Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.1e-62 240.0 113 100.0
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 3.8e-52 208.0 124 82.3
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 3.8e-52 208.0 124 82.3
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 3.8e-52 208.0 124 82.3
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 3.8e-52 208.0 124 82.3
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.4e-51 203.4 124 80.6
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 4.7e-50 201.1 124 79.8
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 4.8e-47 191.0 127 75.6
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.8e-46 189.1 126 75.4
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.8e-46 189.1 127 74.0
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.8e-46 189.1 127 74.0
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.8e-46 189.1 124 75.8
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 1.2e-45 186.4 130 73.8
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 1.3e-44 183.0 127 73.2
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.7e-44 182.6 127 72.4
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 1.7e-44 182.6 127 72.4
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 1.7e-44 182.6 127 72.4
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 1.7e-44 182.6 127 72.4
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 1.1e-43 179.9 127 70.9
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 1.9e-43 179.1 127 70.1
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 2.1e-42 175.6 125 70.4
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 2.1e-42 175.6 125 70.4
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 2.1e-42 175.6 125 70.4
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 2.1e-42 175.6 125 70.4
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 2.1e-42 175.6 125 70.4
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 4.7e-42 174.5 127 70.1
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 1.8e-41 172.6 127 67.7
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 6.8e-41 170.6 125 71.2
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 1.5e-40 169.5 127 69.3
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.7e-39 166.0 106 79.2
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 2.2e-39 165.6 127 66.9
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 2.2e-39 165.6 127 66.9
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 2.2e-39 165.6 118 70.3
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 1.1e-38 163.3 127 66.1
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 1.1e-38 163.3 127 66.1
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 1.1e-38 163.3 127 66.1
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 1.1e-38 163.3 127 66.1
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 1.1e-38 163.3 127 66.1
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 1.1e-38 163.3 127 66.1
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.7e-37 158.7 107 73.8
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 2.7e-37 158.7 127 67.7
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 1.3e-36 156.4 120 68.3
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 1.1e-35 153.3 127 64.6
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 1.1e-35 153.3 127 64.6
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 4.2e-35 151.4 111 69.4
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 1.6e-34 149.4 127 63.8
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 6.1e-34 147.5 106 69.8
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 5.7e-32 141.0 141 56.0
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 8.3e-31 137.1 86 74.4
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.6e-29 132.9 79 79.7
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 2.1e-26 122.5 74 79.7
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 1.8e-25 119.4 118 55.1
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 6.8e-25 117.5 91 67.0
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 2.6e-24 115.5 74 75.7
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.7e-24 114.4 86 66.3
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 8.3e-23 110.5 128 47.7
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 1.1e-22 110.2 78 73.1
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.1e-22 108.2 81 67.9
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 3.9e-20 101.7 129 48.8
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 1.5e-19 99.8 129 47.3
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 2.5e-19 99.0 110 50.0
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 3.3e-19 98.6 74 64.9
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 5.2e-17 91.3 48 87.5
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 8.9e-17 90.5 64 70.3
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.9e-12 75.1 35 94.3
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-10 70.1 34 88.2
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 8.9e-09 63.9 73 47.9
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 7.5e-08 60.8 37 73.0
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.7e-07 59.7 53 58.5
CSS0018598 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 3.2e-06 55.5 42 61.9
Nitab4.5_0001152g0970 Nicotiana tabacum HOM05D003517 ORTHO05D025894 3.2e-06 55.5 41 68.3
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 3.2e-06 55.5 56 51.8
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 9.2e-06 53.9 23 100.0


User provided reference genes

Program Settings