Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.3e-198 694.1 338 100.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.9e-102 376.7 302 69.2
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-96 357.5 246 76.4
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.6e-80 303.1 224 72.8
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 1.4e-70 270.8 159 86.2
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 1.4e-70 270.8 159 86.2
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 1.2e-69 267.7 159 84.9
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 4.8e-66 255.8 163 79.8
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 3.1e-65 253.1 201 66.7
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 7.6e-64 248.4 173 74.6
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 7.6e-64 248.4 173 74.6
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 3.8e-63 246.1 173 74.0
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 3.8e-63 246.1 173 74.0
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.4e-62 244.2 173 73.4
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 1.9e-62 243.8 165 77.6
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 7.1e-62 241.9 166 75.9
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.6e-61 240.7 166 75.9
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.6e-61 240.7 326 48.2
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 6.0e-61 238.8 190 67.9
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 8.7e-60 235.0 173 68.8
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 6.3e-58 228.8 162 75.9
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 2.6e-56 223.4 164 70.1
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 2.6e-56 223.4 164 70.1
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 2.6e-56 223.4 164 70.1
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 2.6e-56 223.4 164 70.1
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.2e-54 216.1 174 67.2
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.2e-54 216.1 174 67.2
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 2.1e-53 213.8 174 66.7
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 2.1e-53 213.8 174 66.7
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 2.1e-53 213.8 174 66.7
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 2.1e-53 213.8 174 66.7
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 2.1e-53 213.8 174 66.7
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 6.1e-53 212.2 174 66.1
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 3.9e-52 209.5 152 73.7
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 3.3e-51 206.5 167 62.9
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 1.7e-50 204.1 140 75.7
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 6.3e-50 202.2 162 66.7
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 6.3e-50 202.2 162 66.7
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-48 198.0 175 60.0
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 8.5e-47 191.8 106 86.8
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 1.4e-41 174.5 131 68.7
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 6.9e-41 172.2 109 78.0
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.9e-40 169.1 109 75.2
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.9e-40 169.1 109 75.2
Nitab4.5_0001152g0970 Nicotiana tabacum HOM05D003517 ORTHO05D025894 1.0e-39 168.3 253 44.3
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 1.2e-37 161.4 107 72.9
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 4.7e-37 159.5 110 70.0
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 8.8e-36 155.2 88 85.2
Nitab4.5_0005057g0050 Nicotiana tabacum HOM05D003517 ORTHO05D036924 4.4e-35 152.9 82 87.8
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 9.7e-35 151.8 210 49.5
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.0e-33 145.6 106 69.8
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 1.6e-32 144.4 135 63.0
Nitab4.5_0000172g2150 Nicotiana tabacum HOM05D003517 ORTHO05D036924 2.2e-31 140.6 90 77.8
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 8.5e-31 138.7 93 73.1
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.2e-29 134.8 107 65.4
Nitab4.5_0001152g0060 Nicotiana tabacum HOM05D030795 ORTHO05D025894 1.8e-28 131.0 124 61.3
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 2.3e-28 130.6 109 63.3
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 2.3e-28 130.6 83 74.7
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 3.1e-25 120.2 164 48.2
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 4.1e-25 119.8 164 47.6
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 7.7e-24 115.5 109 55.0
Gohir.A13G071500 Gossypium hirsutum HOM05D003517 ORTHO05D009798 1.0e-23 115.2 91 67.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 9.4e-22 108.6 105 55.2
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.6e-21 106.7 58 89.7
SHI26877 Sapria himalayana HOM05D030795 ORTHO05D025894 3.6e-21 106.7 128 50.0
GSVIVG01006670001 Vitis vinifera HOM05D030795 ORTHO05D025894 4.7e-21 106.3 122 53.3
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 7.5e-19 99.0 71 66.2
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 4.1e-17 93.2 87 56.3
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 2.7e-16 90.5 62 71.0
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 2.1e-13 80.9 56 69.6
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 2.8e-13 80.5 114 47.4
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.0e-12 77.0 63 60.3
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 5.2e-12 76.3 56 66.1
BraSC159t45733Z Brassica rapa HOM05D003517 ORTHO05D009798 2.2e-10 70.9 78 53.8
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 1.1e-09 68.6 60 61.7
Oeu030838.1 Olea europaea HOM05D030795 ORTHO05D025894 5.4e-09 66.2 142 37.3
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 2.5e-06 57.4 37 70.3


User provided reference genes

Program Settings