 204 36.3
MD09G1055400 Malus domestica HOM05D004214 ORTHO05D004963 6.6e-26 121.7 186 36.6
FAN05G5298 Fragaria x ananassa HOM05D004214 ORTHO05D004963 1.1e-25 120.9 208 37.0
RcHm_v2.0_Chr2g0167291 Rosa chinensis HOM05D004214 ORTHO05D004963 7.3e-25 118.2 158 39.2
PGR083G1063 Punica granatum HOM05D004214 ORTHO05D004963 9.5e-25 117.9 147 38.8
Psat1g070480 Pisum sativum HOM05D004214 ORTHO05D004963 2.1e-24 116.7 160 37.5
FvH4_6g48000 Fragaria vesca HOM05D004214 ORTHO05D004963 2.8e-24 116.3 140 42.9
BcaB06g27319 Brassica carinata HOM05D004214 ORTHO05D004963 4.7e-24 115.5 192 37.5
RcHm_v2.0_Chr2g0167251 Rosa chinensis HOM05D004214 ORTHO05D004963 6.2e-24 115.2 131 38.9
Mapoly0033s0115 Marchantia polymorpha HOM05D004214 ORTHO05D004963 8.1e-24 114.8 146 39.0
Os03g0168300 Oryza sativa ssp. japonica HOM05D004214 ORTHO05D004963 1.4e-23 114.0 151 41.1
Zm00001eb402430 Zea mays HOM05D004214 ORTHO05D004963 1.8e-23 113.6 203 33.5
Peaxi162Scf00166g01050 Petunia axillaris HOM05D004214 ORTHO05D004963 2.3e-23 113.2 213 34.3
ClCG09G017980 Citrullus lanatus HOM05D004214 ORTHO05D004963 6.8e-23 111.7 146 35.6
FAN09G1794 Fragaria x ananassa HOM05D004214 ORTHO05D004963 1.2e-22 110.9 209 35.4
CsaV3_5G038250 Cucumis sativus L. HOM05D004214 ORTHO05D004963 1.5e-22 110.5 222 32.9
Lj2g0001860 Lotus japonicus HOM05D004214 ORTHO05D004963 5.8e-22 108.6 139 40.3
Lj3A350G16 Lonicera japonica HOM05D004214 ORTHO05D004963 9.9e-22 107.8 160 40.0
RcHm_v2.0_Chr2g0167241 Rosa chinensis HOM05D004214 ORTHO05D004963 1.3e-21 107.5 135 41.5
FAN02G2928 Fragaria x ananassa HOM05D004214 ORTHO05D004963 2.2e-21 106.7 130 43.8
Zm00001eb328430 Zea mays HOM05D004214 ORTHO05D004963 3.7e-21 105.9 170 38.2
Phvul.004G029700 Phaseolus vulgaris HOM05D004214 ORTHO05D004963 4.9e-21 105.5 196 35.2
Gohir.A07G206700 Gossypium hirsutum HOM05D004214 ORTHO05D004963 8.3e-21 104.8 99 50.5
C04p45950 Brassica napus HOM05D004214 ORTHO05D004963 1.9e-20 103.6 163 37.4
Lj2g0019349 Lotus japonicus HOM05D004214 ORTHO05D004963 4.1e-20 102.4 144 37.5
TPR.G8805 Trifolium pratense HOM05D004214 ORTHO05D004963 3.5e-19 99.4 151 37.1
Os07g0633000 Oryza sativa ssp. japonica HOM05D004214 ORTHO05D004963 6.0e-19 98.6 171 38.0
MELO3C033594.2 Cucumis melo HOM05D004214 ORTHO05D004963 1.0e-18 97.8 218 27.5
C06p18570 Brassica napus HOM05D004214 ORTHO05D004963 3.0e-18 96.3 72 61.1
Psat1g071840 Pisum sativum HOM05D004214 ORTHO05D004963 5.6e-17 92.0 151 32.5
Nitab4.5_0001591g0160 Nicotiana tabacum HOM05D004214 ORTHO05D004963 9.5e-17 91.3 200 32.0
BraA07t29702Z Brassica rapa HOM05D004214 ORTHO05D004963 1.1e-15 87.8 62 66.1
Ca_04848_v3 Cicer arietinum L. HOM05D004214 ORTHO05D004963 1.4e-15 87.4 152 31.6
ClCG10G015310 Citrullus lanatus HOM05D004214 ORTHO05D004963 6.8e-15 85.1 152 32.9
Lj3A364T22 Lonicera japonica HOM05D004214 ORTHO05D004963 9.2e-12 74.7 79 46.8
Gohir.D11G074550 Gossypium hirsutum HOM05D004214 ORTHO05D004963 3.5e-11 72.8 128 32.0
Gorai.007G080000 Gossypium raimondii HOM05D004214 ORTHO05D004963 4.6e-11 72.4 128 32.0
BolC6t37070H Brassica oleracea HOM05D004214 ORTHO05D004963 6.0e-11 72.0 54 59.3
CBR_g51334 Chara braunii HOM05D004214 ORTHO05D004963 1.3e-10 70.9 127 33.9
arahy.Tifrunner.gnm1.ann1.SU00NT Arachis hypogaea HOM05D004214 ORTHO05D004963 1.2e-08 64.3 196 25.5
Glyma.13G061800 Glycine max HOM05D004214 ORTHO05D004963 3.6e-08 62.8 133 27.8
PRCOL_00004285 Prasinoderma coloniale HOM05D004214 ORTHO05D004963 3.6e-08 62.8 145 29.7
BolC4t26178H Brassica oleracea HOM05D004214 ORTHO05D004963 8.1e-08 61.6 78 42.3
CBR_g46605 Chara braunii HOM05D004214 ORTHO05D004963 1.8e-07 60.5 121 32.2


User provided reference genes

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