Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000084g0390 Nicotiana tabacum HOM05D000457 ORTHO05D000560 3.0e-34 147.9 72 100.0
Nitab4.5_0000572g0120 Nicotiana tabacum HOM05D000457 ORTHO05D000560 6.1e-19 97.1 50 90.0
Peaxi162Scf00444g00018 Petunia axillaris HOM05D000457 ORTHO05D000560 2.8e-16 88.2 51 84.3
Peaxi162Scf00444g00130 Petunia axillaris HOM05D000457 ORTHO05D000560 2.8e-16 88.2 51 84.3
PGSC0003DMG401009494 Solanum tuberosum HOM05D000457 ORTHO05D000560 4.5e-14 80.9 50 74.0
Solyc03g008013.1 Solanum lycopersicum HOM05D000457 ORTHO05D000560 8.5e-13 76.6 50 70.0
Solyc03g008015.1 Solanum lycopersicum HOM05D000457 ORTHO05D000560 8.5e-13 76.6 50 70.0
Sopen03g003950 Solanum pennellii HOM05D000457 ORTHO05D000560 1.1e-12 76.3 50 70.0
Sabra17G0119600 Salix brachista HOM05D000457 ORTHO05D000560 2.5e-12 75.1 50 64.0
PGSC0003DMG400010125 Solanum tuberosum HOM05D000457 ORTHO05D000560 5.5e-12 73.9 50 68.0
Glyma.10G231600 Glycine max HOM05D000457 ORTHO05D000560 1.6e-11 72.4 50 68.0
Hma1.2p1_0274F.1_g110230 Hydrangea macrophylla HOM05D000457 ORTHO05D000560 2.7e-11 71.6 50 64.0
Medtr1g100150 Medicago truncatula HOM05D000457 ORTHO05D000560 3.6e-11 71.2 50 62.0
DCAR_009390 Daucus carota HOM05D000457 ORTHO05D000560 4.6e-11 70.9 48 60.4
Lj1C851T4 Lonicera japonica HOM05D000457 ORTHO05D000560 6.1e-11 70.5 50 66.0
Atru.ctg97_1.10 Acer truncatum HOM05D000457 ORTHO05D000560 1.0e-10 69.7 45 68.9
QL09p013065 Quercus lobata HOM05D000457 ORTHO05D000560 1.0e-10 69.7 50 56.0
Sabra04G0052600 Salix brachista HOM05D000457 ORTHO05D000560 1.0e-10 69.7 50 62.0
Oeu022607.1 Olea europaea HOM05D000457 ORTHO05D000560 1.4e-10 69.3 45 66.7
TPR.G26983 Trifolium pratense HOM05D000457 ORTHO05D000560 1.8e-10 68.9 50 60.0
Actinidia08573 Actinidia chinensis HOM05D000457 ORTHO05D000560 3.0e-10 68.2 46 65.2
CiPaw.05G263100 Carya illinoinensis HOM05D000457 ORTHO05D000560 3.0e-10 68.2 44 63.6
Migut.F00305 Erythranthe guttata HOM05D000457 ORTHO05D000560 3.0e-10 68.2 44 68.2
TAR375G0690 Trochodendron aralioides HOM05D000457 ORTHO05D000560 3.0e-10 68.2 42 69.0
Potri.004G079200 Populus trichocarpa HOM05D000457 ORTHO05D000560 3.9e-10 67.8 50 60.0
Ciclev10007201m.g Citrus clementina HOM05D000457 ORTHO05D000560 5.1e-10 67.4 51 60.8
Lsat_1_v5_gn_2_131181 Lactuca sativa HOM05D000457 ORTHO05D000560 5.1e-10 67.4 50 62.0
Dinv28393 Davidia involucrata HOM05D000457 ORTHO05D000560 6.7e-10 67.0 50 62.0
Eucgr.A02749 Eucalyptus grandis HOM05D000457 ORTHO05D000560 8.8e-10 66.6 45 66.7
HanXRQChr14g0462481 Helianthus annuus HOM05D000457 ORTHO05D000560 1.1e-09 66.2 43 69.8
Lj5g0010811 Lotus japonicus HOM05D000457 ORTHO05D000560 1.1e-09 66.2 43 67.4
Atru.ctg97_1.6 Acer truncatum HOM05D000457 ORTHO05D000560 1.5e-09 65.9 45 62.2
MD07G1278100 Malus domestica HOM05D000457 ORTHO05D000560 1.5e-09 65.9 45 62.2
MD01G1207200 Malus domestica HOM05D000457 ORTHO05D000560 2.5e-09 65.1 46 60.9
Migut.F00303 Erythranthe guttata HOM05D000457 ORTHO05D000560 4.3e-09 64.3 44 63.6
FAN03G2403 Fragaria x ananassa HOM05D000457 ORTHO05D000560 4.3e-09 64.3 45 64.4
GSVIVG01028873001 Vitis vinifera HOM05D000457 ORTHO05D000560 4.3e-09 64.3 45 60.0
RcHm_v2.0_Chr1g0378121 Rosa chinensis HOM05D000457 ORTHO05D000560 7.4e-09 63.5 45 64.4
COL.COLO4_28013 Corchorus olitorius HOM05D000457 ORTHO05D000560 9.7e-09 63.2 50 54.0
Duzib068G0568 Durio zibethinus HOM05D000457 ORTHO05D000560 9.7e-09 63.2 47 57.4
FAN06G0703 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.3e-08 62.8 45 62.2
FAN06G1968 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.3e-08 62.8 45 62.2
Manes.06G151600 Manihot esculenta HOM05D000457 ORTHO05D000560 1.3e-08 62.8 40 62.5
Actinidia34150 Actinidia chinensis HOM05D000457 ORTHO05D000560 1.7e-08 62.4 48 58.3
Nn1g01616 Nelumbo nucifera HOM05D000457 ORTHO05D000560 1.7e-08 62.4 43 60.5
PGR042G0937 Punica granatum HOM05D000457 ORTHO05D000560 2.2e-08 62.0 45 62.2
QL09p013093 Quercus lobata HOM05D000457 ORTHO05D000560 2.2e-08 62.0 50 52.0
ECA238G2531 Erigeron canadensis HOM05D000457 ORTHO05D000560 2.8e-08 61.6 51 56.9
FvH4_7g30122 Fragaria vesca HOM05D000457 ORTHO05D000560 2.8e-08 61.6 62 46.8
QL09p013073 Quercus lobata HOM05D000457 ORTHO05D000560 2.8e-08 61.6 57 49.1
Thecc.03G182800 Theobroma cacao HOM05D000457 ORTHO05D000560 2.8e-08 61.6 50 54.0
Thecc.K0007600 Theobroma cacao HOM05D000457 ORTHO05D000560 2.8e-08 61.6 50 54.0
FvH4_7g30141 Fragaria vesca HOM05D000457 ORTHO05D000560 3.7e-08 61.2 48 56.2
Prupe.2G299900 Prunus persica HOM05D000457 ORTHO05D000560 3.7e-08 61.2 42 66.7
RcHm_v2.0_Chr1g0378171 Rosa chinensis HOM05D000457 ORTHO05D000560 3.7e-08 61.2 48 54.2
ClCG05G008290 Citrullus lanatus HOM05D000457 ORTHO05D000560 6.3e-08 60.5 50 60.0
CANSAT21G0434 Cannabis sativa HOM05D000457 ORTHO05D000560 8.2e-08 60.1 51 54.9
SalBow4G2050 Salvia bowleyana HOM05D000457 ORTHO05D000560 8.2e-08 60.1 32 78.1
Migut.F00304 Erythranthe guttata HOM05D000457 ORTHO05D000560 1.1e-07 59.7 44 56.8
Lj1g0002824 Lotus japonicus HOM05D000457 ORTHO05D000560 1.1e-07 59.7 43 58.1
Medtr1g100130 Medicago truncatula HOM05D000457 ORTHO05D000560 1.4e-07 59.3 43 58.1
RcHm_v2.0_Chr1g0378151 Rosa chinensis HOM05D000457 ORTHO05D000560 1.4e-07 59.3 45 57.8
FAN06G0501 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.8e-07 58.9 42 64.3
CsaV3_3G017380 Cucumis sativus L. HOM05D000457 ORTHO05D000560 2.4e-07 58.5 78 43.6
FAN01G2124 Fragaria x ananassa HOM05D000457 ORTHO05D000560 2.4e-07 58.5 42 64.3
Gohir.A09G043100 Gossypium hirsutum HOM05D000457 ORTHO05D000560 2.4e-07 58.5 50 54.0
Gohir.D09G043700 Gossypium hirsutum HOM05D000457 ORTHO05D000560 2.4e-07 58.5 50 54.0
Gorai.006G050700 Gossypium raimondii HOM05D000457 ORTHO05D000560 2.4e-07 58.5 50 54.0
Lalb_Chr04g0259141 Lupinus albus HOM05D000457 ORTHO05D000560 3.1e-07 58.2 45 57.8
Psat6g196560 Pisum sativum HOM05D000457 ORTHO05D000560 3.1e-07 58.2 43 60.5
PSO541G2969 Papaver somniferum HOM05D000457 ORTHO05D000560 4.1e-07 57.8 43 51.2
CiPaw.01G082800 Carya illinoinensis HOM05D000457 ORTHO05D000560 5.3e-07 57.4 42 59.5
THA.LOC104818163 Tarenaya hassleriana HOM05D000457 ORTHO05D000560 5.3e-07 57.4 45 51.1
arahy.Tifrunner.gnm1.ann1.HAEB4P Arachis hypogaea HOM05D000457 ORTHO05D000560 6.9e-07 57.0 43 48.8
arahy.Tifrunner.gnm1.ann1.SV1BLK Arachis hypogaea HOM05D000457 ORTHO05D000560 6.9e-07 57.0 43 48.8
FAN03G3039 Fragaria x ananassa HOM05D000457 ORTHO05D003394 6.9e-07 57.0 42 61.9
FAN06G0765 Fragaria x ananassa HOM05D000457 ORTHO05D000560 6.9e-07 57.0 46 56.5
CiPaw.01G082900 Carya illinoinensis HOM05D000457 ORTHO05D000560 9.1e-07 56.6 43 55.8
Haze_00035 Corylus avellana HOM05D000457 ORTHO05D000560 1.2e-06 56.2 47 51.1
Sp5g12950 Schrenkiella parvula HOM05D000457 ORTHO05D000560 1.2e-06 56.2 43 55.8
Sed0015664 Sechium edule HOM05D000457 ORTHO05D000560 1.5e-06 55.8 43 55.8
TAR629G1742 Trochodendron aralioides HOM05D000457 ORTHO05D000560 1.5e-06 55.8 43 55.8
CARHR189580 Cardamine hirsuta HOM05D000457 ORTHO05D000560 2.0e-06 55.5 43 48.8
Lalb_Chr17g0339271 Lupinus albus HOM05D000457 ORTHO05D000560 2.6e-06 55.1 40 60.0
AL6G35310 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 3.4e-06 54.7 43 51.2
Sp2g23320 Schrenkiella parvula HOM05D000457 ORTHO05D000560 3.4e-06 54.7 43 53.5
CiPaw.01G064600 Carya illinoinensis HOM05D000457 ORTHO05D000560 4.5e-06 54.3 40 57.5
Sed0002331 Sechium edule HOM05D000457 ORTHO05D000560 4.5e-06 54.3 45 57.8
Sed0009715 Sechium edule HOM05D000457 ORTHO05D000560 4.5e-06 54.3 43 58.1
AL6G35300 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 7.7e-06 53.5 43 46.5
Haze_15542 Corylus avellana HOM05D000457 ORTHO05D000560 7.7e-06 53.5 43 51.2
FvH4_7g30121 Fragaria vesca HOM05D000564 ORTHO05D004145 7.7e-06 53.5 43 53.5
MBI04_g39567_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 7.7e-06 53.5 43 48.8


User provided reference genes

Program Settings