Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.1e-191 670.2 338 100.0
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 3.7e-175 618.2 341 91.2
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 4.8e-175 617.8 341 90.9
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.2e-175 617.1 313 98.7
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 3.8e-164 581.6 337 87.5
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.2e-162 576.6 316 91.1
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 7.0e-150 534.3 339 78.5
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 2.0e-149 532.7 341 78.3
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 1.2e-146 523.5 341 76.5
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 2.1e-146 522.7 344 75.6
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 4.7e-146 521.5 329 77.8
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 8.0e-146 520.8 342 75.7
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 3.0e-145 518.8 330 77.3
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 4.4e-144 515.0 333 76.9
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 9.7e-144 513.8 330 77.6
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.7e-143 511.9 344 74.4
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.8e-142 509.6 331 76.4
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.5e-141 505.0 329 76.0
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 4.5e-141 505.0 333 76.0
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.7e-140 503.1 325 76.0
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.7e-140 503.1 324 78.1
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 3.8e-140 501.9 324 77.8
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 5.0e-140 501.5 325 76.3
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 8.5e-140 500.7 330 76.7
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.1e-139 500.4 323 76.5
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 2.5e-139 499.2 330 76.4
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.5e-139 499.2 323 76.2
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.2e-139 498.8 338 75.4
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.2e-139 498.8 327 76.1
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 7.2e-139 497.7 334 74.6
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 9.4e-139 497.3 324 75.9
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 1.2e-138 496.9 326 75.2
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 3.6e-138 495.4 331 76.1
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 3.6e-138 495.4 348 71.0
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.0e-137 493.8 328 74.4
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 1.4e-137 493.4 332 75.6
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 1.8e-137 493.0 350 72.6
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 2.3e-137 492.7 334 74.0
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 2.3e-137 492.7 325 74.8
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 5.2e-137 491.5 326 76.1
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.2e-137 491.5 326 74.2
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.2e-136 490.3 325 75.1
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.2e-136 490.3 326 74.8
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.5e-136 490.0 330 75.2
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.5e-136 490.0 328 73.2
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 2.0e-136 489.6 341 73.3
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.7e-136 488.0 339 73.2
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 5.7e-136 488.0 311 78.8
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 7.5e-136 487.6 371 67.7
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 9.8e-136 487.3 323 74.3
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 9.8e-136 487.3 327 73.7
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.7e-135 486.5 330 75.5
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 8.3e-135 484.2 332 73.8
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 8.3e-135 484.2 333 72.4
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.8e-134 483.0 333 72.4
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.8e-134 483.0 333 72.4
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.8e-134 483.0 339 72.9
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.1e-134 482.3 330 73.6
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 4.1e-134 481.9 319 73.4
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 5.9e-133 478.0 319 72.7
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 5.9e-133 478.0 331 74.6
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.7e-132 476.5 323 73.1
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 6.5e-132 474.6 338 70.4
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 6.5e-132 474.6 353 70.3
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.5e-131 472.6 331 71.6
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.5e-131 472.6 328 71.3
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 2.5e-131 472.6 336 69.6
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 4.2e-131 471.9 319 72.1
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.2e-131 471.9 325 72.9
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 5.5e-131 471.5 322 72.4
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 9.5e-131 470.7 323 72.4
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.2e-130 470.3 325 71.7
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.6e-130 469.9 306 77.8
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.6e-130 469.9 325 71.7
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.1e-130 469.5 320 73.1
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 3.6e-130 468.8 323 73.1
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 3.6e-130 468.8 313 73.8
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 3.6e-130 468.8 322 72.4
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 3.6e-130 468.8 319 71.8
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 4.7e-130 468.4 319 70.8
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 4.7e-130 468.4 335 70.4
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 4.7e-130 468.4 329 70.5
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 6.1e-130 468.0 333 69.4
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 8.0e-130 467.6 330 70.0
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 8.0e-130 467.6 306 76.5
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.0e-129 467.2 332 68.1
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 1.4e-129 466.8 373 67.0
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.0e-129 465.7 334 69.5
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 4.0e-129 465.3 329 69.9
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 5.2e-129 464.9 320 70.9
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 6.8e-129 464.5 321 72.3
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 8.8e-129 464.2 340 69.1
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.2e-128 463.8 326 70.2
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.5e-128 463.4 331 69.8
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 1.5e-128 463.4 320 70.6
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.5e-128 463.4 332 70.2
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 2.0e-128 463.0 331 69.8
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.6e-128 462.6 321 72.6
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 4.4e-128 461.8 358 65.1
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 5.7e-128 461.5 325 70.8
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 7.5e-128 461.1 338 69.5
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 3.7e-127 458.8 326 70.9
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 4.9e-127 458.4 334 69.2
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 1.1e-126 457.2 329 68.1
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 1.4e-126 456.8 321 71.7
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.8e-126 456.4 335 69.0
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.8e-126 456.4 322 69.9
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.8e-126 456.4 325 70.5
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 3.1e-126 455.7 304 74.3
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 4.1e-126 455.3 332 69.9
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 5.4e-126 454.9 321 71.7
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 1.6e-125 453.4 313 73.8
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.5e-125 452.2 320 70.3
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 7.7e-125 451.1 308 73.1
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.1e-123 447.2 320 69.4
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.5e-123 446.0 317 70.7
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 5.2e-121 438.3 322 68.9
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.5e-120 436.8 343 66.2
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 4.4e-120 435.3 315 69.8
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 2.2e-119 433.0 337 65.6
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.2e-119 433.0 390 59.2
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 5.0e-116 421.8 320 68.8
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.6e-114 416.8 534 46.6
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 2.8e-114 416.0 330 65.2
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 3.1e-113 412.5 265 76.2
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 2.2e-111 406.4 312 63.8
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 3.2e-110 402.5 210 96.2
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 1.7e-108 396.7 258 75.2
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 1.8e-105 386.7 265 74.0
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 7.5e-104 381.3 333 60.1
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 2.9e-103 379.4 263 73.0
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.7e-101 372.9 335 59.1
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.8e-97 360.1 315 58.4
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 6.0e-93 345.1 316 55.4
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 3.1e-89 332.8 227 74.4
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 8.9e-89 331.3 206 79.1
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 4.4e-88 328.9 287 63.1
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.4e-86 323.9 207 73.9
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.4e-86 323.2 204 77.5
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 2.7e-85 319.7 288 56.2
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 3.3e-83 312.8 214 75.7
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 7.6e-80 301.6 351 51.9
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 7.1e-70 268.5 161 82.0
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 3.1e-65 253.1 379 41.4
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.5e-64 249.2 162 73.5
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.5e-61 239.6 170 72.4
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.5e-61 239.6 162 72.8
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 5.7e-59 232.3 160 73.1
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 3.1e-57 226.5 218 58.3
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.1e-57 226.5 161 70.8
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.0e-52 211.5 251 47.8
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 6.5e-47 192.2 327 41.6
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 3.3e-43 179.9 122 71.3
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 9.4e-38 161.8 193 49.2
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 4.5e-32 142.9 112 67.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.2e-31 140.6 330 31.5
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 6.7e-28 129.0 253 34.8
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 3.3e-27 126.7 385 30.6
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.7e-27 125.9 114 54.4
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.6e-24 117.9 61 88.5
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 7.2e-22 109.0 120 50.0
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 6.3e-18 95.9 57 77.2
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 1.0e-15 88.6 90 50.0
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 3.3e-14 83.6 63 68.3
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.3e-14 83.6 65 66.2
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.5e-14 82.8 56 73.2
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 5.7e-11 72.8 49 69.4
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 1.3e-07 61.6 108 37.0
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 2.5e-06 57.4 57 52.6


User provided reference genes

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