Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.8e-167 592.4 286 100.0
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 7.3e-116 421.0 260 78.5
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 4.3e-108 395.2 260 76.2
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 2.8e-107 392.5 260 75.8
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 8.1e-107 391.0 260 75.4
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 2.0e-105 386.3 261 70.9
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.6e-105 386.0 260 74.2
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 4.9e-104 381.7 264 70.5
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 2.1e-102 376.3 262 68.3
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 6.0e-102 374.8 265 68.3
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 1.0e-101 374.0 262 68.3
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 1.7e-101 373.2 260 68.5
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 3.0e-101 372.5 262 67.9
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 1.1e-100 370.5 256 73.0
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.5e-100 370.2 262 67.9
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 3.3e-100 369.0 262 67.6
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 1.6e-99 366.7 291 63.9
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 2.8e-99 365.9 262 67.2
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 2.3e-98 362.8 262 66.4
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 6.8e-98 361.3 267 66.3
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 2.0e-97 359.8 274 64.2
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 2.9e-96 355.9 269 64.3
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 1.4e-95 353.6 262 63.7
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 3.2e-95 352.4 262 66.0
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 4.1e-95 352.1 279 60.9
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 4.1e-95 352.1 262 65.3
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 5.4e-95 351.7 269 63.9
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 7.1e-95 351.3 262 65.6
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 2.1e-94 349.7 269 65.1
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 2.7e-94 349.4 262 65.3
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 6.0e-94 348.2 262 65.3
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 5.1e-93 345.1 262 65.3
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 1.1e-92 344.0 290 60.0
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 2.5e-92 342.8 260 65.0
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 2.5e-92 342.8 262 63.4
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 2.5e-92 342.8 262 64.9
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 2.5e-92 342.8 269 61.0
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 4.3e-92 342.0 271 62.7
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 5.6e-92 341.7 282 62.1
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 7.3e-92 341.3 280 61.1
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 9.6e-92 340.9 269 60.6
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 1.2e-91 340.5 260 65.4
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 1.6e-91 340.1 262 62.6
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 2.8e-91 339.3 276 62.7
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 1.4e-90 337.0 248 66.9
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 1.8e-90 336.7 269 61.7
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 4.0e-90 335.5 269 61.7
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.2e-89 334.0 283 60.4
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 2.6e-89 332.8 269 61.7
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 9.9e-89 330.9 269 61.3
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 3.8e-88 328.9 275 60.7
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 6.4e-88 328.2 260 63.1
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 6.4e-88 328.2 337 53.1
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 1.1e-87 327.4 271 60.1
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 1.4e-87 327.0 262 61.8
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 3.2e-87 325.9 264 59.1
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 3.2e-87 325.9 264 59.1
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 4.2e-87 325.5 261 61.3
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 9.3e-87 324.3 264 59.1
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 2.7e-86 322.8 262 59.2
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 3.5e-86 322.4 262 62.2
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 6.0e-86 321.6 264 59.1
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 1.3e-85 320.5 264 58.7
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.7e-85 320.1 356 50.0
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 8.7e-85 317.8 262 59.9
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 1.1e-84 317.4 258 60.5
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 1.1e-84 317.4 262 59.9
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 2.5e-84 316.2 263 59.7
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 1.6e-83 313.5 315 50.2
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 3.6e-83 312.4 265 58.1
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 4.8e-83 312.0 269 58.0
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 1.4e-82 310.5 261 60.9
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 1.8e-82 310.1 262 59.5
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 3.1e-82 309.3 264 56.8
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 9.9e-81 304.3 264 58.0
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 1.3e-80 303.9 261 54.4
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 1.7e-80 303.5 264 57.6
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 2.2e-80 303.1 264 58.0
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 4.9e-80 302.0 264 57.2
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 2.7e-78 296.2 261 52.9
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 1.0e-77 294.3 264 55.7
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 2.3e-77 293.1 262 56.1
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 3.0e-77 292.7 261 52.1
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.0e-73 280.0 275 56.0
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 7.9e-70 268.1 293 49.8
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 1.3e-67 260.8 264 54.9
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 1.0e-64 251.1 281 45.6
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 2.9e-64 249.6 265 49.1
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 1.4e-63 247.3 263 51.7
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 2.1e-59 233.4 296 45.3
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 6.3e-59 231.9 252 44.4
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 6.3e-59 231.9 252 44.4
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 3.4e-57 226.1 274 43.1
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 3.7e-51 206.1 150 67.3
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.6e-49 199.9 161 62.1
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 1.7e-48 197.2 133 68.4
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 3.8e-48 196.1 111 83.8
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 1.6e-46 190.7 148 64.2
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 7.4e-44 181.8 98 81.6
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 9.7e-44 181.4 134 63.4
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 2.2e-43 180.3 134 61.2
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 2.6e-41 173.3 146 58.2
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 2.6e-41 173.3 101 77.2
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 1.4e-39 167.5 194 49.5
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 1.2e-38 164.5 270 40.7
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 2.3e-37 160.2 251 38.2
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 6.7e-37 158.7 87 79.3
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 2.6e-36 156.8 87 79.3
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 9.7e-36 154.8 88 76.1
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 1.2e-33 147.9 259 39.8
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 2.9e-32 143.3 143 46.9
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 1.8e-29 134.0 74 78.4
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 6.7e-29 132.1 77 72.7
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 5.9e-25 119.0 222 29.7
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 7.7e-25 118.6 74 70.3
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.9e-23 114.0 82 59.8
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 1.5e-20 104.4 58 79.3
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 9.8e-20 101.7 62 71.0
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 1.6e-09 67.8 115 38.3
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 1.2e-06 58.2 33 81.8
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 1.6e-06 57.8 36 72.2
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 6.1e-06 55.8 41 65.9


User provided reference genes

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