Gene: COL.COLO4_28013
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_28013
- Transcript Identifier COL.rna26736
- Gene Type Coding gene
- Location AWUE01019730.1 : 8380-11752 : positive
Gene Family Information
- ID HOM05D000457
- #Genes/#Species 1151/100
- Phylogenetic origin
- ID ORTHO05D000560
- #Genes/#Species 786/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna26736
- GenBank OMO71821.1
- id gene27985
- gene_name COLO4_28013
- uniprot A0A1R3HNP5
Descriptions
- Description Cytochrome b245, heavy chain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055072 | ISO | PLAZA Integrative Orthology | iron ion homeostasis | AT1G01580 |
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT1G01580 |
| GO:0033214 | ISO | PLAZA Integrative Orthology | siderophore-dependent iron import into cell | AT1G01580 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0000293 | ISO | PLAZA Integrative Orthology | ferric-chelate reductase activity | AT1G23020 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G01580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013130 | Ferric reductase transmembrane component-like domain |
| IPR017938 | Riboflavin synthase-like beta-barrel |
| IPR039261 | Ferredoxin-NADP reductase (FNR), nucleotide-binding domain |
| IPR013121 | Ferric reductase, NAD binding domain |
| IPR013112 | FAD-binding 8 |
| IPR000778 | Cytochrome b245, heavy chain |
| Mapman id | Description |
|---|---|
| 25.4.1.1 | Nutrient uptake.metal homeostasis.reduction-based strategy uptake.metal ion-chelate reductase (FRO) |