Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.8e-87 324.7 154 100.0
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 2.8e-66 255.4 154 82.5
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.0e-63 246.9 154 79.9
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 5.6e-54 214.5 117 86.3
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 2.1e-40 169.5 130 60.0
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 2.7e-40 169.1 130 64.6
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 5.1e-39 164.9 142 59.9
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 1.1e-38 163.7 130 59.2
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.1e-38 163.7 143 55.9
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 1.1e-38 163.7 127 59.1
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 3.3e-38 162.2 131 59.5
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 5.6e-38 161.4 131 61.1
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 1.6e-37 159.8 141 56.0
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 1.6e-37 159.8 130 58.5
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 3.6e-37 158.7 131 58.0
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.1e-36 157.1 130 56.9
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 2.0e-35 152.9 141 53.2
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 2.6e-35 152.5 133 57.9
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.6e-35 152.5 133 57.9
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.6e-35 152.5 133 57.9
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 4.4e-35 151.8 130 55.4
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 4.4e-35 151.8 123 57.7
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 5.8e-35 151.4 130 56.9
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 9.9e-35 150.6 127 53.5
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.7e-34 149.8 131 53.4
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 1.7e-34 149.8 131 53.4
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 2.2e-34 149.4 131 56.5
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 2.9e-34 149.1 131 55.0
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 2.9e-34 149.1 148 50.0
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 3.7e-34 148.7 130 53.8
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 3.7e-34 148.7 130 54.6
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 6.4e-34 147.9 130 53.1
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 1.1e-33 147.1 126 57.1
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 1.4e-33 146.7 132 53.0
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 4.1e-33 145.2 130 51.5
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 5.4e-33 144.8 132 53.8
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 1.6e-32 143.3 132 53.8
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 6.0e-32 141.4 133 52.6
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 7.8e-32 141.0 130 55.4
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 7.8e-32 141.0 130 55.4
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 2.3e-31 139.4 130 54.6
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 5.1e-31 138.3 121 51.2
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 5.1e-31 138.3 130 53.8
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 8.6e-31 137.5 130 51.5
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 8.6e-31 137.5 166 44.6
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 8.6e-31 137.5 166 44.6
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 1.1e-30 137.1 154 48.1
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 1.5e-30 136.7 132 51.5
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 1.9e-30 136.3 130 53.1
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 2.5e-30 136.0 131 52.7
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 2.5e-30 136.0 132 50.8
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.3e-30 135.6 123 55.3
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 5.6e-30 134.8 136 48.5
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 7.3e-30 134.4 130 53.8
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 2.1e-29 132.9 130 50.0
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 2.8e-29 132.5 130 49.2
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 3.6e-29 132.1 130 52.3
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 3.6e-29 132.1 149 45.6
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 6.2e-29 131.3 130 49.2
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.4e-28 130.2 131 51.1
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 1.4e-28 130.2 131 51.1
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 1.4e-28 130.2 130 49.2
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 2.4e-28 129.4 131 49.6
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 2.4e-28 129.4 130 50.0
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 3.1e-28 129.0 149 45.0
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 3.1e-28 129.0 149 45.0
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 3.1e-28 129.0 130 49.2
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 4.0e-28 128.6 149 45.0
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 5.2e-28 128.3 130 50.8
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 1.5e-27 126.7 130 50.0
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.5e-27 126.7 130 46.9
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 3.4e-27 125.6 130 49.2
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 3.4e-27 125.6 130 49.2
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 3.4e-27 125.6 125 49.6
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 5.8e-27 124.8 130 48.5
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 7.6e-27 124.4 149 44.3
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 7.6e-27 124.4 131 51.1
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 7.6e-27 124.4 133 48.1
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 2.9e-26 122.5 131 48.9
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 6.4e-26 121.3 130 45.4
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 1.1e-25 120.6 130 46.2
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 1.1e-25 120.6 75 81.3
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.4e-25 120.2 130 46.9
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.4e-25 120.2 130 48.5
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 2.1e-24 116.3 133 46.6
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 4.6e-24 115.2 130 48.5
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 3.0e-23 112.5 144 45.8
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 6.6e-23 111.3 121 44.6
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 5.6e-22 108.2 131 47.3
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 9.6e-22 107.5 131 45.0
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 1.1e-20 104.0 77 59.7
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 2.9e-18 95.9 88 55.7
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.9e-18 95.9 108 50.0
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 2.4e-17 92.8 80 52.5
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 3.5e-16 89.0 167 31.7
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 3.9e-15 85.5 70 51.4
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 3.9e-15 85.5 41 82.9
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 1.8e-12 76.6 132 35.6
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 1.3e-10 70.5 150 32.0
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 7.1e-09 64.7 71 45.1
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 1.8e-07 60.1 41 56.1
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 6.7e-07 58.2 31 71.0


User provided reference genes

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