Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 8.9e-156 553.5 272 100.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.8e-90 335.5 214 82.2
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.6e-80 303.5 185 83.2
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.8e-79 300.1 244 69.3
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 3.8e-66 255.8 201 68.2
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 6.8e-63 245.0 135 89.6
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 7.5e-62 241.5 135 88.1
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.4e-60 236.5 221 62.0
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 2.0e-59 233.4 135 84.4
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 1.3e-58 230.7 136 83.8
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.7e-58 230.3 135 84.4
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 1.7e-58 230.3 135 84.4
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 8.6e-58 228.0 135 83.7
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 1.1e-57 227.6 138 83.3
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.1e-57 227.6 135 83.0
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.1e-57 227.6 135 83.0
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 2.5e-57 226.5 134 83.6
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 1.6e-56 223.8 135 81.5
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 3.6e-56 222.6 135 81.5
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.4e-55 220.7 135 81.5
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 5.8e-54 215.3 138 80.4
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.4e-52 210.7 142 74.6
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 4.1e-52 209.1 137 79.6
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 7.0e-52 208.4 135 77.8
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 2.7e-51 206.5 134 76.9
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 3.5e-51 206.1 119 86.6
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 8.6e-50 201.4 137 78.8
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 8.6e-50 201.4 137 78.8
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 8.6e-50 201.4 137 78.8
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 1.5e-49 200.7 137 78.1
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.9e-49 200.3 137 78.1
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.9e-49 200.3 137 78.1
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 4.3e-49 199.1 137 78.1
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 2.3e-47 193.4 138 76.8
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 1.3e-45 187.6 159 65.4
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 4.1e-44 182.6 147 65.3
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 4.1e-44 182.6 147 65.3
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 4.1e-44 182.6 147 65.3
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 4.1e-44 182.6 147 65.3
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 4.1e-44 182.6 147 65.3
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 2.3e-42 176.8 143 64.3
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 7.3e-41 171.8 216 52.3
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.6e-40 170.6 135 69.6
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 4.4e-38 162.5 118 71.2
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 4.4e-38 162.5 118 71.2
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 2.4e-36 156.8 118 69.5
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 1.0e-34 151.4 135 60.7
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 1.1e-31 141.4 137 60.6
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 3.4e-30 136.3 93 73.1
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 3.5e-27 126.3 116 61.2
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 4.6e-27 125.9 129 55.8
CAN.G950.3 Capsicum annuum HOM05D003517 ORTHO05D028046 3.0e-26 123.2 71 84.5
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.9e-25 120.6 77 77.9
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.4e-20 104.4 98 63.3
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 6.0e-19 99.0 106 51.9
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 6.7e-18 95.5 67 68.7
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 7.4e-17 92.0 58 75.9
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.1e-15 88.2 52 82.7
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 6.9e-15 85.5 96 50.0
BNapus_Darmor_BZH_scaffold_234p00340 Brassica napus HOM05D003517 ORTHO05D028046 9.0e-15 85.1 49 77.6
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 1.2e-14 84.7 96 50.0
SHI20127 Sapria himalayana HOM05D003517 ORTHO05D028046 1.2e-14 84.7 70 61.4
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 4.5e-14 82.8 101 53.5
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 3.8e-13 79.7 48 79.2
Peaxi162Scf00456g00029 Petunia axillaris HOM05D003517 ORTHO05D009794 3.8e-13 79.7 63 69.8
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 1.9e-12 77.4 38 94.7
Nitab4.5_0000172g0410 Nicotiana tabacum HOM05D003517 ORTHO05D009794 9.3e-12 75.1 60 70.0
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.9e-11 72.0 47 74.5
MBI05_g05356_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009794 1.9e-09 67.4 39 84.6
Nitab4.5_0001152g0960 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.5e-09 67.0 57 66.7
Nitab4.5_0001152g0290 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.3e-09 66.6 65 60.0
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 3.3e-09 66.6 41 75.6
CAN.G564.28 Capsicum annuum HOM05D003517 ORTHO05D028046 1.4e-07 61.2 36 83.3
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 2.0e-06 57.4 59 59.3


User provided reference genes

Program Settings