Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g1340 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-128 463.4 237 100.0
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 5.9e-63 245.0 183 75.4
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 4.2e-61 238.8 262 59.2
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 2.1e-60 236.5 262 58.8
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.3e-57 227.3 258 58.5
SabraMtG0002200 Salix brachista HOM05D003666 ORTHO05D004770 3.1e-56 222.6 138 85.5
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 1.6e-55 220.3 136 86.0
Lj2A1223T77 Lonicera japonica HOM05D003666 ORTHO05D004770 3.5e-55 219.2 138 84.8
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 2.9e-54 216.1 136 84.6
arahy.Tifrunner.gnm1.ann1.75QRLF Arachis hypogaea HOM05D003666 ORTHO05D004770 3.3e-53 212.6 136 82.4
arahy.Tifrunner.gnm1.ann1.ZBC6LT Arachis hypogaea HOM05D003666 ORTHO05D004770 3.3e-53 212.6 136 82.4
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 4.2e-53 212.2 249 56.2
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 1.2e-52 210.7 134 83.6
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 1.2e-52 210.7 134 83.6
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 3.6e-52 209.1 245 56.7
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 4.7e-52 208.8 139 79.9
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 4.7e-52 208.8 240 56.7
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 5.2e-51 205.3 245 55.5
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 5.4e-48 195.3 245 53.9
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 5.4e-48 195.3 125 84.0
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 7.8e-47 191.4 125 81.6
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.9e-45 186.8 245 52.7
Nitab4.5_0000085g0130 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.8e-44 183.0 169 65.7
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.2e-42 177.6 108 87.0
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 4.9e-41 172.2 134 71.6
SHI36046 Sapria himalayana HOM05D003666 ORTHO05D004770 1.4e-40 170.6 119 79.8
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 2.6e-34 149.8 135 63.7
FAN09G4889 Fragaria x ananassa HOM05D003666 ORTHO05D004770 1.2e-31 141.0 104 77.9
Solyc00g500171.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.6e-31 139.0 82 91.5
Solyc00g500188.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.6e-31 139.0 82 91.5
Solyc00g500252.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.6e-31 139.0 82 91.5
Sopen11g018260 Solanum pennellii HOM05D003666 ORTHO05D004770 4.6e-31 139.0 82 91.5
Potri.007G061881 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.7e-30 137.1 82 90.2
RcHm_v2.0_MTg0498681 Rosa chinensis HOM05D003666 ORTHO05D004770 6.6e-30 135.2 82 89.0
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 5.6e-29 132.1 82 86.6
Gohir.A11G199666 Gossypium hirsutum HOM05D003666 ORTHO05D004770 9.5e-29 131.3 79 91.1
FAN09G4847 Fragaria x ananassa HOM05D003666 ORTHO05D004770 8.1e-28 128.3 78 87.2
Lalb_Chr00c24g0407381 Lupinus albus HOM05D003666 ORTHO05D004770 8.1e-28 128.3 82 84.1
Lalb_Chr02g0154061 Lupinus albus HOM05D003666 ORTHO05D004770 8.1e-28 128.3 82 84.1
CiPaw.06G021600 Carya illinoinensis HOM05D003666 ORTHO05D004770 1.1e-27 127.9 82 84.1
CDE02G3669 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 1.1e-27 127.9 82 85.4
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 1.1e-27 127.9 82 85.4
Nn1g09957 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.1e-27 127.9 82 85.4
Nn1g09958 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.1e-27 127.9 82 85.4
Nn1g10168 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.1e-27 127.9 82 85.4
TAR626G0972 Trochodendron aralioides HOM05D003666 ORTHO05D004770 5.2e-27 125.6 82 84.1
Hma1.2p1_0402F.1_g145120 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 1.2e-26 124.4 80 83.8
FAN09G2550 Fragaria x ananassa HOM05D003666 ORTHO05D004770 1.7e-25 120.6 73 86.3
unitig_87.g28022 Utricularia gibba HOM05D003666 ORTHO05D004770 3.7e-25 119.4 69 89.9
BcaC05g26876 Brassica carinata HOM05D003666 ORTHO05D004770 8.3e-25 118.2 77 83.1
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.1e-24 117.9 69 88.4
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.1e-24 117.9 69 88.4
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 1.3e-22 110.9 123 56.9
Migut.L00682 Erythranthe guttata HOM05D003666 ORTHO05D004770 3.3e-21 106.3 95 70.5
Nitab4.5_0000172g0120 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.5e-18 97.4 226 37.6
SEGI_01871 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 7.6e-18 95.1 81 70.4
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 4.9e-17 92.4 233 36.9
CiPaw.15G113100 Carya illinoinensis HOM05D003666 ORTHO05D004770 2.1e-15 87.0 105 52.4
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 4.8e-12 75.9 109 49.5
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 2.0e-10 70.5 69 46.4
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.2e-09 67.0 114 36.0
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 3.8e-09 66.2 114 35.1
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 3.8e-09 66.2 114 35.1
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 3.8e-09 66.2 115 35.7
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 3.8e-09 66.2 114 34.2
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.8e-09 66.2 114 34.2
Gohir.A08G104701 Gossypium hirsutum HOM05D003666 ORTHO05D004770 4.9e-09 65.9 36 88.9
Solyc11g030570.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.9e-09 65.9 36 86.1
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 6.4e-09 65.5 114 34.2
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 6.4e-09 65.5 114 34.2
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 8.4e-09 65.1 110 40.9
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-08 64.3 114 34.2
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-08 64.3 114 34.2
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-08 64.3 114 34.2
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-08 64.3 114 34.2
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 1.4e-08 64.3 36 86.1
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 1.4e-08 64.3 36 86.1
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 4.2e-08 62.8 114 34.2
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 4.2e-08 62.8 114 35.1
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.2e-08 62.8 50 66.0
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 7.1e-08 62.0 114 34.2
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 7.1e-08 62.0 114 34.2
Dinv06696 Davidia involucrata HOM05D003666 ORTHO05D016272 7.1e-08 62.0 36 83.3
Lalb_Chr00c54g0413591 Lupinus albus HOM05D003666 ORTHO05D004770 7.1e-08 62.0 41 82.9
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.2e-07 61.2 114 33.3
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-07 61.2 114 34.2
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 2.1e-07 60.5 114 34.2
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 2.1e-07 60.5 114 34.2
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 2.1e-07 60.5 114 34.2
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 2.1e-07 60.5 114 34.2
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 2.1e-07 60.5 114 34.2
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 2.1e-07 60.5 114 34.2
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 2.1e-07 60.5 114 34.2
Nitab4.5_0001346g0060 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.1e-07 60.5 34 85.3
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.7e-07 60.1 114 33.3
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.5e-07 59.7 114 32.5
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 4.6e-07 59.3 118 31.4
Pp3c23_19840 Physcomitrium patens HOM05D003666 ORTHO05D004770 7.9e-07 58.5 37 73.0
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 1.3e-06 57.8 110 33.6
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 1.7e-06 57.4 111 30.6
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-06 56.6 105 34.3
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 5.1e-06 55.8 114 33.3
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 8.7e-06 55.1 105 31.4


User provided reference genes

Program Settings