Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000134g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 2.2e-73 278.9 142 100.0
Nitab4.5_0001791g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 2.6e-66 255.4 144 93.8
Peaxi162Scf00006g00149 Petunia axillaris HOM05D004382 ORTHO05D005181 9.3e-64 246.9 138 91.3
GSVIVG01020484001 Vitis vinifera HOM05D004382 ORTHO05D005181 2.1e-60 235.7 138 87.0
CSS0016237 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 2.0e-58 229.2 139 83.5
TWI38G0625 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 4.5e-58 228.0 143 83.2
Oeu002809.1 Olea europaea HOM05D004382 ORTHO05D005181 1.0e-57 226.9 137 83.2
Nitab4.5_0002475g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 2.2e-57 225.7 137 84.7
MSTRG.7052 Avicennia marina HOM05D004382 ORTHO05D005181 3.8e-57 224.9 142 81.0
TWI38G0568 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 5.0e-57 224.6 143 81.8
CSS0001445 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 8.5e-57 223.8 142 82.4
CANSAT56G1367 Cannabis sativa HOM05D004382 ORTHO05D005181 8.5e-57 223.8 138 83.3
Gohir.A04G050200 Gossypium hirsutum HOM05D004382 ORTHO05D005181 8.5e-57 223.8 142 82.4
Prupe.4G143700 Prunus persica HOM05D004382 ORTHO05D005181 8.5e-57 223.8 138 83.3
Gohir.D05G330700 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.9e-56 222.6 142 82.4
Gorai.009G354500 Gossypium raimondii HOM05D004382 ORTHO05D005181 1.9e-56 222.6 142 82.4
Glyma.08G173700 Glycine max HOM05D004382 ORTHO05D005181 2.5e-56 222.2 138 81.9
Nitab4.5_0000313g0040 Nicotiana tabacum HOM05D004382 ORTHO05D005181 2.5e-56 222.2 132 85.6
PGR142G2616 Punica granatum HOM05D004382 ORTHO05D005181 2.5e-56 222.2 138 80.4
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea HOM05D004382 ORTHO05D005181 4.2e-56 221.5 138 79.7
Phvul.005G055200 Phaseolus vulgaris HOM05D004382 ORTHO05D005181 4.2e-56 221.5 138 81.2
Sabra11G0127600 Salix brachista HOM05D004382 ORTHO05D005181 5.5e-56 221.1 138 81.9
CiPaw.11G067100 Carya illinoinensis HOM05D004382 ORTHO05D005181 7.2e-56 220.7 138 81.2
ClCG07G010700 Citrullus lanatus HOM05D004382 ORTHO05D005181 7.2e-56 220.7 138 83.3
MD05G1215200 Malus domestica HOM05D004382 ORTHO05D005181 7.2e-56 220.7 142 79.6
VMungo1080G1647 Vigna mungo HOM05D004382 ORTHO05D005181 7.2e-56 220.7 138 80.4
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea HOM05D004382 ORTHO05D005181 1.6e-55 219.5 138 79.0
Peaxi162Scf00232g01129 Petunia axillaris HOM05D004382 ORTHO05D005181 2.1e-55 219.2 137 83.2
Sed0014118 Sechium edule HOM05D004382 ORTHO05D005181 2.1e-55 219.2 138 82.6
C06p30200 Brassica napus HOM05D004382 ORTHO05D005181 3.6e-55 218.4 142 77.5
BolC6t38183H Brassica oleracea HOM05D004382 ORTHO05D005181 3.6e-55 218.4 142 77.5
Nn3g20146 Nelumbo nucifera HOM05D002089 ORTHO05D011346 3.6e-55 218.4 138 82.6
SGA_v2.0_scaffold49G18168 Striga asiatica HOM05D004382 ORTHO05D005181 3.6e-55 218.4 137 82.5
BcaC08g45389 Brassica carinata HOM05D004382 ORTHO05D005181 4.6e-55 218.0 142 77.5
FAN25G3309 Fragaria x ananassa HOM05D004382 ORTHO05D005181 4.6e-55 218.0 138 79.7
Oeu003841.1 Olea europaea HOM05D004382 ORTHO05D005181 1.0e-54 216.9 139 82.0
FvH4_3g16050 Fragaria vesca HOM05D004382 ORTHO05D005181 1.3e-54 216.5 138 79.7
FAN11G1612 Fragaria x ananassa HOM05D004382 ORTHO05D005181 1.3e-54 216.5 138 79.7
Solyc07g066310.3 Solanum lycopersicum HOM05D004382 ORTHO05D005181 1.3e-54 216.5 137 83.9
Sopen07g034490 Solanum pennellii HOM05D004382 ORTHO05D005181 1.3e-54 216.5 137 83.9
Cc05_g15930 Coffea canephora HOM05D004382 ORTHO05D005181 1.8e-54 216.1 137 82.5
A07p27340 Brassica napus HOM05D004382 ORTHO05D005181 2.3e-54 215.7 142 77.5
BraA07t30375Z Brassica rapa HOM05D004382 ORTHO05D005181 2.3e-54 215.7 142 77.5
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 2.3e-54 215.7 142 76.8
Sed0025739 Sechium edule HOM05D004382 ORTHO05D005181 2.3e-54 215.7 138 81.2
PGSC0003DMG400022241 Solanum tuberosum HOM05D004382 ORTHO05D005181 3.0e-54 215.3 137 82.5
Aa31LG4G1950 Aethionema arabicum HOM05D004382 ORTHO05D005181 3.9e-54 214.9 142 76.1
FAN21G1818 Fragaria x ananassa HOM05D004382 ORTHO05D005181 5.1e-54 214.5 138 78.3
BcaB02g07194 Brassica carinata HOM05D004382 ORTHO05D005181 6.7e-54 214.2 142 76.8
Glyma.15G253700 Glycine max HOM05D004382 ORTHO05D005181 6.7e-54 214.2 138 80.4
CsaV3_4G007600 Cucumis sativus L. HOM05D004382 ORTHO05D005181 8.7e-54 213.8 138 80.4
Lalb_Chr01g0015971 Lupinus albus HOM05D004382 ORTHO05D005181 8.7e-54 213.8 135 81.5
Potri.001G438700 Populus trichocarpa HOM05D004382 ORTHO05D005181 8.7e-54 213.8 138 78.3
QL04p074767 Quercus lobata HOM05D004382 ORTHO05D005181 8.7e-54 213.8 137 78.1
Actinidia37109 Actinidia chinensis HOM05D004382 ORTHO05D005181 1.5e-53 213.0 140 81.4
Migut.H01700 Erythranthe guttata HOM05D004382 ORTHO05D005181 1.5e-53 213.0 137 79.6
Thhalv10019302m.g Eutrema salsugineum HOM05D004382 ORTHO05D005181 1.5e-53 213.0 142 75.4
Solyc12g017250.2 Solanum lycopersicum HOM05D004382 ORTHO05D005181 1.9e-53 212.6 137 78.8
BcaB05g25168 Brassica carinata HOM05D004382 ORTHO05D005181 3.3e-53 211.8 142 75.4
AUR62004366 Chenopodium quinoa HOM05D004382 ORTHO05D005181 3.3e-53 211.8 139 79.9
Sopen12g008070 Solanum pennellii HOM05D004382 ORTHO05D005181 3.3e-53 211.8 137 79.6
Ciclev10022793m.g Citrus clementina HOM05D004382 ORTHO05D005181 4.3e-53 211.5 142 76.8
Potri.011G142200 Populus trichocarpa HOM05D004382 ORTHO05D005181 4.3e-53 211.5 138 77.5
Sp5g34090 Schrenkiella parvula HOM05D004382 ORTHO05D005181 4.3e-53 211.5 142 74.6
Lj3g0019499 Lotus japonicus HOM05D004382 ORTHO05D005181 1.6e-52 209.5 138 76.8
A07p44190 Brassica napus HOM05D004382 ORTHO05D005181 2.8e-52 208.8 142 76.1
BraA07t31927Z Brassica rapa HOM05D004382 ORTHO05D005181 2.8e-52 208.8 142 76.1
CAN.G943.25 Capsicum annuum HOM05D004382 ORTHO05D005181 2.8e-52 208.8 137 83.2
MD10G1198300 Malus domestica HOM05D004382 ORTHO05D005181 2.8e-52 208.8 142 76.8
RcHm_v2.0_Chr5g0027021 Rosa chinensis HOM05D004382 ORTHO05D005181 3.7e-52 208.4 138 76.8
AUR62022575 Chenopodium quinoa HOM05D004382 ORTHO05D005181 4.8e-52 208.0 139 78.4
Ah.08g216320 Amaranthus hybridus HOM05D004382 ORTHO05D005181 6.3e-52 207.6 138 79.0
ClCG11G016280 Citrullus lanatus HOM05D004382 ORTHO05D005181 6.3e-52 207.6 142 76.1
SalBow8G0430 Salvia bowleyana HOM05D004382 ORTHO05D005181 6.3e-52 207.6 138 76.1
TPR.G10344 Trifolium pratense HOM05D004382 ORTHO05D005181 6.3e-52 207.6 138 76.1
vmacro09788 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 6.3e-52 207.6 143 77.6
BcaB02g08662 Brassica carinata HOM05D004382 ORTHO05D005181 8.2e-52 207.2 142 75.4
CARHR072720 Cardamine hirsuta HOM05D004382 ORTHO05D005181 8.2e-52 207.2 142 76.1
BcaC03g15860 Brassica carinata HOM05D004382 ORTHO05D005181 1.1e-51 206.8 142 74.6
A02p22470 Brassica napus HOM05D004382 ORTHO05D005181 1.1e-51 206.8 142 74.6
C02p36150 Brassica napus HOM05D004382 ORTHO05D005181 1.1e-51 206.8 142 74.6
BolC2t09629H Brassica oleracea HOM05D004382 ORTHO05D005181 1.1e-51 206.8 142 74.6
BraA02t07252Z Brassica rapa HOM05D004382 ORTHO05D005181 1.1e-51 206.8 142 74.6
EL10Ac4g08547 Beta vulgaris HOM05D004382 ORTHO05D005181 1.8e-51 206.1 139 79.1
BcaC08g47468 Brassica carinata HOM05D004382 ORTHO05D005181 1.8e-51 206.1 142 74.6
C06p52920 Brassica napus HOM05D004382 ORTHO05D005181 1.8e-51 206.1 142 74.6
BolC6t40310H Brassica oleracea HOM05D004382 ORTHO05D005181 1.8e-51 206.1 142 74.6
Sc16g0003480 Simmondsia chinensis HOM05D004382 ORTHO05D005181 1.8e-51 206.1 142 76.8
HanXRQChr08g0232801 Helianthus annuus HOM05D004382 ORTHO05D005181 2.4e-51 205.7 137 79.6
COL.COLO4_05073 Corchorus olitorius HOM05D004382 ORTHO05D005181 3.1e-51 205.3 143 76.9
AT1G79040 Arabidopsis thaliana HOM05D004382 ORTHO05D005181 4.1e-51 204.9 142 75.4
Medtr2g064650 Medicago truncatula HOM05D004382 ORTHO05D005181 4.1e-51 204.9 138 76.1
Ca_03704_v3 Cicer arietinum L. HOM05D004382 ORTHO05D005181 5.3e-51 204.5 138 74.6
Gorai.002G032900 Gossypium raimondii HOM05D004382 ORTHO05D005181 5.3e-51 204.5 143 78.3
Psat1g002320 Pisum sativum HOM05D004382 ORTHO05D005181 5.3e-51 204.5 138 74.6
unitig_8.g4771 Utricularia gibba HOM05D004382 ORTHO05D005181 5.3e-51 204.5 137 74.5
Lalb_Chr25g0285191 Lupinus albus HOM05D004382 ORTHO05D005181 9.1e-51 203.8 136 77.2
MBI02_g25371_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 9.1e-51 203.8 138 77.5
Manes.15G102500 Manihot esculenta HOM05D004382 ORTHO05D005181 1.2e-50 203.4 140 76.4
MSTRG.14535 Avicennia marina HOM05D004382 ORTHO05D005181 1.5e-50 203.0 142 75.4
Eucgr.F01447 Eucalyptus grandis HOM05D004382 ORTHO05D005181 1.5e-50 203.0 154 71.4
Potri.001G438800 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.5e-50 203.0 144 75.0
Carub.0002s2591 Capsella rubella HOM05D004382 ORTHO05D005181 2.6e-50 202.2 142 73.9
Lalb_Chr03g0031561 Lupinus albus HOM05D004382 ORTHO05D005181 3.4e-50 201.8 141 73.0
SalBow5G1313 Salvia bowleyana HOM05D004382 ORTHO05D005181 3.4e-50 201.8 138 77.5
SalBow5G2519 Salvia bowleyana HOM05D004382 ORTHO05D005181 3.4e-50 201.8 138 77.5
Thecc.07G156900 Theobroma cacao HOM05D004382 ORTHO05D005181 4.5e-50 201.4 142 76.1
Gohir.A01G037100 Gossypium hirsutum HOM05D004382 ORTHO05D005181 5.9e-50 201.1 142 75.4
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 5.9e-50 201.1 138 76.8
Potri.011G142300 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.3e-49 199.9 143 74.8
Aqoxy1G01569 Aquilegia oxysepala HOM05D004382 ORTHO05D005181 2.9e-49 198.7 139 74.1
HanXRQChr05g0160651 Helianthus annuus HOM05D004382 ORTHO05D005181 1.1e-48 196.8 138 76.1
Duzib187G1376 Durio zibethinus HOM05D004382 ORTHO05D005181 1.4e-48 196.4 142 74.6
Rhsim04G0006200 Rhododendron simsii HOM05D004382 ORTHO05D005181 1.4e-48 196.4 137 75.9
CDE04G0985 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 4.2e-48 194.9 138 72.5
TAR627G0744 Trochodendron aralioides HOM05D004382 ORTHO05D005181 4.2e-48 194.9 136 77.2
DCAR_013749 Daucus carota HOM05D004382 ORTHO05D005181 7.2e-48 194.1 143 74.1
DCAR_009633 Daucus carota HOM05D004382 ORTHO05D005181 1.2e-47 193.4 140 74.3
Sed0016780 Sechium edule HOM05D004382 ORTHO05D005181 1.6e-47 193.0 135 75.6
CDE12G0390 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 2.1e-47 192.6 138 71.0
THA.LOC104812349 Tarenaya hassleriana HOM05D004382 ORTHO05D005181 2.1e-47 192.6 125 77.6
ATR1098G153 Amborella trichopoda HOM05D004382 ORTHO05D005181 3.6e-47 191.8 143 72.0
AL2G39500 Arabidopsis lyrata HOM05D004382 ORTHO05D005181 3.6e-47 191.8 134 73.9
ECA236G0888 Erigeron canadensis HOM05D004382 ORTHO05D005181 3.6e-47 191.8 137 71.5
Atru.chr2.1854 Acer truncatum HOM05D004382 ORTHO05D005181 4.6e-47 191.4 142 73.2
CDE11G0376 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 1.5e-45 186.4 138 70.3
HPP92_016563 Vanilla planifolia HOM05D004382 ORTHO05D005181 2.0e-45 186.0 142 70.4
Manes.03G082900 Manihot esculenta HOM05D004382 ORTHO05D005181 2.6e-45 185.7 139 72.7
Hund10309 Selenicereus undatus HOM05D004382 ORTHO05D005181 5.7e-45 184.5 138 71.7
DCAR_016816 Daucus carota HOM05D004382 ORTHO05D005181 7.4e-45 184.1 137 73.0
PSO541G3267 Papaver somniferum HOM05D004382 ORTHO05D005181 2.8e-44 182.2 144 69.4
PSO675G7775 Papaver somniferum HOM05D004382 ORTHO05D005181 2.8e-44 182.2 144 69.4
Os08g0200300 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 8.2e-44 180.6 130 71.5
Lsat_1_v5_gn_7_116120 Lactuca sativa HOM05D004382 ORTHO05D005181 2.2e-41 172.6 143 65.7
Os07g0147550 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 2.2e-41 172.6 140 67.1
Sabra11G0127700 Salix brachista HOM05D004382 ORTHO05D005181 5.0e-41 171.4 144 66.7
Zm00001eb171230 Zea mays HOM05D004382 ORTHO05D005181 1.1e-40 170.2 118 76.3
Eucgr.F03186 Eucalyptus grandis HOM05D004382 ORTHO05D005181 2.5e-40 169.1 107 75.7
vmacro11652 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 7.2e-40 167.5 156 65.4
Sabra16G0296700 Salix brachista HOM05D004382 ORTHO05D005181 2.3e-38 162.5 162 60.5
PGSC0003DMG400002312 Solanum tuberosum HOM05D004382 ORTHO05D005181 6.7e-38 161.0 137 66.4
Rhsim06G0237200 Rhododendron simsii HOM05D006828 ORTHO05D008312 1.1e-37 160.2 91 85.7
Os07g0147500 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 2.0e-37 159.5 137 61.3
SEGI_14655 Sequoiadendron giganteum HOM05D004382 ORTHO05D005181 3.7e-36 155.2 135 60.0
Gohir.D01G024400 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.4e-35 152.5 113 72.6
SMO134G0197 Selaginella moellendorffii HOM05D004382 ORTHO05D005181 2.4e-35 152.5 120 64.2
Dinv19628 Davidia involucrata HOM05D006828 ORTHO05D008312 7.0e-35 151.0 88 83.0
Mapoly0001s0109 Marchantia polymorpha HOM05D004382 ORTHO05D005181 1.2e-34 150.2 117 65.8
MBI18_g37150_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 7.2e-32 141.0 138 58.7
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis HOM05D004382 ORTHO05D005181 1.8e-30 136.3 132 55.3
MELO3C016181.2 Cucumis melo HOM05D004382 ORTHO05D005181 2.3e-30 136.0 88 80.7
Pp3c27_2340 Physcomitrium patens HOM05D004382 ORTHO05D005181 2.3e-30 136.0 118 60.2
Cpa.g.c37194 Carica papaya HOM05D004382 ORTHO05D005181 8.8e-30 134.0 92 78.3
Mapoly0006s0055 Marchantia polymorpha HOM05D004382 ORTHO05D005181 2.0e-29 132.9 119 57.1
Pp3c16_5650 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.7e-28 129.8 118 58.5
Pp3c27_2320 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.7e-28 129.8 142 52.8
Pp3c5_4230 Physcomitrium patens HOM05D004382 ORTHO05D005181 2.2e-28 129.4 120 58.3
PGR083G0343 Punica granatum HOM05D004382 ORTHO05D005181 1.1e-27 127.1 82 75.6
CBR_g30109 Chara braunii HOM05D000004 ORTHO05D000002 3.0e-22 109.0 68 72.1
Cpa.g.c38697 Carica papaya HOM05D004382 ORTHO05D005181 7.5e-21 104.4 53 90.6
PRCOL_00003342 Prasinoderma coloniale HOM05D004382 ORTHO05D005181 1.3e-20 103.6 132 42.4
Haze_08525 Corylus avellana HOM05D004382 ORTHO05D005181 1.1e-19 100.5 142 45.8
Cre06.g261000 Chlamydomonas reinhardtii HOM05D004382 ORTHO05D005181 5.0e-17 91.7 80 57.5
Atru.chr6.732 Acer truncatum HOM05D004382 ORTHO05D005181 6.5e-17 91.3 82 62.2
TAR626G0945 Trochodendron aralioides HOM05D004382 ORTHO05D005181 1.8e-14 83.2 72 61.1
TPR.G25891 Trifolium pratense HOM05D004382 ORTHO05D005181 8.6e-09 64.3 136 38.2


User provided reference genes

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