Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000131g0110 Nicotiana tabacum HOM05D006001 ORTHO05D006714 1.1e-128 463.4 247 100.0
PGSC0003DMG400009339 Solanum tuberosum HOM05D006001 ORTHO05D006714 7.7e-82 307.8 287 63.1
Sopen04g030170 Solanum pennellii HOM05D006001 ORTHO05D006714 8.0e-79 297.7 287 62.0
Solyc04g076410.3 Solanum lycopersicum HOM05D006001 ORTHO05D006714 5.9e-74 281.6 278 60.4
Peaxi162Scf00454g00211 Petunia axillaris HOM05D006001 ORTHO05D006714 5.8e-69 265.0 249 67.1
Nitab4.5_0025222g0020 Nicotiana tabacum HOM05D006001 ORTHO05D006714 7.0e-67 258.1 164 81.7
Nitab4.5_0000354g0120 Nicotiana tabacum HOM05D006001 ORTHO05D006714 2.3e-33 146.7 354 39.3
CAN.G475.16 Capsicum annuum HOM05D006001 ORTHO05D006714 3.3e-32 142.9 104 74.0
CAN.G1700.2 Capsicum annuum HOM05D006001 ORTHO05D006714 3.4e-29 132.9 363 34.4
PGSC0003DMG400002050 Solanum tuberosum HOM05D006001 ORTHO05D006714 3.8e-28 129.4 361 33.5
Peaxi162Scf00160g00103 Petunia axillaris HOM05D006001 ORTHO05D006714 1.9e-27 127.1 388 31.2
Nitab4.5_0019796g0010 Nicotiana tabacum HOM05D006001 ORTHO05D006714 2.7e-26 123.2 254 43.7
Sopen12g030020 Solanum pennellii HOM05D006001 ORTHO05D006714 1.1e-22 111.3 363 32.2
CAN.G475.17 Capsicum annuum HOM05D006001 ORTHO05D006714 5.8e-21 105.5 76 73.7
Dinv42605 Davidia involucrata HOM05D006001 ORTHO05D006714 6.5e-20 102.1 335 34.3
Oeu063699.1 Olea europaea HOM05D006001 ORTHO05D006714 2.5e-16 90.1 326 31.0
TWI12G0152 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 1.4e-14 84.3 81 58.0
GSVIVG01009188001 Vitis vinifera HOM05D006001 ORTHO05D006714 3.1e-14 83.2 355 31.8
Sc04g0007160 Simmondsia chinensis HOM05D006001 ORTHO05D006714 3.4e-13 79.7 270 32.2
Lj4A738G22 Lonicera japonica HOM05D006001 ORTHO05D006714 1.0e-12 78.2 85 51.8
Nn6g34170 Nelumbo nucifera HOM05D006001 ORTHO05D006714 1.1e-11 74.7 79 51.9
CiPaw.03G148200 Carya illinoinensis HOM05D006001 ORTHO05D006714 3.2e-11 73.2 117 41.9
Haze_22468 Corylus avellana HOM05D006001 ORTHO05D006714 5.5e-11 72.4 102 43.1
TWI56G0486 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 5.5e-11 72.4 80 51.2
Actinidia19626 Actinidia chinensis HOM05D006001 ORTHO05D006714 1.2e-10 71.2 83 47.0
CSS0018086 Camellia sinensis var. sinensis HOM05D006001 ORTHO05D006714 2.1e-10 70.5 398 27.1
Atru.chr13.1002 Acer truncatum HOM05D006001 ORTHO05D006714 3.5e-10 69.7 71 49.3
HanXRQChr03g0093751 Helianthus annuus HOM05D006001 ORTHO05D006714 4.6e-10 69.3 72 47.2
DCAR_023481 Daucus carota HOM05D006001 ORTHO05D006714 6.1e-10 68.9 77 51.9
SGA_v2.0_scaffold20G09128 Striga asiatica HOM05D006001 ORTHO05D006714 7.9e-10 68.6 301 29.2
Cpa.g.c29936.2 Carica papaya HOM05D006001 ORTHO05D006714 1.0e-09 68.2 82 48.8
PSO210G5625 Papaver somniferum HOM05D006001 ORTHO05D006714 1.0e-09 68.2 301 33.2
Sabra02G0088000 Salix brachista HOM05D006001 ORTHO05D006714 1.0e-09 68.2 238 33.6
BcaC06g32880 Brassica carinata HOM05D006001 ORTHO05D006714 1.3e-09 67.8 277 32.9
Thecc.08G071800 Theobroma cacao HOM05D006001 ORTHO05D006714 1.3e-09 67.8 227 30.4
TAR381G0479 Trochodendron aralioides HOM05D006001 ORTHO05D006714 2.3e-09 67.0 313 30.7
SGA_v2.0_scaffold24G10238 Striga asiatica HOM05D006001 ORTHO05D006714 3.9e-09 66.2 296 30.1
Oeu034401.1 Olea europaea HOM05D006001 ORTHO05D006714 6.7e-09 65.5 197 32.5
Rhsim07G0212300 Rhododendron simsii HOM05D006001 ORTHO05D006714 8.7e-09 65.1 168 39.9
unitig_578.g16728 Utricularia gibba HOM05D006001 ORTHO05D006714 8.7e-09 65.1 320 30.3
Carub.0007s1657 Capsella rubella HOM05D006001 ORTHO05D006714 1.1e-08 64.7 330 29.7
Lalb_Chr17g0344581 Lupinus albus HOM05D006001 ORTHO05D006714 2.5e-08 63.5 78 43.6
ECA240G2279 Erigeron canadensis HOM05D006001 ORTHO05D006714 3.3e-08 63.2 74 44.6
Potri.002G111500 Populus trichocarpa HOM05D006001 ORTHO05D006714 3.3e-08 63.2 341 26.7
Migut.C00706 Erythranthe guttata HOM05D006001 ORTHO05D006714 1.6e-07 60.8 348 27.3
Solyc12g087990.3 Solanum lycopersicum HOM05D006001 ORTHO05D006714 2.2e-07 60.5 190 33.2
HPP92_021096 Vanilla planifolia HOM05D006001 ORTHO05D006714 2.2e-07 60.5 158 37.3
Prupe.1G533200 Prunus persica HOM05D006001 ORTHO05D006714 2.8e-07 60.1 79 50.6
BcaC09g50862 Brassica carinata HOM05D006001 ORTHO05D006714 3.7e-07 59.7 330 28.2
Haze_22467 Corylus avellana HOM05D006001 ORTHO05D006714 3.7e-07 59.7 372 27.2
CANSAT11G1699 Cannabis sativa HOM05D006001 ORTHO05D006714 4.8e-07 59.3 295 28.1
Eucgr.H00032 Eucalyptus grandis HOM05D006001 ORTHO05D006714 4.8e-07 59.3 324 26.2
Lsat_1_v5_gn_3_133380 Lactuca sativa HOM05D006001 ORTHO05D006714 4.8e-07 59.3 74 44.6
Manes.18G058066 Manihot esculenta HOM05D006001 ORTHO05D006714 4.8e-07 59.3 235 31.1
Cfa013804 Carpinus fangiana HOM05D006001 ORTHO05D006714 6.3e-07 58.9 374 28.1
SalBow7G4402 Salvia bowleyana HOM05D006001 ORTHO05D006714 6.3e-07 58.9 389 25.4
BolC1t01909H Brassica oleracea HOM05D002298 ORTHO05D006714 8.2e-07 58.5 324 27.8
CiPaw.07G164600 Carya illinoinensis HOM05D006001 ORTHO05D006714 8.2e-07 58.5 231 31.2
Potri.005G153300 Populus trichocarpa HOM05D006001 ORTHO05D006714 8.2e-07 58.5 194 32.0
QL09p017955 Quercus lobata HOM05D006001 ORTHO05D006714 8.2e-07 58.5 279 28.7
MBI16_g12475_MAGBIO Magnolia biondii HOM05D006001 ORTHO05D006714 1.1e-06 58.2 327 27.5
MD08G1199700 Malus domestica HOM05D006001 ORTHO05D006714 1.1e-06 58.2 87 43.7
PSO170G4643 Papaver somniferum HOM05D006001 ORTHO05D006714 1.1e-06 58.2 302 29.8
Eucgr.L02666 Eucalyptus grandis HOM05D006001 ORTHO05D006714 1.4e-06 57.8 324 26.2
AT4G24500 Arabidopsis thaliana HOM05D006001 ORTHO05D006714 4.1e-06 56.2 321 27.1
A01p15870 Brassica napus HOM05D002298 ORTHO05D006714 4.1e-06 56.2 320 28.4
C01p19810 Brassica napus HOM05D002298 ORTHO05D006714 4.1e-06 56.2 322 27.6
CsaV3_2G036230 Cucumis sativus L. HOM05D006001 ORTHO05D006714 4.1e-06 56.2 303 27.7
BraA03t14592Z Brassica rapa HOM05D006001 ORTHO05D006714 5.3e-06 55.8 79 44.3
SHI11237 Sapria himalayana HOM05D006001 ORTHO05D006714 6.9e-06 55.5 69 42.0
AL7G28720 Arabidopsis lyrata HOM05D006001 ORTHO05D006714 9.0e-06 55.1 309 26.9
Cc00_g15770 Coffea canephora HOM05D006001 ORTHO05D006714 9.0e-06 55.1 339 29.8
MELO3C008828.2 Cucumis melo HOM05D006001 ORTHO05D006714 9.0e-06 55.1 328 26.8
Glyma.14G182400 Glycine max HOM05D006001 ORTHO05D006714 9.0e-06 55.1 76 40.8


User provided reference genes

Program Settings