Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000081g0240 Nicotiana tabacum HOM05D000627 ORTHO05D000365 8.1e-82 307.0 152 100.0
Nitab4.5_0001975g0030 Nicotiana tabacum HOM05D000627 ORTHO05D000365 5.9e-56 221.1 136 84.6
CAN.G1248.10 Capsicum annuum HOM05D000627 ORTHO05D000365 1.0e-44 183.7 136 71.3
Solyc01g102300.3 Solanum lycopersicum HOM05D000627 ORTHO05D000365 3.1e-41 172.2 136 67.6
PGSC0003DMG400018280 Solanum tuberosum HOM05D000627 ORTHO05D000365 9.4e-38 160.6 128 66.4
Nitab4.5_0006117g0010 Nicotiana tabacum HOM05D000627 ORTHO05D000365 1.2e-37 160.2 136 64.0
Sopen01g044750 Solanum pennellii HOM05D000627 ORTHO05D000365 2.7e-37 159.1 128 66.4
Nitab4.5_0012308g0010 Nicotiana tabacum HOM05D000627 ORTHO05D000365 1.4e-36 156.8 136 64.0
Peaxi162Scf00071g00210 Petunia axillaris HOM05D000627 ORTHO05D000365 1.4e-36 156.8 135 64.4
Haze_15014 Corylus avellana HOM05D000627 ORTHO05D000365 6.3e-34 147.9 137 54.7
CiPaw.01G001200 Carya illinoinensis HOM05D000627 ORTHO05D000365 3.1e-33 145.6 145 51.0
QL03p011172 Quercus lobata HOM05D000627 ORTHO05D000365 3.1e-33 145.6 142 54.9
Cc02_g35910 Coffea canephora HOM05D000627 ORTHO05D000365 7.0e-33 144.4 136 54.4
Dinv24521 Davidia involucrata HOM05D000627 ORTHO05D000365 2.9e-31 139.0 137 52.6
Atru.chr12.1522 Acer truncatum HOM05D000627 ORTHO05D000365 3.8e-31 138.7 145 52.4
Oeu061909.1 Olea europaea HOM05D000627 ORTHO05D000365 2.5e-30 136.0 136 53.7
Hma1.2p1_0759F.1_g213840 Hydrangea macrophylla HOM05D000627 ORTHO05D000365 5.5e-30 134.8 137 50.4
SalBow5G1080 Salvia bowleyana HOM05D000627 ORTHO05D000365 7.2e-30 134.4 135 54.1
Actinidia17735 Actinidia chinensis HOM05D000627 ORTHO05D000365 9.4e-30 134.0 137 51.1
Thecc.05G330400 Theobroma cacao HOM05D000627 ORTHO05D000365 9.4e-30 134.0 143 54.5
Peaxi162Scf00194g00213 Petunia axillaris HOM05D000627 ORTHO05D000365 2.7e-29 132.5 105 66.7
Oeu062798.2 Olea europaea HOM05D000627 ORTHO05D000365 6.1e-29 131.3 137 54.0
Duzib177G0820 Durio zibethinus HOM05D000627 ORTHO05D000365 1.8e-28 129.8 143 53.8
Actinidia22852 Actinidia chinensis HOM05D000627 ORTHO05D000365 6.8e-28 127.9 137 49.6
Duzib128G1257 Durio zibethinus HOM05D000627 ORTHO05D000365 8.8e-28 127.5 143 52.4
CSS0000158 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 2.0e-27 126.3 138 53.6
FAN09G4740 Fragaria x ananassa HOM05D000627 ORTHO05D000365 4.4e-27 125.2 164 43.3
vmacro01664 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 9.8e-27 124.0 139 47.5
FvH4_6g08610 Fragaria vesca HOM05D000627 ORTHO05D000365 2.2e-26 122.9 136 47.8
FAN14G2970 Fragaria x ananassa HOM05D000627 ORTHO05D000365 2.2e-26 122.9 136 47.8
Nn4g25302 Nelumbo nucifera HOM05D000627 ORTHO05D000365 2.2e-26 122.9 137 48.2
Ciclev10027890m.g Citrus clementina HOM05D000627 ORTHO05D000365 2.8e-26 122.5 137 49.6
Rhsim11G0106200 Rhododendron simsii HOM05D000627 ORTHO05D000365 3.7e-26 122.1 138 47.8
RcHm_v2.0_Chr3g0458701 Rosa chinensis HOM05D000627 ORTHO05D000365 4.8e-26 121.7 136 46.3
Prupe.6G303500 Prunus persica HOM05D000627 ORTHO05D000365 8.3e-26 120.9 137 49.6
FAN05G0854 Fragaria x ananassa HOM05D000627 ORTHO05D000365 1.1e-25 120.6 136 47.1
FAN02G1668 Fragaria x ananassa HOM05D000627 ORTHO05D000365 1.8e-25 119.8 136 47.8
Manes.09G181800 Manihot esculenta HOM05D000627 ORTHO05D000365 3.1e-25 119.0 138 47.8
MSTRG.16434 Avicennia marina HOM05D000627 ORTHO05D000365 1.2e-24 117.1 138 50.0
Potri.005G001800 Populus trichocarpa HOM05D000627 ORTHO05D000365 2.0e-24 116.3 138 47.1
MD12G1199000 Malus domestica HOM05D000627 ORTHO05D000365 7.7e-24 114.4 138 45.7
CSS0047972 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 1.0e-23 114.0 137 48.2
Gohir.D11G286100 Gossypium hirsutum HOM05D000627 ORTHO05D000365 2.9e-23 112.5 125 48.8
Lj5A317T24 Lonicera japonica HOM05D000627 ORTHO05D000365 2.9e-23 112.5 136 44.9
Rhsim05G0124000 Rhododendron simsii HOM05D000627 ORTHO05D000365 3.8e-23 112.1 137 45.3
Gorai.007G309400 Gossypium raimondii HOM05D000627 ORTHO05D000365 5.0e-23 111.7 125 49.6
Eucgr.H01336 Eucalyptus grandis HOM05D000627 ORTHO05D000365 6.5e-23 111.3 137 44.5
MD04G1185100 Malus domestica HOM05D000627 ORTHO05D000365 6.5e-23 111.3 138 45.7
Nn3g21980 Nelumbo nucifera HOM05D000627 ORTHO05D000365 1.1e-22 110.5 136 43.4
vmacro19795 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 1.9e-22 109.8 137 45.3
Manes.08G107100 Manihot esculenta HOM05D000627 ORTHO05D000365 2.5e-22 109.4 136 45.6
CsaV3_2G007370 Cucumis sativus L. HOM05D000627 ORTHO05D000365 3.2e-22 109.0 144 43.8
Glyma.10G142600 Glycine max HOM05D000627 ORTHO05D000365 1.6e-21 106.7 142 45.8
MSTRG.5169 Avicennia marina HOM05D000627 ORTHO05D000365 2.1e-21 106.3 139 46.0
Potri.013G001300 Populus trichocarpa HOM05D000627 ORTHO05D000365 2.1e-21 106.3 138 47.8
TAR633G0207 Trochodendron aralioides HOM05D000627 ORTHO05D000365 2.8e-21 105.9 137 43.8
COL.COLO4_05481 Corchorus olitorius HOM05D000627 ORTHO05D000365 3.6e-21 105.5 127 47.2
Glyma.20G091200 Glycine max HOM05D000627 ORTHO05D000365 1.4e-20 103.6 141 45.4
Sc16g0009430 Simmondsia chinensis HOM05D000627 ORTHO05D000365 1.4e-20 103.6 139 44.6
Migut.B00888 Erythranthe guttata HOM05D000627 ORTHO05D000365 2.3e-20 102.8 123 52.8
ClCG02G014630 Citrullus lanatus HOM05D000627 ORTHO05D000365 3.0e-20 102.4 141 43.3
MBI19_g04827_MAGBIO Magnolia biondii HOM05D000627 ORTHO05D000365 8.8e-20 100.9 138 40.6
PGR083G1143 Punica granatum HOM05D000627 ORTHO05D000365 1.2e-19 100.5 145 42.1
MELO3C031303.2 Cucumis melo HOM05D000627 ORTHO05D000365 1.5e-19 100.1 154 39.6
AUR62000483 Chenopodium quinoa HOM05D000627 ORTHO05D000365 4.4e-19 98.6 136 39.7
Hund07268 Selenicereus undatus HOM05D000627 ORTHO05D000365 4.4e-19 98.6 129 40.3
AUR62006825 Chenopodium quinoa HOM05D000627 ORTHO05D000365 7.5e-19 97.8 136 39.7
Medtr1g084980 Medicago truncatula HOM05D000627 ORTHO05D000365 2.2e-18 96.3 161 42.2
Sed0026237 Sechium edule HOM05D000627 ORTHO05D000365 2.2e-18 96.3 145 39.3
Hund21826 Selenicereus undatus HOM05D000627 ORTHO05D000365 4.9e-18 95.1 137 41.6
Eucgr.B01825 Eucalyptus grandis HOM05D000627 ORTHO05D000365 8.3e-18 94.4 142 44.4
MBI18_g03843_MAGBIO Magnolia biondii HOM05D000627 ORTHO05D000365 9.2e-17 90.9 146 38.4
Lj5A302T14 Lonicera japonica HOM05D000627 ORTHO05D000365 1.2e-16 90.5 105 44.8
Phvul.007G206000 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 1.6e-16 90.1 140 40.7
Psat6g155920 Pisum sativum HOM05D000627 ORTHO05D000365 1.6e-16 90.1 144 43.1
EL10Ac4g09570 Beta vulgaris HOM05D000627 ORTHO05D000365 2.0e-16 89.7 137 39.4
VMungo0720G1779 Vigna mungo HOM05D000627 ORTHO05D000365 2.0e-16 89.7 142 40.8
TPR.G34901 Trifolium pratense HOM05D000627 ORTHO05D000365 3.5e-16 89.0 146 41.8
Ca_10208_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 4.5e-16 88.6 144 38.9
Glyma.03G227800 Glycine max HOM05D000627 ORTHO05D000365 4.5e-16 88.6 138 41.3
THA.LOC104823710 Tarenaya hassleriana HOM05D000627 ORTHO05D000365 4.5e-16 88.6 141 41.8
DCAR_029297 Daucus carota HOM05D000627 ORTHO05D000365 2.9e-15 85.9 138 41.3
Sed0011745 Sechium edule HOM05D000627 ORTHO05D000365 2.9e-15 85.9 142 40.1
Ah.06g190790 Amaranthus hybridus HOM05D000627 ORTHO05D000365 3.8e-15 85.5 137 38.0
TAR365G1241 Trochodendron aralioides HOM05D000627 ORTHO05D000365 3.8e-15 85.5 137 38.0
PGR031G0109 Punica granatum HOM05D000627 ORTHO05D000365 5.0e-15 85.1 137 38.7
GSVIVG01031338001 Vitis vinifera HOM05D000627 ORTHO05D000365 8.6e-15 84.3 84 54.8
arahy.Tifrunner.gnm1.ann1.ILFA61 Arachis hypogaea HOM05D000627 ORTHO05D000365 1.1e-14 84.0 143 38.5
ECA234G3746 Erigeron canadensis HOM05D000627 ORTHO05D000365 1.1e-14 84.0 137 42.3
Glyma.19G224700 Glycine max HOM05D000627 ORTHO05D000365 1.5e-14 83.6 143 38.5
Lj5g0002964 Lotus japonicus HOM05D000627 ORTHO05D000365 1.5e-14 83.6 143 37.8
arahy.Tifrunner.gnm1.ann1.IC82WL Arachis hypogaea HOM05D000627 ORTHO05D000365 1.9e-14 83.2 143 38.5
Lsat_1_v5_gn_5_149161 Lactuca sativa HOM05D000627 ORTHO05D000365 5.6e-14 81.6 136 41.2
Lalb_Chr06g0167261 Lupinus albus HOM05D000627 ORTHO05D000365 5.6e-14 81.6 144 38.9
Cfa011945 Carpinus fangiana HOM05D000627 ORTHO05D000365 7.3e-14 81.3 129 38.8
Lalb_Chr02g0147481 Lupinus albus HOM05D000627 ORTHO05D000365 9.5e-14 80.9 144 37.5
Sabra13G0001100 Salix brachista HOM05D000627 ORTHO05D000365 1.2e-13 80.5 138 42.8
HanXRQChr16g0513391 Helianthus annuus HOM05D000627 ORTHO05D000365 2.8e-13 79.3 137 40.1
HanXRQChr10g0294441 Helianthus annuus HOM05D000627 ORTHO05D000365 8.0e-13 77.8 136 38.2
arahy.Tifrunner.gnm1.ann1.SDDU5A Arachis hypogaea HOM05D000627 ORTHO05D000365 1.0e-12 77.4 146 38.4
Actinidia11692 Actinidia chinensis HOM05D000627 ORTHO05D000365 1.8e-12 76.6 87 43.7
Carub.0001s0887 Capsella rubella HOM05D000627 ORTHO05D000365 2.3e-12 76.3 122 42.6
Thhalv10007343m.g Eutrema salsugineum HOM05D000627 ORTHO05D000365 3.0e-12 75.9 120 40.0
THA.LOC104820437 Tarenaya hassleriana HOM05D000627 ORTHO05D000365 3.0e-12 75.9 129 37.2
VMungo1383G0894 Vigna mungo HOM05D000627 ORTHO05D000365 5.2e-12 75.1 120 40.0
CARHR009500 Cardamine hirsuta HOM05D000627 ORTHO05D000365 1.5e-11 73.6 121 38.0
AT1G09530 Arabidopsis thaliana HOM05D000627 ORTHO05D000365 2.0e-11 73.2 119 38.7
Dinv30953 Davidia involucrata HOM05D000627 ORTHO05D000365 2.0e-11 73.2 139 37.4
arahy.Tifrunner.gnm1.ann1.03LME3 Arachis hypogaea HOM05D000627 ORTHO05D000365 2.6e-11 72.8 146 37.0
Duzib106G0443 Durio zibethinus HOM05D000627 ORTHO05D000365 3.4e-11 72.4 96 47.9
Medtr7g111320 Medicago truncatula HOM05D000627 ORTHO05D000365 4.4e-11 72.0 141 32.6
AL1G20050 Arabidopsis lyrata HOM05D000627 ORTHO05D000365 7.5e-11 71.2 121 38.0
Sp1g08130 Schrenkiella parvula HOM05D000627 ORTHO05D000365 9.8e-11 70.9 121 39.7
BraA06t23833Z Brassica rapa HOM05D000627 ORTHO05D000365 1.3e-10 70.5 118 37.3
A06p06220 Brassica napus HOM05D000627 ORTHO05D000365 1.7e-10 70.1 118 36.4
unitig_578.g15947 Utricularia gibba HOM05D000627 ORTHO05D000365 2.2e-10 69.7 128 33.6
CDE01G0138 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 3.7e-10 68.9 129 34.1
TPR.G1653 Trifolium pratense HOM05D000627 ORTHO05D000365 8.3e-10 67.8 144 35.4
ATR0796G291 Amborella trichopoda HOM05D000627 ORTHO05D000365 5.4e-09 65.1 122 36.9
SGA_v2.0_scaffold279G46773 Striga asiatica HOM05D000627 ORTHO05D000365 7.0e-09 64.7 139 38.8
C05p07530 Brassica napus HOM05D000627 ORTHO05D000365 2.7e-08 62.8 118 35.6
BolC5t29507H Brassica oleracea HOM05D000627 ORTHO05D000365 2.7e-08 62.8 118 35.6
unitig_8.g4509 Utricularia gibba HOM05D000627 ORTHO05D000365 3.5e-08 62.4 116 34.5
Aa31LG1G5530 Aethionema arabicum HOM05D000627 ORTHO05D000365 5.9e-08 61.6 141 34.8
SalBow4G2758 Salvia bowleyana HOM05D000627 ORTHO05D000365 8.6e-07 57.8 140 36.4
HPP92_012760 Vanilla planifolia HOM05D000627 ORTHO05D000365 8.6e-07 57.8 109 36.7
Aqoxy2G02438 Aquilegia oxysepala HOM05D000627 ORTHO05D000365 1.9e-06 56.6 127 33.9
A09p65460 Brassica napus HOM05D000627 ORTHO05D000365 5.6e-06 55.1 104 34.6
PSO170G0649 Papaver somniferum HOM05D000627 ORTHO05D000365 5.6e-06 55.1 125 36.8
PSO357G0182 Papaver somniferum HOM05D000627 ORTHO05D000365 9.5e-06 54.3 127 37.8


User provided reference genes

Program Settings