Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 4.8e-91 337.8 169 100.0
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 2.5e-87 325.5 167 96.4
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 5.5e-79 297.7 168 88.7
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 7.2e-79 297.4 168 88.1
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 2.2e-75 285.8 168 84.5
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 2.2e-75 285.8 168 84.5
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 1.5e-60 236.5 163 73.6
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 9.7e-52 207.2 185 63.2
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 3.7e-51 205.3 168 63.1
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 1.4e-50 203.4 168 62.5
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 1.8e-50 203.0 166 60.8
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 1.6e-49 199.9 169 62.7
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 3.5e-49 198.7 165 61.2
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 1.7e-48 196.4 168 60.7
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 2.2e-48 196.1 168 59.5
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 2.9e-48 195.7 166 59.6
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 5.0e-48 194.9 165 60.0
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 5.0e-48 194.9 169 59.8
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 8.5e-48 194.1 164 59.1
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 1.1e-47 193.7 168 58.9
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 1.5e-47 193.4 165 58.8
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 5.5e-47 191.4 166 60.2
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 7.2e-47 191.0 163 57.7
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 1.0e-45 187.2 144 66.7
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 1.0e-45 187.2 144 66.7
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 5.2e-45 184.9 161 57.8
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 8.8e-45 184.1 156 61.5
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 2.0e-44 183.0 165 56.4
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 7.5e-44 181.0 165 55.2
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 3.7e-43 178.7 165 53.9
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 6.3e-43 177.9 164 53.7
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 2.4e-42 176.0 162 56.2
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 2.7e-41 172.6 165 53.3
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 5.9e-41 171.4 164 56.7
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 7.7e-41 171.0 133 65.4
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 1.3e-40 170.2 165 53.3
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 2.3e-40 169.5 140 62.1
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 2.9e-40 169.1 170 52.9
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 6.6e-40 167.9 169 52.7
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 8.6e-40 167.5 166 53.6
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 1.5e-39 166.8 166 52.4
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 1.9e-39 166.4 163 55.2
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 1.9e-39 166.4 159 53.5
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 1.9e-39 166.4 168 51.2
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 2.5e-39 166.0 166 53.6
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 2.5e-39 166.0 166 52.4
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 2.5e-39 166.0 166 52.4
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 2.5e-39 166.0 165 51.5
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 2.5e-39 166.0 168 52.4
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 3.3e-39 165.6 130 66.2
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 4.2e-39 165.2 166 52.4
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 9.5e-39 164.1 164 50.0
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 9.5e-39 164.1 162 53.7
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 1.2e-38 163.7 164 51.2
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 1.2e-38 163.7 164 51.2
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 1.2e-38 163.7 162 51.9
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 1.6e-38 163.3 168 51.8
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 2.8e-38 162.5 162 50.0
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 1.0e-37 160.6 166 50.6
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 1.0e-37 160.6 163 52.1
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 1.8e-37 159.8 164 48.8
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 2.3e-37 159.5 164 48.8
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 3.0e-37 159.1 162 49.4
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 4.0e-37 158.7 168 48.8
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 6.8e-37 157.9 163 52.1
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 1.2e-36 157.1 165 50.9
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 1.5e-36 156.8 165 49.7
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 1.5e-36 156.8 168 49.4
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 2.0e-36 156.4 165 49.1
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 2.0e-36 156.4 168 49.4
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 2.6e-36 156.0 178 46.1
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 7.5e-36 154.5 163 49.7
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 1.1e-34 150.6 166 49.4
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 1.4e-34 150.2 142 51.4
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 1.4e-34 150.2 149 50.3
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 1.8e-34 149.8 167 47.9
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 4.1e-34 148.7 162 46.9
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 2.0e-33 146.4 150 52.7
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 3.5e-33 145.6 130 58.5
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 5.9e-33 144.8 137 54.7
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 1.0e-32 144.1 137 56.9
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 1.0e-32 144.1 163 46.0
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 1.5e-31 140.2 162 47.5
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 9.5e-31 137.5 119 60.5
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 2.8e-30 136.0 137 49.6
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 2.3e-29 132.9 108 60.2
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 3.1e-29 132.5 108 59.3
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 1.5e-28 130.2 137 49.6
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 5.8e-28 128.3 148 49.3
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 5.8e-28 128.3 132 52.3
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 1.3e-27 127.1 116 56.9
CAN.G772.6 Capsicum annuum HOM05D005833 ORTHO05D008135 1.7e-27 126.7 78 79.5
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 9.2e-26 120.9 108 57.4
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 1.7e-24 116.7 127 46.5
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 3.9e-24 115.5 118 48.3
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 7.3e-23 111.3 110 51.8
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 9.5e-23 110.9 140 46.4
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 6.6e-16 88.2 75 61.3
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 3.1e-13 79.3 123 40.7
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 8.9e-13 77.8 53 69.8
BcaC09g51225 Brassica carinata HOM05D005833 ORTHO05D008135 2.9e-11 72.8 65 52.3


User provided reference genes

Program Settings