Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 7.0e-161 570.5 271 100.0
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.1e-148 528.5 265 95.5
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.4e-139 498.4 265 88.7
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 4.9e-138 494.6 265 86.4
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 2.7e-136 488.8 265 86.0
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 3.5e-136 488.4 265 86.4
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 7.8e-136 487.3 263 87.5
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 5.1e-135 484.6 265 85.7
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 5.8e-131 471.1 249 88.4
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 9.3e-129 463.8 273 80.2
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.1e-102 377.1 265 69.1
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 2.9e-98 362.5 201 82.6
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 9.3e-97 357.5 309 60.2
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 2.5e-94 349.4 256 68.0
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 1.8e-92 343.2 265 61.1
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 5.3e-92 341.7 265 61.5
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 7.7e-91 337.8 265 61.9
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 7.7e-91 337.8 266 62.0
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 1.3e-90 337.0 265 61.9
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 7.4e-86 321.2 255 60.4
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.8e-85 319.3 265 59.2
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 4.1e-84 315.5 254 57.9
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 2.0e-83 313.2 254 57.9
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 5.0e-82 308.5 263 56.3
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 2.5e-81 306.2 269 55.4
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.6e-80 303.5 265 54.0
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.5e-78 297.0 267 55.4
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 2.0e-78 296.6 265 54.3
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 9.7e-78 294.3 269 54.3
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 3.7e-77 292.4 264 55.3
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 4.8e-77 292.0 271 51.3
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 8.2e-77 291.2 255 55.7
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 1.4e-76 290.4 268 54.5
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.4e-76 289.7 267 55.8
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 2.4e-76 289.7 275 53.8
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 4.1e-76 288.9 268 55.2
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.2e-75 287.3 267 55.1
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 2.0e-75 286.6 253 56.5
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 3.5e-75 285.8 273 53.8
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 3.5e-75 285.8 263 52.5
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 7.7e-75 284.6 268 54.9
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 1.7e-74 283.5 265 54.0
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 2.5e-73 279.6 268 53.7
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 2.5e-73 279.6 268 53.4
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 7.2e-73 278.1 263 52.5
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 1.6e-72 276.9 270 53.0
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 1.6e-72 276.9 265 51.7
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.6e-72 276.9 252 54.0
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 1.0e-71 274.2 265 51.3
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 8.8e-71 271.2 226 57.1
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 8.8e-71 271.2 257 52.5
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 2.6e-70 269.6 265 49.8
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 3.3e-70 269.2 262 51.9
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 9.7e-70 267.7 267 53.9
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 1.3e-69 267.3 267 50.6
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 3.7e-69 265.8 268 48.9
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 8.2e-69 264.6 265 50.9
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 1.8e-68 263.5 267 52.8
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 3.1e-68 262.7 253 52.2
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 3.1e-68 262.7 269 50.2
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 9.1e-68 261.2 234 53.8
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 9.1e-68 261.2 271 52.4
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 3.5e-67 259.2 271 52.0
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 3.8e-66 255.8 268 51.1
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.1e-65 254.2 268 50.0
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.1e-65 254.2 268 50.7
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.5e-65 253.8 274 47.4
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 2.5e-65 253.1 271 50.6
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 7.2e-65 251.5 219 54.8
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 9.4e-65 251.1 259 48.6
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 3.6e-64 249.2 265 46.0
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 3.6e-64 249.2 265 46.0
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 3.6e-64 249.2 265 46.0
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 3.6e-64 249.2 270 50.0
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 4.7e-64 248.8 268 47.8
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 6.1e-64 248.4 211 57.8
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 8.0e-64 248.1 251 49.8
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 1.0e-63 247.7 251 50.2
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 1.8e-63 246.9 192 62.0
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 2.3e-63 246.5 270 47.0
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.0e-63 245.7 199 58.8
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 5.2e-63 245.4 211 57.8
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 8.8e-63 244.6 265 45.3
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 1.2e-62 244.2 249 50.6
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.5e-62 243.8 268 46.3
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 2.0e-62 243.4 266 48.5
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 3.4e-62 242.7 266 45.1
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 3.4e-62 242.7 262 48.5
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 4.4e-62 242.3 266 45.5
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 1.7e-61 240.4 229 52.0
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 4.8e-61 238.8 264 45.1
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 4.8e-61 238.8 244 49.2
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 6.3e-61 238.4 267 45.3
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 6.3e-61 238.4 267 47.9
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 8.3e-61 238.0 240 48.8
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 1.1e-60 237.7 266 45.5
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 1.4e-60 237.3 266 44.0
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.4e-60 237.3 265 47.9
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 1.8e-60 236.9 256 48.0
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 1.8e-60 236.9 255 47.8
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 1.6e-59 233.8 253 49.4
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.6e-59 233.8 248 48.8
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 2.0e-59 233.4 262 46.6
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 7.7e-59 231.5 250 48.8
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 7.7e-59 231.5 268 43.7
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 1.7e-58 230.3 267 43.8
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 1.7e-58 230.3 267 43.8
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 2.9e-58 229.6 237 48.9
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 5.0e-58 228.8 287 41.1
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 1.5e-57 227.3 254 46.1
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 2.5e-57 226.5 253 45.8
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 9.5e-57 224.6 267 42.7
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 9.5e-57 224.6 267 42.7
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 9.5e-57 224.6 271 45.4
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.2e-56 224.2 270 43.3
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 1.6e-56 223.8 254 44.5
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 1.6e-56 223.8 314 41.4
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 2.8e-56 223.0 219 47.9
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 4.7e-56 222.2 257 45.5
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 4.7e-56 222.2 210 48.6
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 1.2e-54 217.6 211 49.3
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 1.5e-54 217.2 274 46.4
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.6e-54 216.5 270 43.3
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 4.4e-54 215.7 273 46.5
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 5.7e-54 215.3 214 48.6
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.3e-53 214.2 228 47.8
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 4.9e-53 212.2 210 48.6
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 1.1e-52 211.1 265 45.3
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.4e-52 210.7 221 49.8
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 2.4e-52 209.9 251 46.2
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 2.0e-51 206.8 288 42.0
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.0e-51 206.8 251 45.8
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 2.7e-51 206.5 255 45.1
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 3.5e-51 206.1 288 42.7
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.7e-50 203.8 194 57.7
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 1.5e-49 200.7 265 40.0
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 1.5e-49 200.7 214 46.7
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 3.3e-49 199.5 267 43.4
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 5.6e-49 198.7 289 39.8
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 3.6e-48 196.1 179 53.6
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 4.7e-48 195.7 235 43.8
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 9.8e-46 188.0 180 52.8
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.3e-45 187.6 170 52.9
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 6.4e-45 185.3 264 40.2
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 4.6e-43 179.1 163 53.4
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 1.0e-42 177.9 221 42.1
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 5.0e-42 175.6 265 41.1
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 1.5e-41 174.1 275 36.4
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 4.3e-41 172.6 85 90.6
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.4e-39 167.5 87 89.7
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 4.0e-39 166.0 245 41.2
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 1.2e-38 164.5 302 32.8
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 4.4e-38 162.5 221 37.6
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 5.8e-38 162.2 145 55.2
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 1.3e-37 161.0 240 40.0
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 4.9e-37 159.1 235 40.4
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 8.3e-37 158.3 183 42.6
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 6.0e-35 152.1 221 42.1
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 2.5e-33 146.7 166 41.0
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 5.6e-33 145.6 139 55.4
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.2e-32 144.4 240 36.2
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 3.6e-32 142.9 131 51.9
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.1e-31 141.4 179 43.6
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 1.8e-31 140.6 318 30.2
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 2.2e-29 133.7 223 35.4
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 3.5e-27 126.3 120 52.5
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 7.8e-27 125.2 228 34.6
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 3.9e-26 122.9 265 30.9
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 3.3e-25 119.8 167 40.7
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 3.3e-25 119.8 135 47.4
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 7.3e-25 118.6 81 67.9
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 9.5e-25 118.2 264 30.3
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 1.2e-24 117.9 254 36.2
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 3.8e-21 106.3 256 30.9
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 2.5e-17 93.6 102 43.1
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-15 87.4 188 28.2
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 2.0e-14 84.0 94 40.4
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 2.2e-13 80.5 82 52.4
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 6.4e-13 79.0 81 50.6
Lj1A1128T58 Lonicera japonica HOM05D003612 ORTHO05D004323 9.3e-12 75.1 47 76.6
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 3.5e-11 73.2 129 36.4
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 1.5e-09 67.8 43 62.8
Actinidia09310 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.4e-07 61.2 45 62.2
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 5.3e-07 59.3 61 49.2
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 9.0e-07 58.5 57 50.9


User provided reference genes

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