Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 8.1e-132 473.8 245 100.0
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.8e-118 429.5 225 96.4
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.1e-117 426.8 225 96.0
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 3.0e-110 402.1 227 90.3
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 4.3e-109 398.3 240 85.0
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 4.3e-109 398.3 227 89.4
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 5.6e-109 397.9 223 90.1
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 3.7e-108 395.2 227 89.0
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 3.3e-101 372.1 225 82.7
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 7.4e-101 370.9 225 82.2
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 5.9e-98 361.3 227 79.7
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 2.9e-97 359.0 225 79.6
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 6.5e-97 357.8 227 79.3
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 1.4e-96 356.7 238 76.5
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 1.2e-95 353.6 236 75.8
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 2.7e-95 352.4 225 78.2
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 4.6e-95 351.7 231 78.4
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.3e-94 350.1 225 76.4
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 1.5e-93 346.7 228 76.3
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 4.3e-93 345.1 225 76.0
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 4.3e-93 345.1 211 79.1
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 5.7e-93 344.7 223 75.8
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 9.7e-93 344.0 240 74.6
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.3e-92 343.6 223 74.4
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 1.3e-92 343.6 240 72.5
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 2.2e-92 342.8 228 76.8
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 2.8e-92 342.4 223 77.6
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 4.8e-92 341.7 223 76.7
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 6.3e-92 341.3 222 75.2
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 6.3e-92 341.3 228 75.9
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 6.3e-92 341.3 246 72.4
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 8.2e-92 340.9 226 76.1
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 8.2e-92 340.9 228 75.9
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 1.1e-91 340.5 228 76.3
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 1.1e-91 340.5 226 77.0
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 1.4e-91 340.1 226 75.7
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 1.4e-91 340.1 225 74.7
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 2.4e-91 339.3 223 74.0
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 3.1e-91 339.0 238 71.4
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 5.3e-91 338.2 223 77.6
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 6.9e-91 337.8 235 72.8
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 9.1e-91 337.4 226 75.2
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 1.2e-90 337.0 235 71.5
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 1.2e-90 337.0 226 74.8
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 1.2e-90 337.0 225 74.7
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 1.5e-90 336.7 222 74.3
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 1.5e-90 336.7 223 72.6
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 2.6e-90 335.9 226 75.2
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 3.4e-90 335.5 227 75.3
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 5.9e-90 334.7 228 75.4
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 5.9e-90 334.7 228 74.1
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 5.9e-90 334.7 226 73.9
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 7.7e-90 334.3 235 70.6
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 1.3e-89 333.6 226 75.7
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 1.3e-89 333.6 225 73.8
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 2.2e-89 332.8 226 72.1
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 2.9e-89 332.4 240 70.0
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 5.0e-89 331.6 235 71.1
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 6.5e-89 331.3 235 72.3
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 6.5e-89 331.3 238 71.4
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 2.5e-88 329.3 223 74.0
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 3.2e-88 328.9 225 74.7
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 4.2e-88 328.6 223 71.7
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 7.2e-88 327.8 235 72.8
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 7.2e-88 327.8 241 68.9
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 9.4e-88 327.4 239 71.5
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 1.2e-87 327.0 235 71.5
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 4.6e-87 325.1 235 68.1
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 6.1e-87 324.7 217 74.7
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 5.1e-86 321.6 220 72.7
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 5.1e-86 321.6 238 70.2
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 6.7e-86 321.2 223 70.0
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 2.6e-85 319.3 235 71.1
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 3.3e-85 318.9 222 70.7
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 4.4e-85 318.5 233 68.2
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 5.7e-85 318.2 233 67.8
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 2.2e-84 316.2 205 75.6
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 3.7e-84 315.5 265 63.4
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 3.7e-84 315.5 228 71.1
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 4.8e-84 315.1 227 70.0
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 8.2e-84 314.3 236 67.8
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 8.2e-84 314.3 228 71.1
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 8.2e-84 314.3 242 67.4
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 8.2e-84 314.3 242 67.4
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 1.1e-83 313.9 240 68.3
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 1.4e-83 313.5 253 64.8
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.4e-83 313.5 253 64.8
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.4e-83 313.5 253 64.8
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 1.4e-83 313.5 228 67.1
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 1.8e-83 313.2 242 65.7
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 2.4e-83 312.8 228 70.6
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 4.1e-83 312.0 228 67.1
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 4.1e-83 312.0 228 67.1
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 6.9e-83 311.2 228 66.7
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 6.9e-83 311.2 253 64.0
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 1.2e-82 310.5 228 66.7
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.2e-82 310.5 253 64.4
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 2.0e-82 309.7 228 66.7
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 2.0e-82 309.7 223 66.4
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 2.6e-82 309.3 228 66.2
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 3.4e-82 308.9 240 65.0
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 5.9e-82 308.1 223 67.3
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 5.9e-82 308.1 223 67.3
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 1.0e-81 307.4 223 66.8
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 1.7e-81 306.6 223 66.4
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 1.7e-81 306.6 223 66.4
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 2.9e-81 305.8 235 66.8
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 2.9e-81 305.8 253 64.0
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 3.8e-81 305.4 240 64.6
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 3.8e-81 305.4 228 64.9
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 8.5e-81 304.3 242 64.9
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 5.5e-80 301.6 244 64.8
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 9.4e-80 300.8 221 67.9
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 7.9e-79 297.7 246 63.8
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 2.3e-78 296.2 223 70.4
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 4.4e-77 292.0 229 67.2
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.3e-76 290.4 200 70.0
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 1.0e-73 280.8 236 62.3
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 3.8e-73 278.9 219 63.9
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 1.2e-71 273.9 181 74.0
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.8e-68 262.7 177 71.2
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 1.0e-65 254.2 221 63.3
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 9.8e-61 237.7 185 64.9
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 1.8e-59 233.4 206 54.4
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 5.4e-59 231.9 211 55.9
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.7e-57 226.9 223 58.3
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 3.8e-57 225.7 209 55.0
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 8.6e-57 224.6 226 50.9
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 4.2e-56 222.2 223 56.1
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 2.3e-54 216.5 227 52.4
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 2.9e-49 199.5 224 47.3
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 3.3e-48 196.1 173 64.2
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 2.8e-47 193.0 220 48.2
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 8.0e-39 164.9 204 43.6
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 6.8e-38 161.8 104 76.9
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 6.0e-34 148.7 222 40.5
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 6.8e-22 108.6 116 55.2
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 1.4e-14 84.3 99 54.5


User provided reference genes

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