Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000076g0260 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.0e-107 393.3 184 100.0
Nitab4.5_0000259g0310 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.3e-99 365.5 195 89.7
Nitab4.5_0001171g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.6e-98 362.1 195 88.2
Nitab4.5_0001781g0230 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.3e-97 357.5 195 88.2
Nitab4.5_0000483g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.0e-96 354.0 195 86.7
Nitab4.5_0000571g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.8e-95 350.5 195 87.7
Nitab4.5_0002991g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.8e-95 350.5 195 86.7
Nitab4.5_0002094g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.7e-94 349.4 195 84.6
Nitab4.5_0000378g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.0e-94 347.8 195 84.1
Nitab4.5_0021418g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.6e-94 347.1 195 84.1
Nitab4.5_0001360g0140 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-93 346.3 195 84.6
Nitab4.5_0001263g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.3e-93 345.1 195 86.7
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 4.3e-93 344.7 192 85.4
Nitab4.5_0000197g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.6e-93 344.4 195 83.6
Nitab4.5_0000687g0070 Nicotiana tabacum HOM05D006502 ORTHO05D004350 2.3e-91 339.0 195 83.6
Nitab4.5_0026746g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.0e-91 338.2 195 84.6
Nitab4.5_0000108g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.7e-89 331.6 185 87.0
Nitab4.5_0000131g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.4e-89 330.9 195 82.6
Nitab4.5_0000201g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.4e-89 330.9 195 83.1
Nitab4.5_0002995g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.4e-89 330.9 195 83.1
Nitab4.5_0003338g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005969 6.4e-89 330.9 195 81.0
Nitab4.5_0028560g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-88 330.1 195 82.6
Nitab4.5_0002192g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.0e-88 327.4 195 81.5
Nitab4.5_0000621g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-87 326.6 183 86.3
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-87 326.2 173 87.3
Nitab4.5_0000492g0040 Nicotiana tabacum HOM05D000104 ORTHO05D005604 1.9e-85 319.3 176 86.4
Nitab4.5_0005403g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.5e-85 318.9 192 81.2
Nitab4.5_0007992g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-84 315.8 195 80.0
Nitab4.5_0003863g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.4e-83 313.2 195 77.9
Nitab4.5_0000628g0060 Nicotiana tabacum HOM05D001563 ORTHO05D001956 8.9e-83 310.5 170 87.6
Nitab4.5_0002208g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.6e-82 308.9 195 79.0
Nitab4.5_0000062g0640 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.2e-81 305.8 179 83.8
Nitab4.5_0000622g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.4e-81 304.3 184 79.3
Nitab4.5_0010223g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-80 303.5 195 77.4
Nitab4.5_0007329g0060 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.4e-80 302.4 195 79.0
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 3.2e-80 302.0 190 77.4
Nitab4.5_0002388g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.1e-80 301.6 195 76.9
Nitab4.5_0001677g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.2e-80 300.4 184 76.1
Nitab4.5_0001615g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-79 300.1 171 84.2
Nitab4.5_0000125g0140 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.0e-78 297.0 195 77.9
Nitab4.5_0000171g0390 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.1e-78 294.7 199 76.4
Nitab4.5_0004743g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.1e-78 294.7 195 74.4
Nitab4.5_0001977g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.8e-76 288.9 184 78.8
Nitab4.5_0007502g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.6e-76 288.5 171 81.9
Nitab4.5_0001338g0090 Nicotiana tabacum HOM05D005293 ORTHO05D006764 1.1e-75 287.0 162 85.2
Nitab4.5_0001025g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.2e-75 284.6 162 82.1
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 1.2e-74 283.5 156 87.8
Nitab4.5_0002468g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.2e-73 279.3 183 76.5
Nitab4.5_0001360g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.4e-72 275.8 195 73.3
Nitab4.5_0004344g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.1e-72 275.0 195 69.2
Nitab4.5_0013274g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.7e-71 272.3 196 70.4
Nitab4.5_0008976g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.8e-71 270.8 163 78.5
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.3e-70 270.0 160 81.9
Nitab4.5_0025728g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.7e-70 269.6 195 71.3
Nitab4.5_0001526g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-69 266.5 162 80.9
Nitab4.5_0010800g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-68 263.1 195 67.2
Nitab4.5_0007572g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.8e-67 259.6 141 87.9
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 7.1e-64 247.7 139 84.2
Nitab4.5_0000564g0290 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-63 246.5 160 76.9
Nitab4.5_0000519g0410 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.6e-63 245.0 141 82.3
Nitab4.5_0002649g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-61 240.4 195 65.1
Nitab4.5_0006695g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.1e-60 234.2 190 67.9
Nitab4.5_0010800g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.0e-59 230.7 195 61.0
Nitab4.5_0002481g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-58 229.9 180 66.1
Nitab4.5_0000401g0100 Nicotiana tabacum HOM05D002342 ORTHO05D002407 2.0e-58 229.6 185 64.3
Nitab4.5_0002405g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.2e-57 226.1 129 85.3
Nitab4.5_0001180g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.4e-56 221.5 141 76.6
Nitab4.5_0000692g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-55 220.3 124 84.7
Nitab4.5_0000053g0210 Nicotiana tabacum HOM05D000323 ORTHO05D000201 1.6e-55 219.9 129 82.2
Nitab4.5_0003553g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.0e-54 217.2 191 60.2
Nitab4.5_0001756g0220 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.9e-54 215.3 152 72.4
Nitab4.5_0000100g0240 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.9e-53 213.0 183 65.0
Nitab4.5_0000314g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.9e-53 213.0 152 71.7
Nitab4.5_0011782g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.3e-53 212.2 129 78.3
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 9.6e-53 210.7 126 80.2
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 1.3e-52 210.3 141 71.6
Nitab4.5_0001070g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.8e-52 208.4 122 81.1
Nitab4.5_0005492g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-51 207.2 147 72.8
Nitab4.5_0006854g0070 Nicotiana tabacum HOM05D002659 ORTHO05D002940 5.3e-51 204.9 183 61.7
Nitab4.5_0020510g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.6e-50 202.6 144 71.5
Nitab4.5_0007378g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.7e-49 199.9 111 87.4
Nitab4.5_0005539g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-47 193.4 183 59.0
Nitab4.5_0003274g0040 Nicotiana tabacum HOM05D002317 ORTHO05D002420 2.1e-47 193.0 186 61.3
Nitab4.5_0005671g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.7e-47 192.6 129 76.7
Nitab4.5_0004690g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.0e-46 190.7 164 62.8
Nitab4.5_0000195g0130 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.3e-46 189.5 93 95.7
Nitab4.5_0001127g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.3e-46 189.5 93 96.8
Nitab4.5_0000899g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.0e-46 189.1 93 95.7
Nitab4.5_0000428g0510 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.7e-46 187.6 92 94.6
Nitab4.5_0004809g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.9e-45 186.4 136 71.3
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 2.5e-45 186.0 104 84.6
Nitab4.5_0001705g0030 Nicotiana tabacum HOM05D000207 ORTHO05D007704 2.5e-45 186.0 151 63.6
Nitab4.5_0014844g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.4e-45 184.5 148 66.2
Nitab4.5_0000684g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.6e-42 176.0 90 88.9
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.4e-42 175.6 87 93.1
Nitab4.5_0001770g0130 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.6e-42 174.5 84 97.6
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.0e-41 174.1 92 84.8
Nitab4.5_0007366g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.2e-41 172.9 93 84.9
Nitab4.5_0008150g0010 Nicotiana tabacum HOM05D001348 ORTHO05D008393 9.3e-40 167.5 88 90.9
Nitab4.5_0004063g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-39 166.4 196 53.1
Nitab4.5_0002043g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.5e-39 165.6 183 51.9
Nitab4.5_0004347g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.6e-39 165.2 91 87.9
Nitab4.5_0000175g0200 Nicotiana tabacum HOM05D002702 ORTHO05D003416 5.1e-38 161.8 82 92.7
Nitab4.5_0000518g0060 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.7e-38 161.0 81 88.9
Nitab4.5_0000476g0170 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-32 144.1 153 57.5
Nitab4.5_0000472g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-31 140.6 69 94.2
Nitab4.5_0009676g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.3e-30 137.1 73 84.9
Nitab4.5_0005345g0040 Nicotiana tabacum HOM05D002920 ORTHO05D003118 1.9e-29 133.3 71 88.7
Nitab4.5_0002244g0150 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-28 130.2 84 75.0
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.8e-28 129.4 83 74.7
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 8.2e-28 127.9 132 48.5
Nitab4.5_0001770g0120 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.0e-26 123.2 59 96.6
Nitab4.5_0001756g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.2e-25 119.8 91 67.0
Nitab4.5_0007154g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.5e-25 117.9 59 89.8
Nitab4.5_0000416g0020 Nicotiana tabacum HOM05D000452 ORTHO05D000647 1.4e-24 117.1 143 52.4
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 1.9e-24 116.7 75 77.3
Nitab4.5_0005918g0080 Nicotiana tabacum HOM05D002868 ORTHO05D007704 1.8e-19 100.1 55 81.8
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 4.8e-12 75.5 166 27.1
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 9.1e-11 71.2 131 29.8
Nitab4.5_0001756g0250 Nicotiana tabacum HOM05D004412 ORTHO05D005316 2.6e-10 69.7 38 84.2
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.0e-09 67.8 165 27.3
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 2.9e-09 66.2 154 27.3
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.9e-08 63.5 37 81.1
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 4.2e-08 62.4 167 25.1
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 5.5e-08 62.0 124 29.0
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 5.5e-08 62.0 161 27.3
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 7.2e-08 61.6 196 26.5
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 9.4e-08 61.2 111 31.5
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 9.4e-08 61.2 157 28.7
CAN.G85.1 Capsicum annuum HOM05D001433 ORTHO05D005172 1.6e-07 60.5 66 45.5
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.6e-07 60.5 154 29.2
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.1e-07 60.1 137 29.9
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 2.1e-07 60.1 160 26.2
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 3.6e-07 59.3 150 26.7
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.6e-07 59.3 150 26.7
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.6e-07 59.3 150 26.7
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.6e-07 59.3 150 26.7
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 8.0e-07 58.2 154 26.0
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.0e-07 58.2 100 26.0
Nitab4.5_0000056g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.0e-06 56.2 29 93.1
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 3.0e-06 56.2 156 28.8
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 4.0e-06 55.8 122 29.5
Nitab4.5_0004347g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.2e-06 55.5 31 77.4
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.2e-06 55.5 123 29.3
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.2e-06 55.5 123 26.8


User provided reference genes

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