Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000119g0030 Nicotiana tabacum HOM05D001115 ORTHO05D001023 4.8e-41 170.6 80 100.0
Nitab4.5_0002158g0030 Nicotiana tabacum HOM05D001115 ORTHO05D001023 7.2e-29 130.2 128 55.5
Sopen02g023300 Solanum pennellii HOM05D001115 ORTHO05D001023 2.9e-22 108.2 128 49.2
PGSC0003DMG400022440 Solanum tuberosum HOM05D001115 ORTHO05D001023 6.5e-22 107.1 128 49.2
CAN.G1164.11 Capsicum annuum HOM05D001115 ORTHO05D001023 1.6e-20 102.4 128 47.7
Solyc02g078450.3 Solanum lycopersicum HOM05D001115 ORTHO05D001023 1.6e-20 102.4 128 47.7
CSS0001393 Camellia sinensis var. sinensis HOM05D001115 ORTHO05D001023 4.1e-16 87.8 131 40.5
Dinv07543 Davidia involucrata HOM05D001115 ORTHO05D001023 4.1e-16 87.8 128 41.4
Gohir.A10G024600 Gossypium hirsutum HOM05D001115 ORTHO05D001023 2.0e-15 85.5 131 38.2
Gorai.011G026600 Gossypium raimondii HOM05D001115 ORTHO05D001023 2.0e-15 85.5 131 38.2
Duzib235G0287 Durio zibethinus HOM05D001115 ORTHO05D001023 4.5e-15 84.3 131 37.4
Gohir.D10G025300 Gossypium hirsutum HOM05D001115 ORTHO05D001023 4.5e-15 84.3 131 37.4
Ciclev10018057m.g Citrus clementina HOM05D001115 ORTHO05D001023 5.9e-15 84.0 79 50.6
Duzib160G0769 Durio zibethinus HOM05D001115 ORTHO05D001023 7.7e-15 83.6 131 37.4
Eucgr.D00635 Eucalyptus grandis HOM05D001115 ORTHO05D001023 1.0e-14 83.2 126 37.3
Cc02_g13180 Coffea canephora HOM05D001115 ORTHO05D001023 1.7e-14 82.4 132 37.9
Sabra11G0034900 Salix brachista HOM05D001115 ORTHO05D001023 5.0e-14 80.9 123 37.4
GSVIVG01002019001 Vitis vinifera HOM05D001115 ORTHO05D001023 8.5e-14 80.1 129 37.2
Potri.011G050900 Populus trichocarpa HOM05D001115 ORTHO05D001023 1.1e-13 79.7 131 37.4
CSS0027947 Camellia sinensis var. sinensis HOM05D001115 ORTHO05D001023 1.5e-13 79.3 128 35.9
PGR004G1130 Punica granatum HOM05D001115 ORTHO05D001023 1.5e-13 79.3 122 39.3
MD10G1295800 Malus domestica HOM05D001115 ORTHO05D001023 1.9e-13 79.0 124 36.3
Manes.16G026100 Manihot esculenta HOM05D001115 ORTHO05D001023 2.5e-13 78.6 133 34.6
Cpa.g.sc27.59 Carica papaya HOM05D001115 ORTHO05D001023 3.2e-13 78.2 131 35.9
CiPaw.09G058100 Carya illinoinensis HOM05D001115 ORTHO05D001023 3.2e-13 78.2 125 37.6
Ciclev10016622m.g Citrus clementina HOM05D001115 ORTHO05D001023 5.5e-13 77.4 125 38.4
Actinidia07579 Actinidia chinensis HOM05D001115 ORTHO05D001023 1.2e-12 76.3 128 35.2
Atru.chr10.1912 Acer truncatum HOM05D001115 ORTHO05D001023 1.6e-12 75.9 134 33.6
Lj2A287T55 Lonicera japonica HOM05D001115 ORTHO05D001023 1.6e-12 75.9 128 37.5
RcHm_v2.0_Chr5g0008101 Rosa chinensis HOM05D001115 ORTHO05D001023 2.1e-12 75.5 131 35.9
CiPaw.10G047300 Carya illinoinensis HOM05D001115 ORTHO05D001023 2.7e-12 75.1 120 38.3
Potri.004G041500 Populus trichocarpa HOM05D001115 ORTHO05D001023 2.7e-12 75.1 120 39.2
vmacro15899 Vaccinium macrocarpon HOM05D001115 ORTHO05D001023 3.6e-12 74.7 127 35.4
CANSAT35G1125 Cannabis sativa HOM05D001115 ORTHO05D001023 6.1e-12 73.9 128 35.9
MD05G1314500 Malus domestica HOM05D001115 ORTHO05D001023 1.4e-11 72.8 123 35.8
FAN16G2292 Fragaria x ananassa HOM05D001115 ORTHO05D001023 2.3e-11 72.0 131 34.4
FAN21G2614 Fragaria x ananassa HOM05D001115 ORTHO05D001023 2.3e-11 72.0 131 34.4
FAN25G2831 Fragaria x ananassa HOM05D001115 ORTHO05D001023 2.3e-11 72.0 131 34.4
QL05p039812 Quercus lobata HOM05D001115 ORTHO05D001023 2.3e-11 72.0 141 34.8
TAR624G0150 Trochodendron aralioides HOM05D001115 ORTHO05D001023 2.3e-11 72.0 128 34.4
Actinidia39455 Actinidia chinensis HOM05D001115 ORTHO05D001023 4.0e-11 71.2 128 35.9
FvH4_3g04940 Fragaria vesca HOM05D001115 ORTHO05D001023 4.0e-11 71.2 129 34.1
Rhsim02G0127800 Rhododendron simsii HOM05D001115 ORTHO05D001023 4.0e-11 71.2 142 32.4
TWI38G2403 Tripterygium wilfordii HOM05D001115 ORTHO05D001023 4.0e-11 71.2 126 34.9
FAN11G0571 Fragaria x ananassa HOM05D001115 ORTHO05D001023 5.2e-11 70.9 129 34.1
Prupe.4G044700 Prunus persica HOM05D001115 ORTHO05D001023 5.2e-11 70.9 131 32.8
Potri.013G134200 Populus trichocarpa HOM05D001115 ORTHO05D001023 6.7e-11 70.5 128 33.6
Potri.019G101800 Populus trichocarpa HOM05D001115 ORTHO05D001023 6.7e-11 70.5 128 32.8
Prupe.3G155500 Prunus persica HOM05D001115 ORTHO05D001023 6.7e-11 70.5 128 32.0
TWI36G0781 Tripterygium wilfordii HOM05D001115 ORTHO05D001023 6.7e-11 70.5 126 34.1
ClCG02G017570 Citrullus lanatus HOM05D001115 ORTHO05D001023 1.5e-10 69.3 127 33.1
TAR626G1725 Trochodendron aralioides HOM05D001115 ORTHO05D001023 1.5e-10 69.3 128 31.2
MBI17_g43193_MAGBIO Magnolia biondii HOM05D001115 ORTHO05D001023 2.0e-10 68.9 125 33.6
TWI18G0226 Tripterygium wilfordii HOM05D001115 ORTHO05D001023 2.0e-10 68.9 127 33.9
CiPaw.04G125100 Carya illinoinensis HOM05D001115 ORTHO05D001023 3.3e-10 68.2 126 32.5
VMungo1127G0219 Vigna mungo HOM05D001115 ORTHO05D001023 3.3e-10 68.2 129 31.8
arahy.Tifrunner.gnm1.ann1.Q3I7K5 Arachis hypogaea HOM05D001115 ORTHO05D001023 4.4e-10 67.8 76 42.1
Cpa.g.sc34.143 Carica papaya HOM05D001115 ORTHO05D001023 4.4e-10 67.8 127 30.7
Actinidia05619 Actinidia chinensis HOM05D001115 ORTHO05D001023 5.7e-10 67.4 130 31.5
Glyma.12G111700 Glycine max HOM05D001115 ORTHO05D001023 5.7e-10 67.4 128 31.2
GSVIVG01030374001 Vitis vinifera HOM05D001115 ORTHO05D001023 5.7e-10 67.4 116 34.5
AT2G20740 Arabidopsis thaliana HOM05D001115 ORTHO05D001023 7.5e-10 67.0 126 33.3
COL.COLO4_07553 Corchorus olitorius HOM05D001115 ORTHO05D001023 7.5e-10 67.0 130 31.5
Phvul.011G117300 Phaseolus vulgaris HOM05D001115 ORTHO05D001023 7.5e-10 67.0 128 32.8
Nn1g06594 Nelumbo nucifera HOM05D001115 ORTHO05D001023 9.7e-10 66.6 126 32.5
Sabra13G0114000 Salix brachista HOM05D000383 ORTHO05D000730 9.7e-10 66.6 125 33.6
AL3G53850 Arabidopsis lyrata HOM05D001115 ORTHO05D001023 1.3e-09 66.2 126 33.3
CANSAT78G1646 Cannabis sativa HOM05D001115 ORTHO05D001023 1.3e-09 66.2 126 31.7
Glyma.06G293700 Glycine max HOM05D001115 ORTHO05D001023 1.3e-09 66.2 128 31.2
Atru.chr6.3006 Acer truncatum HOM05D001115 ORTHO05D001023 1.7e-09 65.9 130 31.5
Os04g0679900 Oryza sativa ssp. japonica HOM05D001115 ORTHO05D001023 1.7e-09 65.9 121 28.9
ATR0680G167 Amborella trichopoda HOM05D001115 ORTHO05D001023 2.2e-09 65.5 125 29.6
arahy.Tifrunner.gnm1.ann1.E3DXNV Arachis hypogaea HOM05D001115 ORTHO05D001023 2.2e-09 65.5 128 32.0
QL08p038410 Quercus lobata HOM05D001115 ORTHO05D001023 2.2e-09 65.5 129 31.8
Ca_25914_v3 Cicer arietinum L. HOM05D001115 ORTHO05D001023 2.8e-09 65.1 128 30.5
MSTRG.12313 Avicennia marina HOM05D001115 ORTHO05D001023 3.7e-09 64.7 122 32.0
CARHR111410 Cardamine hirsuta HOM05D001115 ORTHO05D001023 3.7e-09 64.7 126 31.7
MELO3C013608.2 Cucumis melo HOM05D001115 ORTHO05D001023 3.7e-09 64.7 127 31.5
Lj3g0023189 Lotus japonicus HOM05D001115 ORTHO05D001023 3.7e-09 64.7 128 30.5
Oeu058381.1 Olea europaea HOM05D001115 ORTHO05D001023 3.7e-09 64.7 124 29.8
Sed0008977 Sechium edule HOM05D001115 ORTHO05D001023 3.7e-09 64.7 126 31.0
Aqoxy1G02522 Aquilegia oxysepala HOM05D001115 ORTHO05D001023 4.8e-09 64.3 125 29.6
Thhalv10002095m.g Eutrema salsugineum HOM05D001115 ORTHO05D001023 4.8e-09 64.3 126 31.7
Carub.0003s3526 Capsella rubella HOM05D001115 ORTHO05D001023 6.3e-09 63.9 126 31.7
MD17G1242500 Malus domestica HOM05D001115 ORTHO05D001023 6.3e-09 63.9 127 29.1
Sp3g33990 Schrenkiella parvula HOM05D001115 ORTHO05D001023 6.3e-09 63.9 126 30.2
TPR.G21758 Trifolium pratense HOM05D001115 ORTHO05D001023 6.3e-09 63.9 128 30.5
Actinidia12267 Actinidia chinensis HOM05D001115 ORTHO05D001023 8.2e-09 63.5 132 30.3
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 8.2e-09 63.5 127 30.7
Hma1.2p1_1201F.1_g266710 Hydrangea macrophylla HOM05D001115 ORTHO05D001023 8.2e-09 63.5 127 32.3
arahy.Tifrunner.gnm1.ann1.2K180M Arachis hypogaea HOM05D001115 ORTHO05D001023 1.1e-08 63.2 115 32.2
arahy.Tifrunner.gnm1.ann1.ALBM4S Arachis hypogaea HOM05D001115 ORTHO05D001023 1.1e-08 63.2 115 32.2
DCAR_004081 Daucus carota HOM05D001115 ORTHO05D001023 1.4e-08 62.8 127 32.3
Lalb_Chr19g0135301 Lupinus albus HOM05D001115 ORTHO05D001023 1.4e-08 62.8 128 30.5
Oeu017970.1 Olea europaea HOM05D001115 ORTHO05D001023 1.4e-08 62.8 128 29.7
Manes.13G147500 Manihot esculenta HOM05D001115 ORTHO05D001023 2.4e-08 62.0 126 28.6
Rhsim04G0067900 Rhododendron simsii HOM05D001115 ORTHO05D001023 3.1e-08 61.6 130 28.5
RhsimUnG0037000 Rhododendron simsii HOM05D001115 ORTHO05D001023 3.1e-08 61.6 130 28.5
RcHm_v2.0_Chr2g0126211 Rosa chinensis HOM05D001115 ORTHO05D001023 3.1e-08 61.6 121 29.8
A07p00030 Brassica napus HOM05D001115 ORTHO05D001023 4.1e-08 61.2 123 29.3
BraA07t27795Z Brassica rapa HOM05D001115 ORTHO05D001023 4.1e-08 61.2 123 29.3
FvH4_6g26130 Fragaria vesca HOM05D001115 ORTHO05D001023 4.1e-08 61.2 128 28.9
Lsat_1_v5_gn_3_39100 Lactuca sativa HOM05D001115 ORTHO05D001023 5.3e-08 60.8 76 39.5
PSO675G8670 Papaver somniferum HOM05D001115 ORTHO05D001023 5.3e-08 60.8 124 29.8
Sabra19G0112900 Salix brachista HOM05D001115 ORTHO05D001023 5.3e-08 60.8 156 27.6
vmacro09277 Vaccinium macrocarpon HOM05D001115 ORTHO05D001023 1.2e-07 59.7 130 27.7
Actinidia01888 Actinidia chinensis HOM05D001115 ORTHO05D001023 1.6e-07 59.3 128 30.5
THA.LOC104814499 Tarenaya hassleriana HOM05D001115 ORTHO05D001023 1.6e-07 59.3 126 28.6
BcaB03g16867 Brassica carinata HOM05D001115 ORTHO05D001023 2.0e-07 58.9 119 29.4
Peaxi162Scf00947g00027 Petunia axillaris HOM05D001115 ORTHO05D001023 2.7e-07 58.5 28 92.9
HanXRQChr17g0553551 Helianthus annuus HOM05D001115 ORTHO05D001023 3.5e-07 58.2 123 28.5
Nitab4.5_0000512g0160 Nicotiana tabacum HOM05D001115 ORTHO05D001023 3.5e-07 58.2 132 27.3
Nitab4.5_0002526g0050 Nicotiana tabacum HOM05D001115 ORTHO05D001023 3.5e-07 58.2 132 27.3
Dinv02169 Davidia involucrata HOM05D001115 ORTHO05D001023 5.9e-07 57.4 130 29.2
EL10Ac9g20707 Beta vulgaris HOM05D001115 ORTHO05D001023 7.7e-07 57.0 96 32.3
CSS0040668 Camellia sinensis var. sinensis HOM05D001115 ORTHO05D001023 1.0e-06 56.6 129 28.7
HPP92_021013 Vanilla planifolia HOM05D001115 ORTHO05D001023 1.0e-06 56.6 130 28.5
BcaC06g36765 Brassica carinata HOM05D001115 ORTHO05D001023 1.3e-06 56.2 123 27.6
C07p00170 Brassica napus HOM05D001115 ORTHO05D001023 1.3e-06 56.2 123 27.6
BolC7t40468H Brassica oleracea HOM05D001115 ORTHO05D001023 1.3e-06 56.2 123 27.6
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.3e-06 56.2 32 71.9
Peaxi162Scf00132g00422 Petunia axillaris HOM05D001115 ORTHO05D001023 1.3e-06 56.2 131 26.7
Solyc07g054160.3 Solanum lycopersicum HOM05D001115 ORTHO05D001023 1.3e-06 56.2 132 25.8
Sopen07g028090 Solanum pennellii HOM05D001115 ORTHO05D001023 1.3e-06 56.2 132 25.8
Zm00001eb065970 Zea mays HOM05D001115 ORTHO05D001023 2.2e-06 55.5 121 28.1
Thecc.06G190000 Theobroma cacao HOM05D001115 ORTHO05D001023 2.9e-06 55.1 32 71.9
PGR042G0194 Punica granatum HOM05D001115 ORTHO05D001023 3.8e-06 54.7 127 27.6
Eucgr.A01807 Eucalyptus grandis HOM05D001115 ORTHO05D001023 5.0e-06 54.3 118 28.0
Rhsim13G0176600 Rhododendron simsii HOM05D001115 ORTHO05D001023 6.5e-06 53.9 47 55.3
Duzib248G1488 Durio zibethinus HOM05D001115 ORTHO05D001023 8.5e-06 53.5 44 50.0


User provided reference genes

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